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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR000772 | Ricin B, lectin domain | SMART | SM00458 | ricin_3 | coord: 497..621
e-value: 4.2E-8
score: 42.9 |
| IPR000772 | Ricin B, lectin domain | PFAM | PF00652 | Ricin_B_lectin | coord: 500..615
e-value: 2.7E-11
score: 43.7 |
| IPR000772 | Ricin B, lectin domain | PROSITE | PS50231 | RICIN_B_LECTIN | coord: 492..621
score: 12.406 |
| IPR000772 | Ricin B, lectin domain | CDD | cd00161 | RICIN | coord: 499..620
e-value: 9.06921E-11
score: 57.5154 |
| None | No IPR available | GENE3D | 2.80.10.50 | | coord: 495..627
e-value: 2.8E-14
score: 55.2 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 74..101 |
| None | No IPR available | PANTHER | PTHR11675 | N-ACETYLGALACTOSAMINYLTRANSFERASE | coord: 79..619 |
| None | No IPR available | PANTHER | PTHR11675:SF63 | POLYPEPTIDE N-ACETYLGALACTOSAMINYLTRANSFERASE | coord: 79..619 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 20..41 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 1..19 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 42..627 |
| None | No IPR available | CDD | cd02510 | pp-GalNAc-T | coord: 165..462
e-value: 9.53079E-166
score: 473.23 |
| None | No IPR available | TMHMM | TMhelix | | coord: 20..42 |
| IPR001173 | Glycosyltransferase 2-like | PFAM | PF00535 | Glycos_transf_2 | coord: 165..349
e-value: 7.0E-29
score: 100.7 |
| IPR029044 | Nucleotide-diphospho-sugar transferases | GENE3D | 3.90.550.10 | | coord: 99..469
e-value: 1.7E-155
score: 519.5 |
| IPR029044 | Nucleotide-diphospho-sugar transferases | SUPERFAMILY | 53448 | Nucleotide-diphospho-sugar transferases | coord: 141..463 |
| IPR035992 | Ricin B-like lectins | SUPERFAMILY | 50370 | Ricin B-like lectins | coord: 494..621 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk11293 ID=Tk11293|Name=Tk11293|organism=Tigriopus kingsejongensis|type=polypeptide|length=627bp
MISLLVLHKMWPRSRRVRTALQLVGVGIFLWLALGTLMPSWSDLEAVERI
KAMQRRQRARPELDYQASAILGPNEVGPRAHKRPLAPASRPARFQPSPAP
SGEVWDDLGVARNNREVEERELGYRTYAFNTLVSRRIGWHRDLPDTRHKA
CAQLTYPAADLPTASVIICYFHEEWHTLLRTVYSVLERSPAHLLREIILV
DDHSDIDIAANLTQHFRQHKLDAVVKVISSAERLGLIRARIWGAREATGD
VLVFLDSHVEANAQWLEPLLTRIHENRTRVVTPIIDIINADTFKYESSPL
VRGGFNWGLHFKWDSVTRDLLPDEASFARPIPSPTMAGGLFAMDRNYFHT
LGEYDPGLEIWGGENLELSFRVWMCGGSLEIIPCSRVGHVFRKRRPYGAD
QADSMIRNSVRVARVWMDDYIEHYFRINPDARDVDYGDVSSRLELRKHLQ
CQDFKWYMANVYPQLKVPSAEEANNPVVQADRIRFQPWNQRKRKYVRSFV
IRLSGTRMCVRSAGDPSAKKALLVLGPCLRNKEYMWYETDKQELILAQLL
CLDADGKDRRPKLMKCHELRGYQEWKFRPGPASAIYNMAAGMCLSPIERK
LGGKVVLDVCSEEGSHTWDLTEMDQEL back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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