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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 508..528 |
None | No IPR available | GENE3D | 3.10.20.90 | | coord: 1..45 e-value: 1.2E-21 score: 78.9 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 97..187 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 97..119 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 120..187 |
None | No IPR available | PANTHER | PTHR16160:SF13 | FERMITIN 2-RELATED | coord: 1..657 |
None | No IPR available | CDD | cd13205 | FERM_C_fermitin | coord: 543..636 e-value: 1.63904E-53 score: 176.764 |
None | No IPR available | SUPERFAMILY | 50729 | PH domain-like | coord: 545..635 |
None | No IPR available | SUPERFAMILY | 50729 | PH domain-like | coord: 359..454 |
IPR001849 | Pleckstrin homology domain | SMART | SM00233 | PH_update | coord: 350..457 e-value: 2.9E-5 score: 33.5 |
IPR001849 | Pleckstrin homology domain | PFAM | PF00169 | PH | coord: 365..453 e-value: 1.3E-7 score: 32.0 |
IPR001849 | Pleckstrin homology domain | PROSITE | PS50003 | PH_DOMAIN | coord: 333..455 score: 8.035 |
IPR019749 | Band 4.1 domain | SMART | SM00295 | B41_5 | coord: 38..549 e-value: 1.9E-36 score: 137.1 |
IPR011993 | PH-like domain superfamily | GENE3D | 2.30.29.30 | | coord: 350..490 e-value: 1.3E-50 score: 172.8 |
IPR011993 | PH-like domain superfamily | GENE3D | 2.30.29.30 | | coord: 544..640 e-value: 1.1E-15 score: 59.8 |
IPR019748 | FERM central domain | PFAM | PF00373 | FERM_M | coord: 263..549 e-value: 5.5E-38 score: 129.9 |
IPR019748 | FERM central domain | CDD | cd14473 | FERM_B-lobe | coord: 273..324 e-value: 3.38411E-6 score: 43.7743 |
IPR014352 | FERM/acyl-CoA-binding protein superfamily | GENE3D | 1.20.80.10 | | coord: 261..328 e-value: 1.3E-6 score: 30.6 |
IPR037843 | Kindlin/fermitin | PANTHER | PTHR16160 | FAMILY NOT NAMED | coord: 1..657 |
IPR037837 | Kindlin/fermitin, PH domain | CDD | cd01237 | PH_fermitin | coord: 350..476 e-value: 4.82966E-70 score: 222.266 |
IPR035963 | FERM superfamily, second domain | SUPERFAMILY | 47031 | Second domain of FERM | coord: 489..544 coord: 269..315 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk07015 ID=Tk07015|Name=Tk07015|organism=Tigriopus kingsejongensis|type=polypeptide|length=717bp MDWSDHAIWWPEKNMWLDKTRWTLDQYNITADAIIYFTPMHKTLRVQLPD LRIIDCNVDFSVRTFNASINLCKDLGIRHPEELSLCKPLEQDDLKQNYQE TPKKKHPPPPTKDGKTGERIDTNTFISKNGRQYHSNGSLNGTLRSSNKNG AAPFYSNPGTLRNGNYSPYTNGHTPTTPPFQNASSQGALNSSVLSAIDGG DLSLAQSPPPSQDAKAVQLHPKTLVEKARMNVGWLDSSLSIMEQGVSEFD TLLLRFKYYSFYDLSPKYDAVRINQIYEQAKWQILNEEMDCTEEEMLLFA ALQLQVTLQSNVAQPHDLFEEDDDVDAALNDLEISLEGSLNNGHNMTKTP FLADTLRYFRPKRFTLKSFKRLHFVLRDLNLNAFRSSDMAHKGSEPTVSV NLKGCEVTPEINIAQQKYQIKLEVPSAEGMTEMWLRCDSEGQYAKWMAAC RLAAKGKSLADSSYDAEVKSIQAFLSMQHPANAPVINPETLDINVEEYVA PRFLRKLKSKLRQRILEAQANVKNLNLLEAKMNFIKAWQSLPGYGVSLFV VKFHGEKKEELLGVSCNKIMRMTLNNGDHIKTWRFSTMKAWNVNWETKHM MIQLDDERNENVIFNCLSADCKVVHEFIGGYIFLSMRSKDANQQLNEEMF HKLTGGWVIAETRDGHDIDAIGVIGAPFQGNLKICERGVDVVFVLIIIVG LSHIGLEADLQLWETHQ back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
Term | Definition |
GO:0007229 | integrin-mediated signaling pathway |
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