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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 90..110 |
| None | No IPR available | COILS | Coil | Coil | coord: 169..196 |
| None | No IPR available | GENE3D | 3.40.50.10470 | | coord: 393..590
e-value: 1.9E-69
score: 235.0 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 138..192 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..210 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 63..79 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 194..210 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 80..112 |
| None | No IPR available | PANTHER | PTHR10233:SF14 | TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT DELTA | coord: 145..593 |
| None | No IPR available | PANTHER | PTHR10233 | TRANSLATION INITIATION FACTOR EIF-2B | coord: 145..593 |
| None | No IPR available | SIGNALP_GRAM_POSITIVE | SignalP-TM | SignalP-TM | coord: 1..10
score: 0.465 |
| IPR000649 | Initiation factor 2B-related | PFAM | PF01008 | IF-2B | coord: 290..581
e-value: 1.8E-80
score: 270.1 |
| IPR037171 | NagB/RpiA transferase-like | SUPERFAMILY | 100950 | NagB/RpiA/CoA transferase-like | coord: 273..590 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk06818 ID=Tk06818|Name=Tk06818|organism=Tigriopus kingsejongensis|type=polypeptide|length=599bp
MPNKKRQRGPKSRASAAPKGPTVQEVLIEAPPTQKIVNVEEPPPAEGSKE
RIDLPHKSLQPPPKTITPLSQGDTEPSQEQTKSKMSDKPVEKTKEEILAE
REAKKAAKAAKKTGVKEVAPQRGVGTASSQMGPKPEKSREGILAEREAKK
AGKTVKKEPGPKSDSTVPTDKSKAELKAERRAKQEAQRAAKEETSSKPVI
QHQASITKQKLQRVPDDIQADRQSVEKKLQRKLASAKIPARTKAQRKVVL
FSHLHQYEKELSITREIPIVGGLIHPAVLELGLKYAEGIITGSNARCVAF
MNAMAKVIKDYSTPPQKDLPRDLDSRIKPYITFLRQCRTLSVSMGNAIRF
LKSKINGLDPAMPEDEAKEKLLEAIDNYVFENIVLAAKQISITACEKIRN
GDVIMIFGCSSLLRTVLIDAAAMPDLDFRVIVVDGRPKFEGREMVRHLVN
AAINCTYVQVSSVPYMMPEVTKVFLGAHAVLANGSVMSRVGTSQVALVAK
GFNVPVLVCCETYKFSERVQTDSFVFNELGDPDDLVSTGCASNTPLADWR
DFDSLTLLNLTYDVTPPSLVDAIISEVSVIPTTSVPVILRLKNIDHVVS back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000649 | IF-2B-related |
| IPR037171 | NagB/RpiA_transferase-like |
Vocabulary: Biological Process
| Term | Definition |
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| GO:0044237 | cellular metabolic process |
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