Tk12557, Tk12557 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12557
Unique NameTk12557
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length544
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011583Chitinase IISMARTSM006362g34coord: 188..518
e-value: 8.4E-78
score: 274.5
IPR001223Glycoside hydrolase family 18, catalytic domainPFAMPF00704Glyco_hydro_18coord: 190..518
e-value: 2.5E-62
score: 211.3
IPR029070Chitinase insertion domain superfamilyGENE3D3.10.50.10coord: 418..488
e-value: 2.6E-100
score: 338.0
IPR029070Chitinase insertion domain superfamilySUPERFAMILY54556Chitinase insertion domaincoord: 419..488
NoneNo IPR availableGENE3D3.20.20.80coord: 489..539
e-value: 2.6E-100
score: 338.0
coord: 191..417
e-value: 2.6E-100
score: 338.0
NoneNo IPR availablePANTHERPTHR11177CHITINASEcoord: 168..541
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 14..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 172..544
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 152..171
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..13
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 94..114
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 115..151
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 35..54
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..74
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 75..93
NoneNo IPR availableTMHMMTMhelixcoord: 145..167
NoneNo IPR availableTMHMMTMhelixcoord: 15..34
NoneNo IPR availableTMHMMTMhelixcoord: 55..77
NoneNo IPR availableTMHMMTMhelixcoord: 92..114
IPR002076ELO familyPFAMPF01151ELOcoord: 24..156
e-value: 4.6E-19
score: 68.8
IPR028538Chitinase-3-like protein 1PANTHERPTHR11177:SF202CHITINASE-3-LIKE PROTEIN 1coord: 168..541
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 188..419
coord: 489..542

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold1273_size51358-snap-gene-0.10-mRNA-1maker-scaffold1273_size51358-snap-gene-0.10-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12557 ID=Tk12557|Name=Tk12557|organism=Tigriopus kingsejongensis|type=polypeptide|length=544bp
MDIMGVPIHRYGEIIYTFLCSYSFPLFVTYLIMVNQIRRIKKMIPEPYDL
KQVMGVYNFVISLVNVYCFVGFLSCLLEASSLYEKTPNPKLTRIFYVYWI
TKVIELLDTVFMILRHKFKQVSLLHVYHHASMLLLSDLGYTRYAWAAFSM
PLMLNALFIWGVLLVLVQLSLATPFETESIDSSNESEYQLMCYYNLWASN
RVGLGRFSPQDIDPQLCTHLIVSFITINEGQVDIESTFENQTHLLDELHT
LGEANPDLKIFAAAGGWEAEGSVLKAISETAEAREVFAKSVVKALEKGKF
QGFVVDWEFPEEDDKADYLALHQELKEELKDFKLGTVISPKPKVLSTAYN
FEELNKVVDFYQLITYDYHGFWDTTAGANAPLFPSSTAQKPALSLSLSVN
SALEQGVPKEKLVVGIGLYGRSAKLTNPEENTFGSLIDGKGTKGEFTNEA
GVLAYFEICKYLMSGKEYNFDDETQTPYVVAGDQWMSFDDMQSIEAKLEW
MSKEHGLKNVFVWALGMDDFSGTQCQASMSFPLVHTIKNFLGAK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011583Chitinase_II
IPR001223Glyco_hydro18_cat
IPR029070Chitinase_insertion_sf
IPR002076ELO_fam
IPR028538CHI3L1
IPR017853Glycoside_hydrolase_SF
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0045766positive regulation of angiogenesis
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0005615extracellular space
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