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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR009071 | High mobility group box domain | SMART | SM00398 | hmgende2 | coord: 58..128
e-value: 2.0E-24
score: 97.1 |
| IPR009071 | High mobility group box domain | PFAM | PF00505 | HMG_box | coord: 59..127
e-value: 1.5E-20
score: 73.3 |
| IPR009071 | High mobility group box domain | PROSITE | PS50118 | HMG_BOX_2 | coord: 59..127
score: 20.773 |
| IPR036910 | High mobility group box domain superfamily | GENE3D | 1.10.30.10 | | coord: 55..136
e-value: 1.6E-25
score: 91.4 |
| IPR036910 | High mobility group box domain superfamily | SUPERFAMILY | 47095 | HMG-box | coord: 44..130 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 326..346 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 309..394 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 363..388 |
| None | No IPR available | PANTHER | PTHR10270 | SOX TRANSCRIPTION FACTOR | coord: 32..137 |
| None | No IPR available | PANTHER | PTHR10270:SF288 | SUBFAMILY NOT NAMED | coord: 32..137 |
| None | No IPR available | CDD | cd01388 | SOX-TCF_HMG-box | coord: 58..125
e-value: 3.53769E-29
score: 106.614 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk04222 ID=Tk04222|Name=Tk04222|organism=Tigriopus kingsejongensis|type=polypeptide|length=426bp
MTSALIGQVVMANGFSLMTVEHSVPQSGSEVFRSMKVGNNSKTPYSDATQ
TKKHKLNHIKRPMNPFMVWSQLERRKIIEVTPDKHNAEISKELGRRWKLL
SQEARLPYLQEAERLRILHQKEFPDYKYKPKKKPKSGGGEGCAHGSLPSG
LASRSVSDKSKAIVKSKLVSAPHPGCGKIHTHNTRMKNSAFSAQSASELK
RLKLKIAEADEGHPLIGGRHFVPRAETTKENMRLDGFYPRPLPQPVPGTT
NISIPVTVLEFADQNARSHCIRSAIPLPQLPLSPTQSQQSLPEFLAAPQK
LPIHIAPKPPSPATVPVLPPSPSSSLDDIDLDTNEPTSTVSAPMASILPD
SSAVERAVARVSQPPQHHNNGASGADQMDTSTSSPAGGVAMDSGPVSPFS
CTDFLNLGQTTTTTKTDSGNDYMIKM back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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