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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR013087 | Zinc finger C2H2-type | SMART | SM00355 | c2h2final6 | coord: 422..444
e-value: 2.3
score: 17.2
coord: 450..473
e-value: 1.3
score: 18.0
coord: 340..363
e-value: 13.0
score: 12.2
coord: 293..316
e-value: 6.1
score: 15.2
coord: 264..284
e-value: 20.0
score: 10.6
coord: 368..391
e-value: 26.0
score: 9.7 |
| IPR013087 | Zinc finger C2H2-type | PROSITE | PS00028 | ZINC_FINGER_C2H2_1 | coord: 452..473 |
| IPR013087 | Zinc finger C2H2-type | PROSITE | PS50157 | ZINC_FINGER_C2H2_2 | coord: 264..292
score: 8.58 |
| None | No IPR available | GENE3D | 3.30.160.60 | | coord: 259..323
e-value: 3.5E-6
score: 29.0 |
| None | No IPR available | GENE3D | 3.30.160.60 | | coord: 401..478
e-value: 4.6E-7
score: 31.8 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 203..225 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 203..226 |
| None | No IPR available | PANTHER | PTHR24409 | FAMILY NOT NAMED | coord: 250..495 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk06261 ID=Tk06261|Name=Tk06261|organism=Tigriopus kingsejongensis|type=polypeptide|length=801bp
MALEGWLTEVQSISGLLGVSIEDWVVLLKNKFDVHAHNEPHIAQALFLEK
ASGRFLHKVFGKTIRDGRLDAPSGLPELAQDIFEHSRVCQGFDSDLKGEH
WNSLAPGFHPYPRQMDPGCSFVFKDPSNTATVCPSCTQTMHCEVDQVLVE
EVFEAVDHKPDIEPEEIIVTMEDLTKIDLNEVEASLWPSDDKLGKVTFSD
SDKVAKDDKQDEKPIIKDGTPGLKRKRRTIKSASKSDVVETCAPNEPIQK
ESLNVKSGDKLPLFPCNHCNKMFRGRGGYRKHRAFLRNRSRKIPCKVCAD
VHYSFDSLAKHMEVEHLQVPISLTQYLQPPEEIKTMRNGQRCSTCKVYCN
GLSVLTRHRALYHELGDFKCADCHQYHLTYYDLVLHNYNQHDKLAALLKP
STEDLDKVEHEDGRIELKITRYDCPKCDKSYNDDGIWGIHMKAHHSWSIF
TCQECDEKCHYVKDFVDHVKNFHSDNPEIKCPKCAEIISLDASLSTLLVG
TISKTMGMSIFNTVGIRRNSWDTKKNSVPDSMRNTLYTRDGFKAHFSQDQ
FYFNASRQVLCLRSDAVPTQFSHTKFKKARPLPRNRSMNESETEKLETAI
DHDHKYGMEPENNVKQSMQADLERVPQAYKDEPGSDPEDPLHIQGMDDFE
DVSEPITNEVNIAQKIEIPPSDMPSIPFVGHLVGGSDFDFEVQTMDQEKH
EALLEVRSLRKTVIKLGEDLRRFKTRYRRVCREKHAEVRRKAQTNSRPKT
TAWSIEMIRKGLQIRLACGESGYNTLIDLKYSLPSIRTLQRRTGSLTIMP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR013087 | Znf_C2H2_type |
Vocabulary: Molecular Function
| Term | Definition |
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| GO:0003676 | nucleic acid binding |
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