Tk03346, Tk03346 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk03346
Unique NameTk03346
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length230
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001781Zinc finger, LIM-typeSMARTSM00132lim_4coord: 174..226
e-value: 3.3E-17
score: 73.1
coord: 54..106
e-value: 9.8E-17
score: 71.6
coord: 114..166
e-value: 1.2E-15
score: 67.9
IPR001781Zinc finger, LIM-typePFAMPF00412LIMcoord: 175..226
e-value: 1.8E-12
score: 47.2
coord: 55..111
e-value: 3.6E-17
score: 62.2
coord: 115..169
e-value: 5.4E-14
score: 52.1
IPR001781Zinc finger, LIM-typePROSITEPS00478LIM_DOMAIN_1coord: 172..208
IPR001781Zinc finger, LIM-typePROSITEPS00478LIM_DOMAIN_1coord: 115..148
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 53..113
score: 13.731
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 173..230
score: 12.791
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 114..172
score: 8.87
NoneNo IPR availableGENE3D2.10.110.10coord: 110..169
e-value: 1.6E-18
score: 68.3
NoneNo IPR availableGENE3D2.10.110.10coord: 38..109
e-value: 2.4E-18
score: 67.8
NoneNo IPR availableGENE3D2.10.110.10coord: 170..230
e-value: 4.7E-17
score: 63.6
NoneNo IPR availablePANTHERPTHR24216FAMILY NOT NAMEDcoord: 32..224
NoneNo IPR availableCDDcd08368LIMcoord: 55..107
e-value: 3.83442E-11
score: 54.6311
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 53..85
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 82..145
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 141..204

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold1479_size39259-snap-gene-0.9-mRNA-1maker-scaffold1479_size39259-snap-gene-0.9-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk03346 ID=Tk03346|Name=Tk03346|organism=Tigriopus kingsejongensis|type=polypeptide|length=230bp
LSHLRLRQPTSEVMATSVTSSSYQYTSKTSSSSFGNNNNNSSNPSPGNLE
ENMFCAKCNEPIKSGKALKAGNKVWHDHHFACSICGLPLKDEKVYQKDGS
LYCDNDYKKRFVPRCAFCSGYISQDCVKALDQSWHPTCFLCRKCNKPFGK
DEGFHEMNGHPYCKTCYIDTACEKCAGCSKPITDRAMKALDQTWHVTCFV
CKDCGKSFEGQQSFYCVDGRPCCGNCADAS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001781Znf_LIM
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