Tk11072, Tk11072 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11072
Unique NameTk11072
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length1482
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01537INTRLKN1R1Fcoord: 1092..1116
score: 24.0
coord: 1117..1144
score: 22.86
coord: 1153..1178
score: 26.73
coord: 1024..1052
score: 17.59
NoneNo IPR availableSMARTSM00364LRR_bac_2coord: 873..892
e-value: 520.0
score: 0.6
coord: 426..445
e-value: 44.0
score: 8.8
coord: 278..297
e-value: 69.0
score: 7.3
coord: 254..273
e-value: 440.0
score: 1.2
coord: 154..173
e-value: 170.0
score: 4.3
coord: 613..632
e-value: 120.0
score: 5.6
coord: 178..197
e-value: 270.0
score: 2.8
coord: 849..868
e-value: 560.0
score: 0.4
coord: 377..396
e-value: 300.0
score: 2.4
coord: 593..610
e-value: 140.0
score: 5.0
coord: 521..544
e-value: 230.0
score: 3.3
coord: 473..492
e-value: 180.0
score: 4.1
coord: 897..916
e-value: 50.0
score: 8.3
coord: 402..421
e-value: 71.0
score: 7.2
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 328..349
e-value: 41.0
score: 10.5
coord: 593..612
e-value: 87.0
score: 7.9
coord: 254..269
e-value: 760.0
score: 0.2
coord: 849..870
e-value: 150.0
score: 5.9
coord: 449..470
e-value: 29.0
score: 11.8
coord: 873..895
e-value: 270.0
score: 3.8
coord: 278..304
e-value: 260.0
score: 4.0
coord: 566..584
e-value: 670.0
score: 0.7
coord: 154..180
e-value: 53.0
score: 9.6
coord: 230..251
e-value: 640.0
score: 0.9
coord: 206..227
e-value: 230.0
score: 4.5
coord: 402..434
e-value: 510.0
score: 1.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1395..1482
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1455..1482
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1395..1410
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1417..1443
NoneNo IPR availablePANTHERPTHR44740FAMILY NOT NAMEDcoord: 27..1258
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..1017
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1044..1482
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1018..1043
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 30..34
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 772..948
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 352..688
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 99..398
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 1021..1043
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 378..400
e-value: 0.41
score: 19.7
coord: 279..301
e-value: 6.0
score: 15.1
coord: 521..543
e-value: 8.7
score: 13.8
coord: 353..376
e-value: 0.037
score: 23.2
coord: 849..872
e-value: 8.6
score: 13.8
coord: 403..425
e-value: 6.0
score: 15.1
coord: 614..636
e-value: 19.0
score: 10.9
coord: 178..201
e-value: 400.0
score: 0.1
coord: 426..448
e-value: 140.0
score: 3.8
coord: 231..253
e-value: 40.0
score: 8.4
coord: 498..520
e-value: 6.4
score: 14.9
coord: 254..277
e-value: 0.0024
score: 27.1
coord: 302..327
e-value: 8.8
score: 13.7
coord: 897..920
e-value: 4.3
score: 16.2
coord: 207..229
e-value: 81.0
score: 5.8
coord: 328..351
e-value: 3.1E-5
score: 33.4
coord: 544..566
e-value: 81.0
score: 5.8
coord: 101..123
e-value: 49.0
score: 7.6
coord: 154..177
e-value: 0.0048
score: 26.1
coord: 873..896
e-value: 0.42
score: 19.7
coord: 473..496
e-value: 0.37
score: 19.9
coord: 449..472
e-value: 0.053
score: 22.7
IPR000372Leucine-rich repeat N-terminal domainSMARTSM00013lrrnt1coord: 768..806
e-value: 3.9E-5
score: 33.1
IPR000483Cysteine-rich flanking region, C-terminalSMARTSM00082lrrct1coord: 676..731
e-value: 0.0046
score: 26.2
IPR000157Toll/interleukin-1 receptor homology (TIR) domainSMARTSM00255till_3coord: 1079..1216
e-value: 5.3E-16
score: 69.2
IPR000157Toll/interleukin-1 receptor homology (TIR) domainPFAMPF01582TIRcoord: 1080..1200
e-value: 5.4E-10
score: 39.3
IPR000157Toll/interleukin-1 receptor homology (TIR) domainPROSITEPS50104TIRcoord: 1078..1212
score: 23.815
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 584..747
e-value: 1.2E-21
score: 78.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 481..583
e-value: 7.2E-20
score: 73.0
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 760..988
e-value: 5.7E-38
score: 132.0
coord: 352..480
e-value: 5.7E-32
score: 112.4
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 35..202
e-value: 1.7E-17
score: 64.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 203..351
e-value: 2.1E-32
score: 113.7
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 330..350
e-value: 0.094
score: 13.2
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 475..534
e-value: 4.8E-13
score: 48.6
coord: 851..910
e-value: 8.6E-10
score: 38.1
coord: 354..415
e-value: 3.8E-13
score: 48.9
coord: 257..315
e-value: 4.9E-11
score: 42.1
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 180..201
score: 5.879
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 875..896
score: 6.364
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 568..589
score: 7.827
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 639..659
score: 5.14
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 851..872
score: 7.358
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 451..472
score: 6.965
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 330..351
score: 8.567
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 208..229
score: 6.534
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 475..496
score: 6.187
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 355..376
score: 6.303
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 593..614
score: 6.826
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 523..544
score: 7.519
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 280..301
score: 5.741
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 156..177
score: 7.72
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 304..317
score: 4.678
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 499..520
score: 6.803
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 102..123
score: 6.449
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 428..449
score: 6.865
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 899..920
score: 6.495
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 232..253
score: 6.126
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 546..566
score: 4.632
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 615..636
score: 6.187
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 404..425
score: 7.365
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 379..400
score: 7.319
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 256..277
score: 5.64
IPR035897Toll/interleukin-1 receptor homology (TIR) domain superfamilyGENE3D3.40.50.10140coord: 1075..1213
e-value: 1.6E-30
score: 107.9
IPR035897Toll/interleukin-1 receptor homology (TIR) domain superfamilySUPERFAMILY52200Toll/Interleukin receptor TIR domaincoord: 1071..1216

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold23_size669530-snap-gene-4.7-mRNA-1maker-scaffold23_size669530-snap-gene-4.7-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11072 ID=Tk11072|Name=Tk11072|organism=Tigriopus kingsejongensis|type=polypeptide|length=1482bp
MMSLPIILPKMNVPMGVVLILGIISLCSLAGVSSTRCNYEPTESSLDCQI
RVLQNVAQLEVEEVFLGQTEKRIDHLNVKCSDIFFSESEVGPELFKGEMN
RNLESLTIHYCKIKDIPSNTFVHLQSLRRLAIQSHNEEWDGSIMEVEPHA
LRALASLEQLDLSFNNIWTLPNGLICDLAHLELANFSHNHLVEVSDLGLS
PIHSCQTGLTTLDLSSNAIAALRDSDLKLASKLVVLNLGQNRLTILGDKA
LAPLTALEEISLADNQLAALPPTIFNQSQALKRLFLQNNSLSLLPGGVFE
GLSSLIVLNLSRNAIANHLLAADTFSGLRNLEVLDLSWNQITQIDRETFH
SHLPRLRRLLLEHNQIHSVDASSFGHQPLLQVLVLSHNKIESLAEDAFRG
LEQNLTSLSLNHNELVKVPDSIFRLTPQLEDLSLDNNHLIEVPSSIGHLK
RLKTLDLGENAITELQEGDFNAMESLYGLRLAGNRLTRIPSNFFANASQL
HVLNLARNQLSQIEQKAFDHLQELRALRLDNNQLTDINGVLSSLSHLQWF
NLSSNQLAWFDFAFIPKSLEMLDLHDNRMEELGNYYKLKSGFNIKTLDAS
ANRIKKLSKLSLPASLETIILNENQIETIPIKLFEDKPNLARVDLRANAI
SHLTLDSLFISKVPIKAHPQFLLSGNPFSCDCEMEWLQQINEIALNGNHP
QVTDLDAITCQLPNNGGQNVSSMTSSSSASAPIPISELAQDDFLCPYKTH
CFPQCMCCDFFACDCRMQCPEGCTCFHDSDWSVNRIQCSNRNHTDVPLLI
PMDATQIHLDGNQLGDVDTQSFIGRRRVTALYMNASKITSISQETLGGLA
NLEVLHLEDNQLKELIGHEFETLSGLKELYLQNNDLIHIGESVFGLLTSL
TTLRLDGNLLTSFPVWDLMGTHRHPFLISLSLGENMWSCECEFLTPFITF
LRTFGEHITDADAINCVTNELTVESLHNKKNQLSLCSTATGSASVDKDQT
SKEQQALLKLDEAVNPSFLPILIGTIVALVVVVVVVCLLVCLFRVKIQTW
LYNKTSEIYDSRSGSSIHSVGSCYAQNKLFDVYISYSIKDADFVDQNLAP
TLEHGATSYKLCLHQRDFPPSASLYDTVSVATESSSRVLLVLSRSYLDTE
WPHVKIPLRNALSKESSKLIILFLEDISEDELSSYQELRQYLENCTSVKW
GSPGFLNKLRFFLPEPAFLTFHRNVTLRTLQPASPVQHAGLGGPSSGSVG
HIKSNSLVQVDQVSGVWTYAINNSPVGSVATQSTTADGFPASKYLSASGH
HPMAVAATTQSGAPLRNAPSVVSSVYSHHTYQSIPESHHIYHTLEPSLLP
MAGDFREDKGHPHLRPKRTSGSRHMRVNEPLNAVYINRNLDLVLKSPPTP
SPSSSIGEESSTFRRSEDSNSPKTTTPSSSPHSSTSCASSVASSAEEELC
HHAHTHSTLSGQQLLPSHTSSSSAQNEDEYIV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR000372LRRNT
IPR000483Cys-rich_flank_reg_C
IPR000157TIR_dom
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt
IPR035897Toll_tir_struct_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
Add to Basket