Tk11693, Tk11693 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11693
Unique NameTk11693
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length276
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005819Histone H5PRINTSPR00624HISTONEH5coord: 112..126
score: 48.89
coord: 75..99
score: 52.89
coord: 6..27
score: 36.87
coord: 33..50
score: 54.32
coord: 168..187
score: 30.56
IPR005818Linker histone H1/H5, domain H15SMARTSM00526h15plus2coord: 17..83
e-value: 1.1E-30
score: 117.9
IPR005818Linker histone H1/H5, domain H15PFAMPF00538Linker_histonecoord: 20..91
e-value: 1.5E-30
score: 105.2
IPR005818Linker histone H1/H5, domain H15PROSITEPS51504H15coord: 19..93
score: 33.809
IPR005818Linker histone H1/H5, domain H15CDDcd00073H15coord: 17..91
e-value: 2.85767E-34
score: 117.337
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 18..92
e-value: 6.0E-31
score: 108.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..182
NoneNo IPR availablePANTHERPTHR11467:SF90HISTONE H1coord: 6..187
NoneNo IPR availablePANTHERPTHR11467HISTONE H1/H5coord: 6..187
NoneNo IPR availableSIGNALP_GRAM_POSITIVESignalP-TMSignalP-TMcoord: 1..29
score: 0.45
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 18..105

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold578_size132436-snap-gene-0.33-mRNA-1maker-scaffold578_size132436-snap-gene-0.33-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11693 ID=Tk11693|Name=Tk11693|organism=Tigriopus kingsejongensis|type=polypeptide|length=276bp
MTDSPAKTKKVAKPKVAATHPPTSVMVMAAVKALKERNGSSLPAIKKYIA
ANYKVDVAKTAHFIKKAVKSLVEKKKLTQTKGTGASGSFKLTTSAKVEKP
KVVKPKKAKTPKKKTATKKVAGEKKAKSPKKKTPAKKAATKKVEKAAVVG
KKPKTPKKKPAVKKAAPAKKVVAKKASPKKRGAPKKNTLATDAAGQLDVL
GHDGHSLGVDGAQVGVLEEADQVSLGGLLESHDGRRLETQVGLEVLSDLT
DQTLEGQLADEQLGGLLVATDLSESH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005819Histone_H5
IPR005818Histone_H1/H5_H15
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006334nucleosome assembly
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