Tk04485, Tk04485 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk04485
Unique NameTk04485
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length215
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007829TM2 domainPFAMPF05154TM2coord: 130..172
e-value: 1.0E-11
score: 44.9
NoneNo IPR availablePANTHERPTHR21016BETA-AMYLOID BINDING PROTEIN-RELATEDcoord: 59..206
NoneNo IPR availablePANTHERPTHR21016:SF1TM2 DOMAIN-CONTAINING PROTEIN 1coord: 59..206
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 147..170
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 171..215
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..146
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.836
NoneNo IPR availableTMHMMTMhelixcoord: 147..169

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold168_size293125-processed-gene-1.40-mRNA-1snap_masked-scaffold168_size293125-processed-gene-1.40-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk04485 ID=Tk04485|Name=Tk04485|organism=Tigriopus kingsejongensis|type=polypeptide|length=215bp
MDNLAYWLTLALLAALVRGSEDPELAFGDEDGELIQAPAARPPMELIRES
EIPVSRIYRDCPDDLLPGQFVCTQVPIDPDTQQPRHCDQLSQTAAAPCET
VPGIICRETGNQTFYRRIPCQWTNGYDFDTTLLLSVFLGMFGADRFYLGY
PAIGLLKFSTLGFFFLGHLLDIMLIASQMVGPADGSYYVISYFGPKVNVV
GLDEDTLRKPQSDWY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007829TM2
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