Tk08278, Tk08278 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk08278
Unique NameTk08278
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length326
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 100..169
e-value: 2.6E-9
score: 37.2
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 80..227
score: 10.43
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 90..223
e-value: 7.6E-16
score: 59.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 300..326
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 303..317
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 103..318
NoneNo IPR availablePANTHERPTHR24559:SF222SUBFAMILY NOT NAMEDcoord: 103..318
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 101..209

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold717_size107106-processed-gene-0.11-mRNA-1snap_masked-scaffold717_size107106-processed-gene-0.11-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk08278 ID=Tk08278|Name=Tk08278|organism=Tigriopus kingsejongensis|type=polypeptide|length=326bp
MGKERSPIVLLILESFHGRTGTSNWSRLSTAGGRLTGGGSQNLCSFVFFG
ACNITGIKDDEAAFVAACAPCACLRASLPKEHYVLSIAQAPMEAVGLDLM
DVNAAAVITVLKDWFVELGGPRAIRTDGGPQFRTEFAAFCRSFDIVLEIS
SPYNSESNGLGEAAVKSAKHLLRKTTPVSFPEALQEWRNTPRVDGLSPSR
LFFGRRMRGRILHLPHLVPERPCSRKRPRLADSAGGRVLPPLVVGDQVRV
QDPASNEWVRTGVITEVVAHRRYRLTADSGASFVRNRRFLRKLVAGDVVG
PHAPTPVPAPTSAPAPAPPRRSQRQA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
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