Tk10363, Tk10363 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk10363
Unique NameTk10363
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length881
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 153..180
NoneNo IPR availableCOILSCoilCoilcoord: 266..286
NoneNo IPR availableCOILSCoilCoilcoord: 564..584
NoneNo IPR availableCOILSCoilCoilcoord: 782..802
NoneNo IPR availableCOILSCoilCoilcoord: 124..148
NoneNo IPR availableCOILSCoilCoilcoord: 83..103
NoneNo IPR availableCOILSCoilCoilcoord: 737..778
NoneNo IPR availableCOILSCoilCoilcoord: 596..623
NoneNo IPR availableGENE3D1.20.5.730coord: 763..808
e-value: 2.8E-16
score: 60.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 716..732
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 716..739
NoneNo IPR availablePANTHERPTHR31179:SF7RABAPTIN RAB EFFECTORcoord: 86..879
NoneNo IPR availablePANTHERPTHR31179RAB GTPASE-BINDING EFFECTOR PROTEINcoord: 86..879
NoneNo IPR availableCDDcd15739FYVE_RABE_uncharcoord: 802..874
e-value: 1.81378E-45
score: 155.192
NoneNo IPR availableSUPERFAMILY103652G protein-binding domaincoord: 763..812
IPR003914RabaptinPRINTSPR01432RABAPTINcoord: 644..664
score: 38.1
coord: 160..178
score: 31.58
coord: 592..614
score: 34.78
coord: 467..487
score: 38.1
IPR000306FYVE zinc fingerSMARTSM00064fyve_4coord: 800..867
e-value: 3.1E-19
score: 79.9
IPR000306FYVE zinc fingerPFAMPF01363FYVEcoord: 804..865
e-value: 1.0E-12
score: 47.9
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 809..866
e-value: 3.5E-14
score: 54.6
IPR015390Rabaptin, GTPase-Rab5 binding domainPFAMPF09311Rab5-bindcoord: 511..800
e-value: 9.2E-46
score: 156.5
IPR018514Rabaptin coiled-coil domainPFAMPF03528Rabaptincoord: 234..285
e-value: 5.0E-9
score: 35.3
IPR017455Zinc finger, FYVE-relatedPROSITEPS50178ZF_FYVEcoord: 808..866
score: 12.088
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 804..869

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold2236_size18378-snap-gene-0.6-mRNA-1maker-scaffold2236_size18378-snap-gene-0.6-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk10363 ID=Tk10363|Name=Tk10363|organism=Tigriopus kingsejongensis|type=polypeptide|length=881bp
LKHWREEAKWRPLNHPEPARQSRTRRWASSAGIPGPTLRRGRRAQNWFSG
VVRLLGRGPPSMSEAEGTGSDPATDESGGGDQRQALEAEVQLLRRQLLVQ
ERDLGESRSEVAVAECLRESLIHLERIKKSQDEELATLQQLLNESHDEAS
ANRTRFEHELAKTRAIISQLEHENQELKISLKLGGRGGAVSAAMGQVGEA
GVLDKETISQISDATKSFARRMKSNIQTAVIRPSGSSKAELEDNMKRAYE
DTELLKSIVVPLEEQITALKDKLRETDTLLREQEQRQGQTLLGVEALATW
LNGQSMEEAMSTLLAKSNHTELEEAKSDARDQLYMGLLSTRYSLMNSELA
AMRREHAETVDLLQNERQASKRLRHEAVINTSELVRVQREHLNEITRLQS
VLTPEQKQEIMKPQSPPTSPVGLRHRESRTELISPSADSEPVKHSNSSPA
TSSADSSPAHDDGSAKSDDDSVNMARIVSSAEWEDMQKELCKVRALLGVG
AGDSVVGSDQYRELQRELIEARKQKTVLGKSEVRLKEIIETEAASRRETE
QLWNERSEFHKTETEDLTSKLADLEALFEQIRLNYQATYEATRKDLFALS
ADREKIVRELKRLQNEVEILIGKHESRAAEMQNEVINLPDKTEDMQLLLL
KYREDLITAKVARERVDEKLRSETALWRTQLQGEQQAKESIEDQLTNEIE
ALKATLTHHQRYKKALEGEQAKRKEIEGAQKKQKESQATLQTQMEAHLNE
KQALERQLFEMRNKVRNLQQELDNTVAVQTDFVRLSQSLQMELEKIRQAE
KEVRWQHEDDVDACQSCRIGLSATKRKHHCRHCGKIFCSDCVRKNVPSGP
KQRLCKVCEVCHTLLNRNSAPYFASEAPQVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003914Rabaptin
IPR000306Znf_FYVE
IPR013083Znf_RING/FYVE/PHD
IPR015390Rabaptin_Rab5-bd_dom
IPR018514Rabaptin_coiled-coil
IPR017455Znf_FYVE-rel
IPR011011Znf_FYVE_PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005096GTPase activator activity
GO:0046872metal ion binding
GO:0008083growth factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006897endocytosis
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