Tk03176, Tk03176 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk03176
Unique NameTk03176
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length832
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002867IBR domainSMARTSM00647ibrneu5coord: 461..522
e-value: 8.3E-21
score: 85.1
coord: 530..594
e-value: 1.2E-9
score: 48.0
IPR002867IBR domainPFAMPF01485IBRcoord: 462..522
e-value: 4.2E-13
score: 49.2
coord: 541..587
e-value: 1.3E-6
score: 28.5
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 386..475
e-value: 1.0E-13
score: 53.1
NoneNo IPR availableGENE3D1.20.120.1750coord: 518..756
e-value: 8.3E-104
score: 348.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 361..381
NoneNo IPR availablePANTHERPTHR11685:SF204ARI UBIQUITIN LIGASE ARIADNE HOMOLOGcoord: 244..761
NoneNo IPR availablePANTHERPTHR11685:SF204ARI UBIQUITIN LIGASE ARIADNE HOMOLOGcoord: 14..168
NoneNo IPR availableCDDcd16626RING-HC_RBR_HHARIcoord: 391..447
e-value: 2.95594E-23
score: 91.2795
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 388..470
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 462..529
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 541..599
IPR031127E3 ubiquitin ligase RBR familyPANTHERPTHR11685RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAININGcoord: 14..168
coord: 244..761
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 392..438
score: 10.114

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold91_size383040-snap-gene-1.21-mRNA-1maker-scaffold91_size383040-snap-gene-1.21-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk03176 ID=Tk03176|Name=Tk03176|organism=Tigriopus kingsejongensis|type=polypeptide|length=832bp
MSSGDEDYLYDDSEDSGNESTVNQEEDDDNDDFGMDIGLGEEPGGSGVGP
AAEKKSGLEHDYPFEVLSTEQIVEHMVNCIKEVNTVIQIPTTTVRILLNH
FKWDKEKLMEKYYSDSQSQMFQEAKVVPPFKSGPAPTGESAGSVAGKGLK
GGAAKTPSTLECEICYLTLPKSLASRRTTQIKAEEDDRPRPLGLAALSDP
TRLTPLKARSRTKTLESFGPRREDCGSSSSMSSGDEDYLYDDSEDSGNES
TVNQEEDDDNDDFGMDIGLGEEPGGSGVGPAAEKKSGLEHDYPFEVLSTE
QIVEHMVNCIKEVNTVIQIPTTTVRILLNHFKWDKEKLMEKYYSDSQSQM
FQEAKVVPPFKSGPAPTGESAGSVAGKGLKGGAAKTPSTLECEICYLTLP
KSLTTALECGHPYCNTCWTEYLTTKIMDEGASQSIECPGSCDILVDDVTV
MKLVKDAKVKLKYQHLITNSFVECNRLMRWCPAPDCPNAVKVQFVECKPV
KCRCSHLFCFACSENWHDPVRCELIKRWIKKCDDDSETSNWISANTKECP
KCKATIEKDGGCNHMICRNQSCRADFCWVCLGPWEPHGSSWYNCNRYDED
EAKNARDSQEKSRSALQRYLFYCNRYMNHLQSLKFEHKLYTMVKDKMDEM
QQHNMSWIEVQFLKKAVDILCECRRTLMYTYVFAYYLKRNNQSELFEANQ
KDLENSTETLSEYLERDISVENLVDIKQKVQDKFRYCDSRRKVLLDHVHE
GYDREWWLYTECRPIGWGRLARASDDLVIIGKQVGGGGAALRMTNTLQAS
TANGMDSLAANAVGQIGQLLIVEKHARGFTAD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002867IBR_dom
IPR013083Znf_RING/FYVE/PHD
IPR031127E3_UB_ligase_RBR
IPR001841Znf_RING
Vocabulary: Biological Process
TermDefinition
GO:0016567protein ubiquitination
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
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