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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001680 | WD40 repeat | SMART | SM00320 | WD40_4 | coord: 207..244
e-value: 250.0
score: 1.9
coord: 249..284
e-value: 25.0
score: 8.2
coord: 329..368
e-value: 2.2E-7
score: 40.5
coord: 287..326
e-value: 17.0
score: 9.3 |
| IPR001680 | WD40 repeat | PFAM | PF00400 | WD40 | coord: 338..368
e-value: 6.2E-5
score: 23.6 |
| IPR001680 | WD40 repeat | PROSITE | PS50082 | WD_REPEATS_2 | coord: 336..377
score: 14.719 |
| IPR012952 | BING4, C-terminal domain | SMART | SM01033 | BING4CT_2 | coord: 417..495
e-value: 1.3E-52
score: 190.7 |
| IPR012952 | BING4, C-terminal domain | PFAM | PF08149 | BING4CT | coord: 417..494
e-value: 1.0E-34
score: 118.1 |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | GENE3D | 2.130.10.10 | | coord: 154..451
e-value: 1.3E-29
score: 105.4 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 562..587 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 571..587 |
| None | No IPR available | PANTHER | PTHR14085 | WD-REPEAT PROTEIN BING4 | coord: 38..586 |
| None | No IPR available | PRODOM | PD023243 | | coord: 390..493
e-value: 7.0E-35
score: 373.0 |
| IPR019775 | WD40 repeat, conserved site | PROSITE | PS00678 | WD_REPEATS_1 | coord: 355..369 |
| IPR017986 | WD40-repeat-containing domain | PROSITE | PS50294 | WD_REPEATS_REGION | coord: 252..377
score: 15.926 |
| IPR036322 | WD40-repeat-containing domain superfamily | SUPERFAMILY | 50978 | WD40 repeat-like | coord: 178..446 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk11067 ID=Tk11067|Name=Tk11067|organism=Tigriopus kingsejongensis|type=polypeptide|length=587bp
MGRYFSAEGDPPQSAEPGVFQIGAQEIKEAHKLQTRKRKSREARAKKKDL
GLDPRRRLGKAKGQTGASSKTPKGRKGSQPVAVLIEPKPEEYTTGPGVKK
RHVKTKFRQKEVQRREEQIEMAEELAGKAEILLDEDEGVLEGDDIQEFTA
TITQTQIKQNVDTVSAAKGFELNLAQFGPYKLDYTRNGRYLVLGGRRGHV
AAFDWVSKNLMCEINVQESVHDVKWLHTENMFAVAQKKWTYIYDNQGIEI
HCLKRLDNVLKLEFLPYHFLLASGSETGFLSWVDISLGKLVSQFNAKLGP
LGAMCQNPSNATLCAGHGKGIVTMWTPNMKEPAAKMLAHRQAVRSVAVDR
SGTYMATASTDRSLKIWDIRQFKCLQDYRINAGASQLEFSGRGLLGVAMG
NMVEVYKDCCSQTVKYPYMRHRVFRRITDLHFSPYEDVMGIGHEAGFSSI
LVPGSGDPNFDALEVNPFQTKKQRKEAEVKALLEKIPPELISLDPTQLGD
VDVKTYEEKVAERNSKLFIKPLNVDFEPRYKMKGKGGTAKRFHIKRTVRE
ETKMRDLNQKLAAVTETSRVGKAKQAKKPKSLLDRLK back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
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| GO:0005515 | protein binding |
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