Tk08787, Tk08787 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk08787
Unique NameTk08787
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length528
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 356..376
NoneNo IPR availableGENE3D3.30.420.470coord: 48..134
e-value: 7.6E-9
score: 37.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 500..515
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 500..528
NoneNo IPR availablePANTHERPTHR24082:SF283NUCLEAR HORMONE RECEPTOR HR96coord: 282..482
NoneNo IPR availablePANTHERPTHR24082NUCLEAR HORMONE RECEPTORcoord: 282..482
NoneNo IPR availableCDDcd06966NR_DBD_CARcoord: 283..376
e-value: 6.79531E-64
score: 201.135
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 282..368
IPR001628Zinc finger, nuclear hormone receptor-typePRINTSPR00047STROIDFINGERcoord: 334..342
score: 56.6
coord: 342..350
score: 55.17
coord: 301..316
score: 54.16
coord: 285..301
score: 46.09
IPR001628Zinc finger, nuclear hormone receptor-typeSMARTSM00399c4goldcoord: 282..353
e-value: 8.4E-34
score: 128.3
IPR001628Zinc finger, nuclear hormone receptor-typePFAMPF00105zf-C4coord: 284..352
e-value: 1.7E-23
score: 82.7
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS00031NUCLEAR_REC_DBD_1coord: 285..311
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS51030NUCLEAR_REC_DBD_2coord: 282..357
score: 18.058
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 282..380
e-value: 2.5E-31
score: 109.7

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold120_size336265-snap-gene-1.12-mRNA-1maker-scaffold120_size336265-snap-gene-1.12-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk08787 ID=Tk08787|Name=Tk08787|organism=Tigriopus kingsejongensis|type=polypeptide|length=528bp
LEFCESQLSKDGFSASVRSVFGKMEAKRRRVLDLLSAGMTVKEVMDIVSS
SRSLVDKVKKLKKDGKPACGRWPSSPDCSPLDYGIWGYVESKACRTPPKS
VSDLKASVEEHWAAMDVDYVGKVCPAFRGRQSSFDDSCFLPDDWNLGQRS
PSVLSVLSSSPISPIHEFYYQQCRRHHLANLHQFVRASIPSVSSAVRRHD
HLSPSQPPSHGLWSASTPASRRSSLTEPSARPRVRHHSQIQAGEFKRRFK
MDPLHVDQEETVETSGGKADNDSNDASDKSLVKLCAVCGDKALGYNFNAL
TCESCKAFFRRNALKNKDFKCPFSNKCEVTVVTRRFCQKCRLKKCFDIGM
KKEWILSDEEKQQKRMKIEENRAKKRHDGPGSHENSLESPGPDLSTGSQP
PPLVFTINNDSSSLERPQARVLPSSRTPTLEDGEPLAKSPRLLDPEASSS
QSSPPQFTLIKHELTTSNSPPQNPTLAPLPEALYVQPNLMAFEVQETQID
PSRTGFPSNEPETPGLDLTTLVPPPIPH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001628Znf_hrmn_rcpt
IPR013088Znf_NHR/GATA
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003700DNA-binding transcription factor activity
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
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