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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR007866 | TRIC channel | PFAM | PF05197 | TRIC | coord: 53..228
e-value: 1.3E-41
score: 142.2 |
| IPR007866 | TRIC channel | PANTHER | PTHR12454 | TRIMERIC INTRACELLULAR CATION CHANNEL | coord: 26..248 |
| None | No IPR available | PANTHER | PTHR12454:SF11 | SUBFAMILY NOT NAMED | coord: 26..248 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 114..150 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 46..56 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 173..212 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 90..113 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 79..89 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 27..45 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 151..172 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 213..235 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 1..26 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 57..78 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 236..257 |
| None | No IPR available | TMHMM | TMhelix | | coord: 213..235 |
| None | No IPR available | TMHMM | TMhelix | | coord: 91..113 |
| None | No IPR available | TMHMM | TMhelix | | coord: 151..173 |
| None | No IPR available | TMHMM | TMhelix | | coord: 57..79 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk02944 ID=Tk02944|Name=Tk02944|organism=Tigriopus kingsejongensis|type=polypeptide|length=257bp
LHFKMESLNLAAFGLDSTNLQGLPKRLYPWFDLCHVLLCVVSIRKEAGRN
HGHKHPFATWTACILASFAGSLLANPLLGKPILDAFKDEFLLLSATVIYA
LVFFCPGDVFFSLVTSKPVYTGLCAVKEVYRAKKIYAGIVEGSKFYPDSK
WFVPFLIAVLKGNGSAFMAPIYRKLLALSKPGSPSELFKPSVTTKECMLG
ALLMLQFGYSNDVIYLALVGLFMSVKISGIIGQAVDPFSPIDSVWNSFVE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR007866 | TRIC_channel |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0015672 | monovalent inorganic cation transport |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005261 | cation channel activity |
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