Tk10074, Tk10074 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk10074
Unique NameTk10074
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length744
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 213..233
NoneNo IPR availableGENE3D3.30.160.60coord: 158..233
e-value: 7.1E-14
score: 53.7
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 134..159
e-value: 3.0E-4
score: 21.0
coord: 45..69
e-value: 3.3E-4
score: 20.8
NoneNo IPR availableGENE3D3.30.160.60coord: 70..100
e-value: 5.3E-10
score: 40.9
coord: 101..135
e-value: 3.5E-10
score: 41.4
NoneNo IPR availableGENE3D3.30.160.60coord: 31..69
e-value: 1.2E-9
score: 39.8
NoneNo IPR availableGENE3D3.30.160.60coord: 136..157
e-value: 5.7E-7
score: 31.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 234..264
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 236..264
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 134..159
e-value: 0.49
score: 19.5
coord: 195..219
e-value: 0.051
score: 22.7
coord: 75..99
e-value: 0.0075
score: 25.5
coord: 45..69
e-value: 0.014
score: 24.5
coord: 165..189
e-value: 0.03
score: 23.5
coord: 105..129
e-value: 0.026
score: 23.7
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 77..99
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 167..189
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 107..129
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 197..219
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 47..69
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 105..134
score: 10.201
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 195..224
score: 10.845
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 45..74
score: 13.921
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 165..194
score: 14.087
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 75..104
score: 14.939
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 134..164
score: 14.815
IPR029796Metal regulatory transcription factor 1PANTHERPTHR44900FAMILY NOT NAMEDcoord: 41..225
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 85..143
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 145..199
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 41..86

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold163_size295297-processed-gene-0.1-mRNA-1snap_masked-scaffold163_size295297-processed-gene-0.1-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk10074 ID=Tk10074|Name=Tk10074|organism=Tigriopus kingsejongensis|type=polypeptide|length=744bp
MRDNTDEMLDLKQEESWGEIEELDTKDLEPDTQVESPNSSRLKRYCCDFP
ECGRAYTTQGNLRTHQKTHTGDYKFKCQADNCNKAFLSSYSLKVHVRIHT
KEKPFVCQVEGCLNAFTTLYRLNAHMRLHNGNTFDCDFEGGCFKVFTTRS
DLKKHTRTHTNERPYACKQSGCGKSFMISHHLKNHYKSHSDHKPFECSIP
ECEQSFKSKYARRNHEKKHQEEEEEEMRDLLRRAGTHSQVPSSLHITQQP
RLTSPSLSSVASSTSPGLISLGPLKLEELSPSIQNPPSNCSQSSNCSPLL
QPRHAAHHSPAYSNLGLVGSFVPIPSSTPMSSFPNSPTIQHPPSFPIPRV
PMTQPHFTPPRAFEPPQSHYQVDHPMDQSFLTYAQQYDRDQMSEPFPSTS
STIPTTVQPTADLQYAMAAPEEDDLFDLPFEEMEELSTVCTATALPCENY
SVMGTFAPELTSECQDLRVHWPQTHLGSARSVSSNESGPEHFPVTIEEHP
TYVNNNLFPRLQEYNTAFVSSEEECETPISFAALAPMSVQASCWSDEDTN
PYQQPISVQEPASLGSETNDFGCTAFAILPNPCHAAMRCSEDVFYSGRQS
LALEESMAYCVEEGLDFDFEALQEEAQARDVLSANIRGSLCSVMVEEAAT
YVSETGILQEENVPSQADQKVEEGLMKMASVTSLPVVFEEELNELKLDQE
WLEMMAVPNEAQVTEISDSSEKHSFESEVNICPSDQFCIHSPHM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR029796Metal_TF1
IPR036236Znf_C2H2_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
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