Tk02258, Tk02258 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk02258
Unique NameTk02258
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length1479
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1143..1197
NoneNo IPR availableCOILSCoilCoilcoord: 640..695
NoneNo IPR availableCOILSCoilCoilcoord: 725..756
NoneNo IPR availableCOILSCoilCoilcoord: 358..418
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1139..1160
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1161..1228
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1138..1315
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1229..1243
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1283..1301
NoneNo IPR availablePANTHERPTHR22880FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINScoord: 18..746
NoneNo IPR availablePANTHERPTHR22880:SF173BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN PROTEIN 1Acoord: 756..1150
coord: 18..746
coord: 1362..1458
NoneNo IPR availablePANTHERPTHR22880FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINScoord: 756..1150
coord: 1362..1458
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 1370..1383
score: 29.04
coord: 1384..1400
score: 58.31
coord: 1400..1418
score: 24.03
coord: 1418..1437
score: 39.13
IPR001487BromodomainSMARTSM00297bromo_6coord: 1348..1456
e-value: 8.9E-32
score: 121.6
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 1360..1439
e-value: 8.1E-20
score: 70.6
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 1367..1437
score: 19.647
IPR018501DDT domainSMARTSM00571testlast3coord: 435..501
e-value: 1.4E-5
score: 34.6
IPR018501DDT domainPFAMPF02791DDTcoord: 438..497
e-value: 2.6E-5
score: 24.3
IPR018501DDT domainPROSITEPS50827DDTcoord: 435..501
score: 11.676
IPR013136WSTF/Acf1/Cbp146PFAMPF10537WAC_Acf1_DNA_bdcoord: 40..139
e-value: 7.8E-30
score: 103.3
IPR013136WSTF/Acf1/Cbp146PROSITEPS51136WACcoord: 39..145
score: 40.154
IPR028941WHIM2 domainPFAMPF15613WSDcoord: 772..969
e-value: 5.3E-21
score: 74.9
IPR028942WHIM1 domainPFAMPF15612WHIM1coord: 607..648
e-value: 9.9E-4
score: 18.5
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 1315..1457
e-value: 1.5E-34
score: 120.8
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 1357..1460
IPR018359Bromodomain, conserved sitePROSITEPS00633BROMODOMAIN_1coord: 1372..1429

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold633_size121756-snap-gene-0.21-mRNA-1maker-scaffold633_size121756-snap-gene-0.21-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk02258 ID=Tk02258|Name=Tk02258|organism=Tigriopus kingsejongensis|type=polypeptide|length=1479bp
LALFSACPNWLTKPSFKMPLLRKSPFQRAKPARDLRPDEEVFFCEATKEI
FRDYDEFFQRTILCNSLVWSCSITGKANLTYEEAVESERKAKKRLGTLPK
PLKRGLLWLAHRTSRGRLSEVVDDVYVFACGRYFIGEVVEAIVKEQWCDC
KIIRILPPTEEEIQKDHEEEEAERKKDIEAGKEPVPKPRKSFSPPEYLFK
YELEELEPDDPEITTLFVVEADDMRREKGFYTREKNLLFLKNVVQLGKSG
NFQLKKEVIEKYHVDDLKFIDVFNGPEPQFEESKRLKGLGSLHHTAKNKK
DPKHDKSKAHHGSGRKSKMGKNQGTLDSWVKGEKTSLSAPSSTHKVKKQS
PAELEAEMKRMKEQNARFKLEMKKRAEEARKRKVEDKAKEKERKKEEQKL
LKELMNEWKKRRDDLECDDLKELPKPTPIHCKIPNPLFGDFLTLLEFIHC
FSGVLETNDSFPNGVTFDILEHALTDDQNLGGPLFDMLSFLLGALFDLQD
EEDNEVKLDKITVNPDQIDKNILGKDEDVANHIKLATGAAKWPFKTQGGQ
KLRDLHLDQYTITEILRLHLKSGGAFRSEKLIMWLYQQRGGYRLSDDPVL
TFKMEEPQVIEALTKRTIFELSCQDKLKIMTVLMLQILTFATVRDEIDEK
LNEYHEAKSELREHRIVENRRQRILDESEKQRKKEEREKKKETDLKAHET
PSTQNGVDAKKIGDPVSENIPLTERQRLALQTQKEKEEKDRQRKEEIKRS
EAWEKEEELKGQVFEVEFKAGMNMLGRDRVYRRYWMLGCLPGVFVEHDDD
TVGPCMDKPTPFSENAGPMNEETAIKKAQEIMDAREKTDEKGSSDKENDQ
DQSRKSYSKKQPSAPLKQKVLSAKNGSTEAASTSTPMEIVGEADLPVDVK
PELKSLVKPSENLPWGACLSNDESCPVHSPILPKTHWSYFKSPEEIDSLI
DSLNDRGIREFDLKEKLIRERERISKSLKKFNMTSKFCQSDAETNKKKIL
QPAADDKPVSIMAVVDLTLRDQILELEEKIFFGTLGTLKVRDRSLWQKAI
QDGTFDKQCENLGWGGRSSRDTPVESRLQSNAVSRDSTRPGTPNGVQGDT
ENRRESGGSYADKEMSRKVTGLAGAILQVGQMVDPKYIKTPLGEDEKERR
KRLKEEDKRAKEEEEEEDDQEEEKHEEEEEMVEETEVEEELEEEEAEPAA
DDEDEEEAAESDEDLPDGEEEDLQDEDDEDDRPVKKRRGNEEATSPIQVK
PKKAKKNPKTPSISQLLGKRRSAAEASEKITRVTQAEIHSGNSSGSEDSL
ARGGATRSKRLATKRTMEATLLEQQAIEAMNNQAASSARSKRRRAVDDTV
ESMFNPTVLEDLLNAMMKHKDGWPFDRPITKAEAPDYHKIIKKPIDLGTI
RSSINRMKYSCNQEVVDDIRLVFQNCWTYNRDEAEEYQCGLRLEKYFNKE
AKKLGLLYDSDDVDDEPLKPARKKSRRTF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR004022DDT_dom
IPR013136WSTF_Acf1_Cbp146
IPR028941WHIM2_dom
IPR028942WHIM1_dom
IPR036427Bromodomain-like_sf
IPR018359Bromodomain_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
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