snap_masked-scaffold475_size161908-processed-gene-0.11-mRNA-1, snap_masked-scaffold475_size161908-processed-gene-0.11-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold475_size161908-processed-gene-0.11-mRNA-1
Unique Namesnap_masked-scaffold475_size161908-processed-gene-0.11-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold475_size161908supercontigscaffold475_size161908:147607..147933 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
neuronal calcium sensor 2-likesnap_masked-scaffold475_size161908-processed-gene-0.11Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold475_size161908-processed-gene-0.11-mRNA-1:exon:135snap_masked-scaffold475_size161908-processed-gene-0.11-mRNA-1:exon:135Tigriopus kingsejongensisexon
snap_masked-scaffold475_size161908-processed-gene-0.11-mRNA-1:cdssnap_masked-scaffold475_size161908-processed-gene-0.11-mRNA-1:cdsTigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2002463auto2002463Tigriopus kingsejongensispolypeptide
Tk07979Tk07979Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk07979

>Tk07979 ID=Tk07979|Name=Tk07979|organism=Tigriopus kingsejongensis|type=polypeptide|length=108bp
MGCIKSKQGLSQEDLEFLRAHTRYDENTIKEWYKGFKQDCPNGRLTPVKF
VDMYKMFFPSGNAEQFCDHVFRTFDTDKNGYIDFKEFLLAIDVTSAGTAE
EKLKWAFR
back to top

mRNA from alignment at scaffold475_size161908:147607..147933+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold475_size161908-processed-gene-0.11-mRNA-1 ID=snap_masked-scaffold475_size161908-processed-gene-0.11-mRNA-1|Name=snap_masked-scaffold475_size161908-processed-gene-0.11-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=327bp|location=Sequence derived from alignment at scaffold475_size161908:147607..147933+ (Tigriopus kingsejongensis)
ATGGGCTGCATCAAGAGCAAGCAGGGTCTGTCCCAAGAGGATCTGGAATT
CCTCCGAGCACACACGCGCTACGACGAGAACACCATCAAAGAGTGGTACA
AAGGTTTCAAACAGGACTGTCCCAATGGCCGACTCACGCCCGTCAAATTC
GTGGACATGTACAAGATGTTCTTTCCCTCCGGCAATGCCGAACAGTTCTG
CGACCACGTGTTCCGCACCTTCGATACCGACAAAAACGGCTACATTGACT
TCAAAGAGTTCTTGCTGGCCATCGACGTGACTAGCGCTGGCACCGCCGAG
GAGAAGCTCAAATGGGCATTCAGGTAG
back to top
Add to Basket