Tk11157, Tk11157 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11157
Unique NameTk11157
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length783
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000408Regulator of chromosome condensation, RCC1PRINTSPR00633RCCNDNSATIONcoord: 31..47
score: 43.14
coord: 129..145
score: 32.35
coord: 238..256
score: 37.72
coord: 12..25
score: 32.14
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 147..192
e-value: 6.5E-8
score: 33.0
coord: 28..87
e-value: 2.9E-8
score: 34.1
coord: 90..139
e-value: 1.3E-11
score: 44.8
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 129..139
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 77..87
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 249..296
score: 9.057
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 196..248
score: 8.775
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 29..90
score: 14.142
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 144..195
score: 11.409
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 91..142
score: 15.489
IPR000569HECT domainSMARTSM00119hect_3coord: 431..774
e-value: 7.1E-69
score: 244.8
IPR000569HECT domainPFAMPF00632HECTcoord: 466..765
e-value: 5.9E-55
score: 186.8
IPR000569HECT domainPROSITEPS50237HECTcoord: 433..769
score: 43.563
NoneNo IPR availablePFAMPF13540RCC1_2coord: 232..257
e-value: 4.8E-5
score: 23.0
NoneNo IPR availableGENE3D3.30.2410.10coord: 657..767
e-value: 1.8E-28
score: 100.8
NoneNo IPR availableGENE3D3.90.1750.10coord: 621..655
e-value: 6.4E-33
score: 116.1
coord: 420..544
e-value: 6.4E-33
score: 116.1
NoneNo IPR availableGENE3D3.30.2160.10coord: 545..620
e-value: 6.4E-33
score: 116.1
NoneNo IPR availablePANTHERPTHR22870:SF188E3 UBIQUITIN-PROTEIN LIGASE HERC1-RELATEDcoord: 609..776
coord: 374..565
NoneNo IPR availablePANTHERPTHR22870:SF188E3 UBIQUITIN-PROTEIN LIGASE HERC1-RELATEDcoord: 6..351
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 6..351
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 609..776
coord: 374..565
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 3..295
e-value: 8.1E-84
score: 283.5
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 16..295
IPR035983HECT, E3 ligase catalytic domainSUPERFAMILY56204Hect, E3 ligase catalytic domaincoord: 423..763

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold259_size234575-snap-gene-1.26-mRNA-1maker-scaffold259_size234575-snap-gene-1.26-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11157 ID=Tk11157|Name=Tk11157|organism=Tigriopus kingsejongensis|type=polypeptide|length=783bp
MLLSPGFSICQLASSKSGEGHTLALATSGEVFSWGDGDWGKLGHGNSDRV
RRPRPITTLRHHSGSDPQDSALNIRFVATGFRHSALISKEGHVYTFGKGD
LGALGHGTTSTLRQPHLVADLTRRKIGLVACGSNHTVCVSRDGLQSWSFG
GNECGQLGIGSTAGALSPKRIESLNGLQVKKVSLGDAFSVFLTSKGQVLT
CGQHKMTGLPQILTNLHRPTQIPAFELEHVFIVDITVGATHTLALSNKGE
VWIWGRDGLESPDAWVLQPRIVADLSHKFILQISAGSYHSIAWTTPPLQP
TFDDTPHLPNLGLPAAVPPKFTLLANISIHALRDRLKVLYLASNLVAQSW
KFYPSVEDRNLLEPLARDEIRLILSQKVYTLPLVQILQKTMTSSRNLWPQ
VVVRRLHLPSEHNDENCPKTIFAQIAKQVQKLEPAELRFQDRAWKVKLMG
EGADDAGGVFDDIMTEMCRELIDAKSGLQLLIPTPNGVTNIGLNRDTFLL
NSRKSSSHDLRNFWFIGILCGVAIRTRKPIALNLAPFVWKMIVGSQITWN
DLDEVDLNYARSLKSLDDPHLAENHLLPNEYFQGIAFAGQMVSLLPEQLV
LKPQDCPDYVQAAFEQRIREMLPQVKALREGLGGIVPFPILGLMPAKALE
ELVCGQPSISLTALKKAARYRDFDPSHPIIVWFWDILDHFTEEERVLFVI
FVSGRSRLPNNLADLPQRFQILRVDRPENGLPTAQTCFFQLRLPPFTSQA
IMQEKLRYAIYHCRSIDMDQYMLRRDSANGTPN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000408Reg_chr_condens
IPR000569HECT_dom
IPR009091RCC1/BLIP-II
IPR035983Hect_E3_ubiquitin_ligase
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
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