Tk12336, Tk12336 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12336
Unique NameTk12336
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length353
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 239..272
e-value: 3.8E-6
score: 36.4
coord: 205..238
e-value: 2.2E-5
score: 33.9
coord: 111..144
e-value: 9.7E-4
score: 28.4
coord: 171..204
e-value: 0.1
score: 21.7
coord: 36..69
e-value: 8.4E-4
score: 28.6
coord: 70..103
e-value: 0.0069
score: 25.6
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 43..68
e-value: 0.1
score: 12.8
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 205..238
score: 8.703
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 111..144
score: 9.116
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 36..69
score: 10.266
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 171..204
score: 9.411
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 70..103
score: 6.313
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 239..272
score: 10.532
IPR006636Heat shock chaperonin-bindingSMARTSM00727CBMcoord: 300..339
e-value: 8.5E-9
score: 45.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 160..285
e-value: 1.5E-45
score: 156.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 34..159
e-value: 1.3E-38
score: 133.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 170..283
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 35..159
NoneNo IPR availablePFAMPF13424TPR_12coord: 74..138
e-value: 3.4E-9
score: 36.8
NoneNo IPR availableGENE3D1.10.260.100coord: 286..352
e-value: 1.2E-23
score: 84.8
NoneNo IPR availablePANTHERPTHR22904:SF394STRESS-INDUCED-PHOSPHOPROTEIN 1coord: 32..347
NoneNo IPR availablePANTHERPTHR22904TPR REPEAT CONTAINING PROTEINcoord: 32..347
IPR001440Tetratricopeptide repeat 1PFAMPF00515TPR_1coord: 240..272
e-value: 8.3E-8
score: 31.6
coord: 205..238
e-value: 4.8E-8
score: 32.4
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 36..272
score: 32.672

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold198_size266703-snap-gene-0.20-mRNA-1maker-scaffold198_size266703-snap-gene-0.20-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12336 ID=Tk12336|Name=Tk12336|organism=Tigriopus kingsejongensis|type=polypeptide|length=353bp
LTRTTRAFRVPSWVEGVSRSAHCRSVPPPKMSQSEAVAEKQAGNEAYKKK
DFAPAIQHYTRAIELDPSEITFRSNLAAVYFEQKRYEECVATCEAALEVG
RENRADFKLMAKAWARLGQAAKRLGQLERAKMAFEKALTEHRTPDYRTSL
SELESMIKKKNEKDYINPEVAAQEKEQGNERFKVGDFSAAVKHYSEAVKR
NPSDPKIYSNRAACFTKLLSFDLALKDCDRAIELDPKFIKAYLRKAMVHK
GMGQTSKAQAAYEKALELDPNCGEAVEGYRSCAMQSHADPDEVRKRAMSD
PEVQRILNDPAMRMILEQMQSDPNAIQEHLKNPDIAEKFMKLREAGLIQV
GYK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR006636STI1_HS-bd
IPR011990TPR-like_helical_dom_sf
IPR001440TPR_1
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Add to Basket