Tk06132, Tk06132 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk06132
Unique NameTk06132
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length144
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000164Histone H3/CENP-APRINTSPR00622HISTONEH3coord: 88..106
score: 82.49
coord: 122..143
score: 94.86
coord: 66..83
score: 97.46
coord: 106..122
score: 96.93
IPR000164Histone H3/CENP-ASMARTSM00428h35coord: 42..144
e-value: 2.3E-63
score: 226.5
IPR000164Histone H3/CENP-APANTHERPTHR11426HISTONE H3coord: 57..144
IPR000164Histone H3/CENP-APROSITEPS00959HISTONE_H3_2coord: 75..83
IPR009072Histone-foldGENE3D1.10.20.10coord: 19..144
e-value: 1.4E-53
score: 182.4
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 56..141
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 54..140
e-value: 4.1E-41
score: 140.3
NoneNo IPR availablePANTHERPTHR11426:SF44HISTONE H3.3Ccoord: 57..144

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold98_size375582-snap-gene-2.31-mRNA-1maker-scaffold98_size375582-snap-gene-2.31-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk06132 ID=Tk06132|Name=Tk06132|organism=Tigriopus kingsejongensis|type=polypeptide|length=144bp
MSHPNPTEDRVSVPGMFTRCVRRSTNQRSSFRPMSAGLVRTNPRASFQTL
DQWPEPLREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGA
LQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000164Histone_H3/CENP-A
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046982protein heterodimerization activity
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
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