snap_masked-scaffold717_size107106-processed-gene-0.11-mRNA-1, snap_masked-scaffold717_size107106-processed-gene-0.11-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	snap_masked-scaffold717_size107106-processed-gene-0.11-mRNA-1
Unique Name	snap_masked-scaffold717_size107106-processed-gene-0.11-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold717_size107106	supercontig	scaffold717_size107106:4606..11686 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
PREDICTED: uncharacterized protein LOC100905314 partial	snap_masked-scaffold717_size107106-processed-gene-0.11	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold717_size107106-processed-gene-0.11-mRNA-1:exon:1559	snap_masked-scaffold717_size107106-processed-gene-0.11-mRNA-1:exon:1559	Tigriopus kingsejongensis	exon
snap_masked-scaffold717_size107106-processed-gene-0.11-mRNA-1:exon:1560	snap_masked-scaffold717_size107106-processed-gene-0.11-mRNA-1:exon:1560	Tigriopus kingsejongensis	exon
snap_masked-scaffold717_size107106-processed-gene-0.11-mRNA-1:exon:1561	snap_masked-scaffold717_size107106-processed-gene-0.11-mRNA-1:exon:1561	Tigriopus kingsejongensis	exon
snap_masked-scaffold717_size107106-processed-gene-0.11-mRNA-1:cds	snap_masked-scaffold717_size107106-processed-gene-0.11-mRNA-1:cds	Tigriopus kingsejongensis	exon
snap_masked-scaffold717_size107106-processed-gene-0.11-mRNA-1:cds	snap_masked-scaffold717_size107106-processed-gene-0.11-mRNA-1:cds-1955434	Tigriopus kingsejongensis	exon
snap_masked-scaffold717_size107106-processed-gene-0.11-mRNA-1:cds	snap_masked-scaffold717_size107106-processed-gene-0.11-mRNA-1:cds-1955435	Tigriopus kingsejongensis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto1955436	auto1955436	Tigriopus kingsejongensis	polypeptide
Tk08278	Tk08278	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold717_size107106:4606..11686-

protein sequence of Tk08278

>Tk08278 ID=Tk08278|Name=Tk08278|organism=Tigriopus kingsejongensis|type=polypeptide|length=326bp
MGKERSPIVLLILESFHGRTGTSNWSRLSTAGGRLTGGGSQNLCSFVFFG
ACNITGIKDDEAAFVAACAPCACLRASLPKEHYVLSIAQAPMEAVGLDLM
DVNAAAVITVLKDWFVELGGPRAIRTDGGPQFRTEFAAFCRSFDIVLEIS
SPYNSESNGLGEAAVKSAKHLLRKTTPVSFPEALQEWRNTPRVDGLSPSR
LFFGRRMRGRILHLPHLVPERPCSRKRPRLADSAGGRVLPPLVVGDQVRV
QDPASNEWVRTGVITEVVAHRRYRLTADSGASFVRNRRFLRKLVAGDVVG
PHAPTPVPAPTSAPAPAPPRRSQRQA

mRNA from alignment at scaffold717_size107106:4606..11686-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold717_size107106-processed-gene-0.11-mRNA-1 ID=snap_masked-scaffold717_size107106-processed-gene-0.11-mRNA-1|Name=snap_masked-scaffold717_size107106-processed-gene-0.11-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=7081bp|location=Sequence derived from alignment at scaffold717_size107106:4606..11686- (Tigriopus kingsejongensis)
ATGGGCAAAGAACGAAGTCCCATCGTTCTTCTTATCTTGGAATCATTCCA
CGGACGGACCGGGACATCCAATTGGTCCAGATTATCCACGGCGGGTGGAC
GCCTCACAGGGGGTGGTTCCCAGGTAGGTTCCAGGCGTTCTCCAAGCTCG
AGAACTTCCCGGTCAAACTCGTCAACTACTTCCACATAAAGGTCCACACA
GTCTTCCATTCTCTTCTCAACACCCACACCAGGCTGTAATAATAATCCAT
ACTGTGAAAAAGGCAGGAACTATTATAATTTTAAGAGAGCAAACCTAAAC
CAAGACATGTTTGGTCTTAAAATAAACAAATGAACATTTGACAGAGACAA
TCTAGCCTGAAATCATGGTCTTGCACCGGGAAAAACCGGTAAAACTGAGC
AAGAATTATAACCCCAACTATTATCCCACTAAACACTCTCCGACCTTGAA
ACTCCAAGTTTCTATAACTCAAAAAAAAGTGAGATTATTAATGGTCTTCT
AGATGAAGAGGAAGTATCTTGCACACAGGTCTTTTAATTATATGTCCCTT
GTCATTTTTAATGAAGACTTGCCGTATTCTATTATCTTGACCTCGACATA
TCTTATCAATAACTACCATCTTCCAAAAAACCCTAGGTTGTTGGTCATCT
AGCAGTACGACCAATTGTCCCTCGCTCAATTCTGGTTGATCTTTTAACCA
CTTACTTCTTGGATGTAGATCAGGTAGGAATTCGTTCATCAAACGTTTCC
AGAAATGATCTAAAGTGGATGTTAGGTACTTAAACCTGTCGTATAAATGT
AGTGGTTTGTCTAACGTTGGGCATAAAGAATGACCCCCTAACATTCCGAC
CAAAAAGTGGGCCGGCGTGAGAACGGGAACATCTTCAGTTTTTGAAGCCA
TTATCGGGCGTGAGTTTAAAAGGAACTCTATCTCATTGACAGCCGTTCTA
AACCATGTCAGATCTGCCTCCAAATACACAGATCTACTGTAAATGCCCGT
TTAAATGCTTTGACAACAATTTCAAAACATCCCCCAAAATGACTACCTGC
AGGTGGACTATATATCCATTTAATGCCATTCGATTTCTTATATCCAAACA
TGGTCATTTCCTCTAGCCGTAAAAAATCTATTCTCCTGAACATTTCAACC
AAGGCTGCGTCTGTAGATTTGAATGAAGAGTAGTTGTCGGAGACCATGCG
ATCTGGCACTCCTCTTCTACTGGAGAAGCAGCAAATAGCTTGATATACAT
CCTGTGTAGTCATACCTTCCGTCACTTCTAAATGAAGTGCTCTAGTTTGT
AGACAAGAGAATACCAGAACATACGCCTTTGGCCTTTCTCTCGATGTCCG
TGTACTCCTCAACTGCTTTATTGAAAAGCTTCCCGTGAAGTCCATACCCA
CAATTGCGAAGGCTCTCAAAGAATCTGAATAACGATAAGAGGGTAGGCTA
GCCATCATTGGAACATACGGTTGAGCTCTTGCTTTGACACATTCTACACA
AGTCCGTCTTGCCTTTCTTTCCAGCTTAAGCCAGGAATTATACAATGCTT
ATTAATCTCCGCTCTCATGGCATTAGAACCCAACGGATGTTTCATATCCT
TGTGTAAATGATAGACATAAAGGATAGTAATTGGGTGATTAGAAGAGAGA
ATTACTGGCCATCGTACTTCAGATGGTAGGAGATTTGAATTCTCATGTCT
CGATCTGGCCCGGATCAAACCCAAACTATCCCTAACAGGTGAGAATTTAG
CTAAGGGATGCTTTTTAGGCAGAGACTCGAAGTCTAGATCTTGCCATTCC
CTCTGTGCCCACAAATAGATTAAGTTTAAAGTCATACGTACAACCCAACA
CATTTGATGAAGGCAACACAAATCTGAAGGCCTTCTGGGCGATTTCAGAT
CGTCCCGACTTGAAGAGAATCCAAGAGATTTGAATTCTCAACAAGAGAGA
AAATCTTCTTCTTAATATGAGCCAACCATCCCATAATGCCCCCACCGAAC
TTTTTGATATTAAGAACTGTCCGATATTGGAAGACTCTATTATGGAAAGC
ATGTTTAGGTTAATTCTTCTCTCCTTAACCGGATCATTTTCATCCCCATA
CTCGAGTTTTGTCTCCGGCCATGAAGCTATGGGCTCTAGCAGAAATGCCG
GACCCTCAAGAAAAACTTTATTTCCAGGGATTTCGGAGAGCTTTAAACCT
CTTGAAGGGATGTCAGCCGGGTTTAATACCCCAGGTACATGCCTCCATTG
TTCTGGTTTTGAATTCGCTTGAATATCGCCACATCTATTTGCAATGAAAG
TTTTTAGATGCTTCGATGGACTATTGATCCAATACAACACATTCTTACTA
TCTGTCCAATAAGTGATCTCATGAAGACCTTTCCCCAGCACTTTTCTAAT
TTGTAACCACCATTCCATCCCTAAATGTGCAGCACACAACTCTAGGCGAG
CAATATTTCATCGGAGTTACTCGACTCTTGCAGAATAATAGCGTGCTATT
TCGAAACTCGTGTTCANNNNNNNNNNNNNNNNNNNNNGAAACTTTTGCCC
AATCCACTACCAACACGACTATTCCAAGACGTCAGCTCCGACTTATTCGA
ATATGGAGGACTTCATTTCATGGTTCATATTGTGCTGTTACAGAAATATC
GTGTGTTTTATCCCAAGGAGAATTATACCATTCTCCATTGTTAATGCCTA
TTTCTTCTGGGGTTCTTCCTGGAGTTCTTTGCTCACTTCTTGAAAGTGTG
TATGATATCCAACCCGTTAAATTACCTTGTGTTTTTCTTGCTAAAAACTC
TAAGCCGTATGCTCTTGCTTCTCCTGTAAGTAAAATTTGTTCGACGGCAT
CATTTGCTATTAAATCTGCGTCATCCACATAATCCAATCTATTTTGTACA
GTTTTGTAATAGCTTTCAATTTCTAGCGAAAACTCATCAAATGCCTTAAA
ATATCCTACAGCTACTTGGTCTGCTAATTGTGGATCTATAAATTTTCCAC
TTGGCGCATAAATATCAAAAGGAGTAGGAGAGGTGGTATTACTTATTAAG
TGAATGTATTGTGCGGTTCTATTATAGCTTGCTTTAACTGATGATTCATC
TGTTAATTGGTAGGCAATAGCAAAGCGAGGTTCTAAATTTGCGAAAGCTT
TTATAGTTTCAGTTCTATCAAAACTAACAGTGCCTATTGCGTCTGCTTTT
TGATAAATGTCTAAATCTTCATTATAAGCAATAGGATTGTCATTTTCATA
TACATTTAATTCGTCTTGTCCTAATCTATTAAATGTTGATAAACGCAATC
CTGCTTGAATGTTTAGCTTATCAGTTATTTCAAATTCACCATCTACATAT
AAGGCATTTTCAAAAGCATATTTTTCGGTAAGTCTTAATGGGTTTATTCC
TGAAGTTTCTGTGGTGGGAGTTATTTCGCCAGGATTAAAAGTGTAATATT
GACTGTTTATACCGTAGCGTAGTTTTGACTTTTCTGAAGCAAAATGGGTG
AAATCATATTTTACATTAAAATTTTGAATACCACTATCAAACTGAAATTC
TACAAATTTTAATTCTAAGCCATAATAATAATCGGAGTAAATAACCGAAA
GATTACTAAATAGCTTATCTGAAAATAAGTGATTCCATCTTAAGTTTACG
GTAGTATTTCCGAAGAGATTCGCAAAACTATCTGAAATAGAAAACTTATC
ACGTCCAAAATAACCAGAAAGGAATAATCTATTTTTGTCATCAATATTGT
AGCTAATTTTTGTGTTTAGGTCATAAAAATATGCACTATTATCATTGTCA
AATAGCGGTAGAAATAAATGCGCATAACTGCTACGTCCTGCCAATAAAAA
AGACGCTTTATCTTTTACAATAGGACCTTCCACGAGTAATCTACTAGCAA
TAAGCCCTATTCCTCCGGTAGCTTTAAACTCTTTATTATTTCCATCTTTT
TGGTAAATATCTAGTACTGAGGAAACACGACCTCCATATCTGGCTGGTAT
TCCTCCTTTGTATAATGTTAGGTCTTTTATGGCATCTGGATTAAAAACAG
AGAAAAAACCAAATAGGTGAGATGAATTGAAAAGTGTAGCTTCATCTAAT
AAAATTAAATTTTGATCTGCCGCTCCACCACGAACATTAAAACCACTTGC
GAAGTCTAAAACCAATCAGGCAATCCAGCGAACTTTGTATCATATTTGGT
GTGTCGAGAATTTGATCATTTAAGGAAGTTCCGTCATATTTAGCCGCAGC
ATCAAAAACCAGGCGTACCTGAGTCGTGGCTCTGGTCCTGTCGACCACAG
GAAAAAATGGAAGGTAGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
GCATTGTCGGTTTCATAGGAATTATCTCTTGAGATTACTATTGGTTTATC
CTTCACCTCGGTTTCGCTACTCAAAGAAGAGGTTGAAGAGGATCTGACAG
CAGCAAAGTTCTTCTTTCTATCTCCCTGAGGTTTTCGACGAGGCGATTGC
TCCAAATGTAGTAATGTGTGGTGACCTATTTTTCTGCACTTTTGACAAGC
CGAGGAGCCTTTGCAATATTTGACTGTGTGAGTCGATTTGAGACACCTGA
TGCAGAATCTATGTTCTTTTGTGTTCTTTGGTGCGTGCAACATTACGGGC
ATCAAGGATGACGAGGCCGCCTTTGTGGCCGCCTGCGCGCCCTGCGCCTG
CCTCAGGGCCAGCTTGCCGAAGGAGCACTACGTCTTGTCGATCGCCCAGG
CGCCTATGGAAGCGGTGGGGCTCGATCTGATGGACGTCAACGGTGGCCAC
TTCCTCGCGATGGTTATCGCTACTCGGGATTTCTCTGGATCCGCCGCCTT
CGGTCCCTCTCAGCCGCCGCCGTCATCACAGTGCTCAAGGACTGGTTCGT
CGAGCTTGGGGGCCCGCGCGCGATCCGGACGGACGGCGGGCCGCAGTTCC
GCACTGAGTTCGCGGCCTTCTGCCGCTCCTTCGACATTGTCCTTGAGATC
TCGAGCCCGTATAATTCGGAGTCGAATGGGTTGGGGGAAGCGGCGGTCAA
GTCCGCGAAGCACTTGCTGAGGAAGACGACGCCCGTCTCATTCCCGGAGG
CCCTGCAGGAGTGGCGCAACACGCCTCGTGTTGACGGTCTCTCGCCCTCG
CGGTTGTTCTTCGGTCGCCGGATGCGGGGTCGGATCCTGCATCTCCCGCA
TCTCGTTCCAGAACGACCATGTTCTCGGAAGCGGCCCCGCCTTGCCGACT
CTGCTGGTGGCCGCGTTCTCCCGCCCCTCGTCGTTGGGGATCAGGTGCGC
GTCCAGGATCCCGCTTCCAATGAATGGGTCCGGACCGGAGTCATTACGGA
GGTCGTTGCTCATCGCCGCTATCGTCTCACCGCTGATTCAGGCGCGTCCT
TTGTGCGCAATCGCCGGTTTCTGCGGAAGTTGGTGGCGGGCGATGTGGTG
GGTCCACACGCGCCAACTCCCGTCCCTGCCCCGACATCTGCTCCGGCTCC
CGCTCCTCCTCGCCGGTCTCAACGTCAAGCC

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