Tk01373, Tk01373 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk01373
Unique NameTk01373
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length557
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001628Zinc finger, nuclear hormone receptor-typePRINTSPR00047STROIDFINGERcoord: 176..192
score: 54.34
coord: 225..233
score: 60.25
coord: 192..207
score: 63.24
coord: 233..241
score: 59.92
IPR001628Zinc finger, nuclear hormone receptor-typeSMARTSM00399c4goldcoord: 173..244
e-value: 2.7E-38
score: 143.2
IPR001628Zinc finger, nuclear hormone receptor-typePFAMPF00105zf-C4coord: 175..242
e-value: 1.7E-29
score: 102.0
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS00031NUCLEAR_REC_DBD_1coord: 176..202
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS51030NUCLEAR_REC_DBD_2coord: 173..248
score: 19.677
IPR003069Ecdysteroid receptorPRINTSPR01283ECDYSTEROIDRcoord: 242..251
score: 77.86
coord: 319..344
score: 47.25
coord: 538..556
score: 63.53
coord: 447..465
score: 52.63
coord: 519..536
score: 65.48
coord: 164..175
score: 83.33
IPR001723Nuclear hormone receptorPRINTSPR00398STRDHORMONERcoord: 460..475
score: 34.61
coord: 237..247
score: 41.01
coord: 395..411
score: 46.07
coord: 374..395
score: 34.44
coord: 517..534
score: 36.67
IPR000536Nuclear hormone receptor, ligand-binding domainSMARTSM00430holicoord: 373..529
e-value: 6.4E-39
score: 145.3
IPR000536Nuclear hormone receptor, ligand-binding domainPFAMPF00104Hormone_recepcoord: 366..538
e-value: 9.6E-28
score: 97.0
IPR000536Nuclear hormone receptor, ligand-binding domainPROSITEPS51843NR_LBDcoord: 319..557
score: 48.716
NoneNo IPR availableGENE3D1.10.565.10coord: 310..557
e-value: 2.2E-83
score: 281.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..147
NoneNo IPR availablePANTHERPTHR24082:SF331NR1H3 PROTEINcoord: 144..549
NoneNo IPR availablePANTHERPTHR24082NUCLEAR HORMONE RECEPTORcoord: 144..549
NoneNo IPR availableCDDcd07161NR_DBD_EcRcoord: 173..263
e-value: 1.60378E-51
score: 169.287
NoneNo IPR availableCDDcd06938NR_LBD_EcRcoord: 320..556
e-value: 1.7355E-128
score: 372.925
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 174..259
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 168..250
e-value: 9.4E-32
score: 111.0
IPR035500Nuclear hormone receptor-like domain superfamilySUPERFAMILY48508Nuclear receptor ligand-binding domaincoord: 319..556

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold1253_size52701-processed-gene-0.0-mRNA-1snap_masked-scaffold1253_size52701-processed-gene-0.0-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk01373 ID=Tk01373|Name=Tk01373|organism=Tigriopus kingsejongensis|type=polypeptide|length=557bp
MSSSAPQVTLLQARSQVKTYTTMTGGPPFNGGISTIMVNSPPGPGLSPPS
PPNFFGLQPSPPSSVLSPPMPNQPIYVDTSSPSSHFQASSPQITEIKTEP
PSSFSPPVNGYGHAPQRHNSSNSSVSSPSSQPGGFFVKSESNPPLTPNQA
VQEYARLQENERKKKGPVPRPQEELCTVCGDRASGYHYNALACEGCKGFF
RRSITKNSSYSCKYGDGCEIDMYMRRKCQACRLKKCYTVGMRAECVVPES
QCQKKRAIKQAQKAAQNGDASSTTLMANNSSLSGGMGGRGTPLAIGGPGL
SSNHNSIPSALAPRHLKPEEEELINRIVYYQDEFENPTAEDLNRVYHVPL
HPVNNDATGNESESDRLFQHMTEMTILTVQLIVEFTKHLPGFPTLCREDQ
VSLLKGCSSEVMMLRGARRYDPQRDSIIYATNYPFSKDNYVKAGLGNDAL
FRFCRNMCKMKVDNAEYALITAIVIFSERHNVKEPKRVEKIQEIYVEALQ
SYVMAKQKKEPMVAFAKLLSVLTELRSLGNNNAKTCFNLRMINRKLPAFL
AEIWDIK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001628Znf_hrmn_rcpt
IPR003069Ecdystd_rcpt
IPR001723Nuclear_hrmn_rcpt
IPR000536Nucl_hrmn_rcpt_lig-bd
IPR013088Znf_NHR/GATA
IPR035500NHR_like_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003700DNA-binding transcription factor activity
GO:0043565sequence-specific DNA binding
GO:0004884ecdysteroid hormone receptor activity
GO:0003677DNA binding
GO:0035100ecdysone binding
GO:0003707steroid hormone receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0035076ecdysone receptor-mediated signaling pathway
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
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