Tk04083, Tk04083 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk04083
Unique NameTk04083
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length650
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 473..495
e-value: 38.0
score: 8.1
coord: 498..520
e-value: 0.21
score: 20.6
coord: 413..440
e-value: 39.0
score: 8.0
coord: 550..573
e-value: 0.011
score: 25.0
coord: 579..602
e-value: 0.014
score: 24.6
coord: 523..546
e-value: 1.8
score: 17.6
coord: 608..632
e-value: 2.2
score: 17.3
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 610..632
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 552..573
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 525..546
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 581..602
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 550..578
score: 10.367
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 608..637
score: 9.369
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 579..607
score: 12.528
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 523..551
score: 10.367
NoneNo IPR availableGENE3D3.30.710.10coord: 16..98
e-value: 4.7E-9
score: 38.4
NoneNo IPR availableGENE3D3.30.160.60coord: 483..548
e-value: 3.2E-6
score: 29.0
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 551..573
e-value: 0.015
score: 15.7
NoneNo IPR availableGENE3D3.30.160.60coord: 549..632
e-value: 1.1E-12
score: 49.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..139
NoneNo IPR availablePANTHERPTHR24409FAMILY NOT NAMEDcoord: 406..634
NoneNo IPR availablePANTHERPTHR24409:SF295IP01295P-RELATEDcoord: 406..634
IPR000210BTB/POZ domainPFAMPF00651BTBcoord: 22..92
e-value: 3.4E-8
score: 33.6
IPR000210BTB/POZ domainPROSITEPS50097BTBcoord: 30..96
score: 12.309
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 551..598
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 507..559
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 18..92

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold1193_size56161-processed-gene-0.0-mRNA-1snap_masked-scaffold1193_size56161-processed-gene-0.0-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk04083 ID=Tk04083|Name=Tk04083|organism=Tigriopus kingsejongensis|type=polypeptide|length=650bp
MPPAGLTRLRCSSPARRDIRAQLLSREAWCDADLVCPGQTFPTHRLVLGA
LSDWCRRLMAELPGQTRLVLHLPDFQPTEVEALLSLVYGTDLSHLRLGPP
TPLMTCLGIRLAGGVQAPAQAPAEWDEAGDGSSEADDGVPEAMEAPLVKV
ESVEAGAGPEEPWGSRLAEPGLEALAVAEGPPLTVANYRTLRRQMGARWA
GRALVGLRRDARGAGWCGRLLARSQPEPGAMRAQFAASAAAMRAVGGLSR
GDVGFQTAFFTRQGWPVPAAHGELRDTLQAQMEKLPIDQLQKITSSDKIR
RVRLRSEPRPGADLPPVAAIRLTLDLAPSELEQVVLLACPSHASPTLVCH
PIRAESDRMADSARLWVDVLLDVWCPAPASLQGAEFLLEQFESVAEPMSV
FQAAQGVLNGREVTCPECGRVFSLLTVKKRVVYQEHKDMHRLEGFACDCP
GVPANVRDKANHVKLCHSQGRYQQCGECDFIGSTGELSQHQARLHQSYIC
DVCGQVSENLKKHQVHIQNHKVSQCDECGKECLGPSTLSRHKSNVHGQEI
PCEDCGKSFKGRLRWRRHLKRTHEDDARFICDLCGQAFGRKMTMKRHKIS
VHIKNRPFVCRYGCGADYNDECNLRTHEKRRHGGTFKDGQSFMHVYKNIA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR000210BTB/POZ_dom
IPR036236Znf_C2H2_sf
IPR011333SKP1/BTB/POZ_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005515protein binding
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