Tk00137, Tk00137 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk00137
Unique NameTk00137
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length424
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 71..91
NoneNo IPR availableGENE3D1.20.960.30coord: 14..99
e-value: 5.2E-31
score: 108.4
NoneNo IPR availablePANTHERPTHR44129:SF2LISSENCEPHALY-1 HOMOLOG Bcoord: 16..424
NoneNo IPR availablePANTHERPTHR44129FAMILY NOT NAMEDcoord: 16..424
NoneNo IPR availableCDDcd00200WD40coord: 116..422
e-value: 5.24508E-105
score: 310.421
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 367..381
score: 40.45
coord: 136..150
score: 37.85
coord: 325..339
score: 46.12
IPR006594LIS1 homology motifSMARTSM00667Lishcoord: 22..54
e-value: 1.2E-5
score: 34.8
IPR006594LIS1 homology motifPFAMPF08513LisHcoord: 24..50
e-value: 1.1E-4
score: 21.9
IPR006594LIS1 homology motifPROSITEPS50896LISHcoord: 22..54
score: 10.394
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 194..233
e-value: 8.7E-11
score: 51.8
coord: 383..422
e-value: 9.9E-9
score: 45.0
coord: 341..380
e-value: 3.1E-12
score: 56.7
coord: 110..149
e-value: 3.5E-8
score: 43.2
coord: 152..191
e-value: 7.0E-11
score: 52.1
coord: 277..338
e-value: 2.0E-7
score: 40.7
coord: 236..274
e-value: 1.4E-7
score: 41.2
IPR001680WD40 repeatPFAMPF00400WD40coord: 238..273
e-value: 7.5E-4
score: 20.2
coord: 156..191
e-value: 4.4E-8
score: 33.5
coord: 385..421
e-value: 7.7E-8
score: 32.8
coord: 115..149
e-value: 1.6E-5
score: 25.5
coord: 196..232
e-value: 1.8E-8
score: 34.8
coord: 342..380
e-value: 2.4E-10
score: 40.7
coord: 279..338
e-value: 5.6E-6
score: 26.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 159..200
score: 16.39
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 348..389
score: 15.822
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 117..158
score: 16.19
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 322..347
score: 11.377
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 390..424
score: 14.184
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 243..283
score: 10.575
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 201..242
score: 15.722
IPR017252Dynein regulator LIS1PIRSFPIRSF037647LisHcoord: 14..423
e-value: 1.1E-167
score: 556.0
IPR017252Dynein regulator LIS1HAMAPMF_03141lis1coord: 16..422
score: 39.739
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 114..424
e-value: 7.2E-133
score: 444.1
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 409..423
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 178..192
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 367..381
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 220..234
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 325..339
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 136..150
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 117..424
score: 73.135
IPR037190LIS1, N-terminalSUPERFAMILY109925Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domaincoord: 17..89
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 107..421

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold188_size271682-snap-gene-1.28-mRNA-1maker-scaffold188_size271682-snap-gene-1.28-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk00137 ID=Tk00137|Name=Tk00137|organism=Tigriopus kingsejongensis|type=polypeptide|length=424bp
LPSGWAQWTWGSAMKMVLSQRQREELNKAIAEYMQSNGYTDALENFKRET
DMPGDIDKKFAGLLEKKWTSVIRLQKKVNELEAKLAEAEKEFISGAPTRE
KRTPGEWIPRPPEKYTLSGHRAPVTKVLFHPIFSLVISASEDSTVKVWDF
ETGDFERTLKGHTDSVQDIAFDGQGKLLVSCSADMSIKIWDFQSYDCIKT
LQGHDHNVSSVCFVPSGDHIISCSRDKSIKMWEVATGYCVKTYKGHREWV
RMVRVYGDQYIATCSNDQTVRVWALQTKDCKLELREHDHVVECVAWAPES
ATPAINEAASEDNKADGGKFMGPFLASGSRDKTIKIWDVTSGSCLFTLVG
HDNWIRGLVFHPGGKYLLSASDDKTLRIWDLAHKRCQKRLDAHTHFCTSL
DFHRSGPFVVTGSVDQTVKIWECR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR006594LisH
IPR001680WD40_repeat
IPR017252Dynein_regulator_LIS1
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR037190LIS1_N
IPR036322WD40_repeat_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
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