|
|
Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 190..210 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 490..513 |
| None | No IPR available | PANTHER | PTHR12673:SF58 | FERM, RHOGEF AND PLECKSTRIN DOMAIN-CONTAINING PROTEIN 2 | coord: 124..635 |
| None | No IPR available | PANTHER | PTHR12673 | FACIOGENITAL DYSPLASIA PROTEIN | coord: 124..635 |
| None | No IPR available | CDD | cd01220 | PH1_FARP1-like | coord: 357..464
e-value: 6.20263E-55
score: 180.589 |
| None | No IPR available | CDD | cd13235 | PH2_FARP1-like | coord: 538..635
e-value: 4.89292E-59
score: 190.993 |
| None | No IPR available | SUPERFAMILY | 50729 | PH domain-like | coord: 342..465 |
| None | No IPR available | SUPERFAMILY | 50729 | PH domain-like | coord: 488..635 |
| IPR000219 | Dbl homology (DH) domain | SMART | SM00325 | RhoGEF_3 | coord: 142..332
e-value: 2.0E-34
score: 130.4 |
| IPR000219 | Dbl homology (DH) domain | PFAM | PF00621 | RhoGEF | coord: 142..330
e-value: 3.5E-30
score: 105.5 |
| IPR000219 | Dbl homology (DH) domain | PROSITE | PS50010 | DH_2 | coord: 138..333
score: 28.307 |
| IPR000219 | Dbl homology (DH) domain | CDD | cd00160 | RhoGEF | coord: 140..331
e-value: 1.69518E-35
score: 130.11 |
| IPR001849 | Pleckstrin homology domain | SMART | SM00233 | PH_update | coord: 540..638
e-value: 3.5E-14
score: 63.1
coord: 364..462
e-value: 1.1E-12
score: 58.1 |
| IPR001849 | Pleckstrin homology domain | PFAM | PF00169 | PH | coord: 542..631
e-value: 1.9E-11
score: 44.3
coord: 365..459
e-value: 2.3E-8
score: 34.4 |
| IPR001849 | Pleckstrin homology domain | PROSITE | PS50003 | PH_DOMAIN | coord: 363..460
score: 12.847 |
| IPR001849 | Pleckstrin homology domain | PROSITE | PS50003 | PH_DOMAIN | coord: 539..636
score: 13.188 |
| IPR011993 | PH-like domain superfamily | GENE3D | 2.30.29.30 | | coord: 539..638
e-value: 5.1E-25
score: 89.6 |
| IPR035899 | Dbl homology (DH) domain superfamily | GENE3D | 1.20.900.10 | | coord: 131..343
e-value: 1.2E-38
score: 134.8 |
| IPR035899 | Dbl homology (DH) domain superfamily | SUPERFAMILY | 48065 | DBL homology domain (DH-domain) | coord: 129..350 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk11543 ID=Tk11543|Name=Tk11543|organism=Tigriopus kingsejongensis|type=polypeptide|length=651bp
LDAGPQPLNSEATQRYADTANDVYASVVANNLSTEVTYSPTNNNYSGIEA
HPRHQTPTSGSYSLEDSRLTDTPTMSLSSPFGPGGGNNYPTHHPTGVPSP
LKFIRDDSVDGTLSPVSSKSAGTDTDVELNKKKYPVDRCYFIAKEILMTE
RTYKKDLEIINLWFRDEVTKEEDMPEELLTLIFSHFDPIYEAHCRLLKDI
EQNMAQWESRGSISTQNNPEATQIGNLILRMFDVMTLDHYLRYLDAHADI
LEKLEHTLGADIRFQQVCKDFESQKVCYLPITSLLLKPLHRIIHYDLLLE
RILQTYNSNHPDYQNANMAMIKMQTIIRKMQEKLPDSENFVKLAELQRDV
GPSFEGVLISQRHFIREGCLLKLSRKGYQQRMFFLFSDLLLYSNRTTNPT
LHFRVHGQLLVKDLSILESEPRMGAEHCFNIYDGKKAILVAAGSQAEKIQ
WMEDISDAIQAAKEANHLNGSNHGPSSNQHKFMSLKSISGSDDGLDKNDS
HGTLDGRHGSNAQRTNSSVHVCWHRSTTMSAKEYHISIQTLLSGYLLRKF
KNSNGWQKLWVVFTNSCLFFYKTFQDDFPLASLPLLGYGVFSPCPEDEIH
KDFVFKLQFKNHVYFFRAESQYTYERWIEVLGTSTQVGLDLEVPVHNKNG
Y back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0035023 | regulation of Rho protein signal transduction |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005089 | Rho guanyl-nucleotide exchange factor activity |
|
