Tk00924, Tk00924 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk00924
Unique NameTk00924
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length520
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 231..255
e-value: 0.81
score: 18.7
coord: 291..313
e-value: 0.011
score: 24.9
coord: 261..285
e-value: 0.0013
score: 28.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 233..255
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 263..285
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 293..313
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 231..260
score: 14.066
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 261..290
score: 14.295
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 291..318
score: 12.487
NoneNo IPR availableGENE3D3.30.160.60coord: 259..286
e-value: 8.6E-13
score: 49.9
NoneNo IPR availableGENE3D3.30.160.60coord: 287..315
e-value: 2.0E-9
score: 39.2
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 261..285
e-value: 7.4E-5
score: 22.9
coord: 291..313
e-value: 0.0091
score: 16.3
coord: 231..255
e-value: 0.01
score: 16.2
NoneNo IPR availableGENE3D3.30.160.60coord: 216..258
e-value: 1.2E-8
score: 36.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 423..471
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 423..457
NoneNo IPR availablePANTHERPTHR23235TRANSCRIPTION FACTOR SP3coord: 85..358
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 246..289
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 277..316

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold186_size273091-processed-gene-1.24-mRNA-1snap_masked-scaffold186_size273091-processed-gene-1.24-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk00924 ID=Tk00924|Name=Tk00924|organism=Tigriopus kingsejongensis|type=polypeptide|length=520bp
MAFNQDEVDHLRGNSEGHCPLVAMATMKDRFCATSAEGNNSAGNPPIFGH
HVPGLPYFANTTEVTIKHKISIPSQSHGLERGGLLTPSPSSSESNYCSNS
AQGNHHRHLAHHGLYPNFAAHYNHSHLGYPGVGHAYGMAAQPTYTNPHHP
LNSYPSMMIPTTSGPAGHYPQEAVTQNIPNFPHAPPVGENLNPLPSHEAD
MKDPFYFHRAKCACVGCRMRKEKKRNEKKIHYCAYNDCDKKYSKSSHLKA
HYRLHMGERPFICVHVGCNKTFTRSDELTRHARTHSGEKRYHCDVCGKGF
IRSDHRRKHVKIHLRDKSVKKPVKRRNGRKAKKEDVSENVVSSTQDVLDS
DSPPGHGRGDLPPTSSALGPLSLVPVPGSTSLEEKENFISGINANSVVNV
HTSAPCYSPPSVPFQNVAMNNGQRESHYEAQGSSPSSTTPWMGGSREVST
SAFHHPSQLPHSAMGPTHGSDMNASLTYNQPMMNAFEMHNHIYNGCDTTT
TLQYKHYHQHPSHPPIAMYQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
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