LiceBase GBrowse

 

 

Browser Select Tracks Snapshots Community Tracks Custom Tracks Preferences

 Search

 Search

Landmark or Region: Examples: scaffold1000_size72005.	Download Decorated FASTA File Download Protein Sequence File Download Sequence File Download Spliced Coding Sequence File Download Track Data
Data Source Atlantic salmon louse genome (LSalAtl2s) Tigriopus kingsejongensis genome	Scroll/Zoom:     Show 500 kbp Show 200 kbp Show 100 kbp Show 50 kbp Show 20 kbp Show 10 kbp Show 5 kbp Show 2.892 kbp Show 2 kbp Show 1 kbp Show 200 bp Show 100 bp     Flip

The following 11 regions match your request.

 

scaffold304_size215464

 

scaffold180_size281610

 

scaffold191_size271209

 

scaffold11_size778918

 

scaffold15_size728074

 

scaffold395_size185061

 

scaffold934_size79169

 

scaffold50_size457468

 

scaffold1518_size37722

 

scaffold170_size291898

 

scaffold1210_size55525

Name	Type	Description	Position	Match Score
39s ribosomal protein mitochondrial	gene	F:structural constituent of ribosome	scaffold304_size215464:21120..24986	n/a
39s ribosomal protein mitochondrial	gene	-	scaffold180_size281610:77826..79504	n/a
39s ribosomal protein mitochondrial	gene	C:intracellular	scaffold191_size271209:4276..16532	n/a
39s ribosomal protein mitochondrial	gene	C:ribosome	scaffold11_size778918:703602..706493	n/a
39s ribosomal protein mitochondrial	gene	-	scaffold15_size728074:3390..4762	n/a
39s ribosomal protein mitochondrial	gene	-	scaffold395_size185061:60422..68608	n/a
39s ribosomal protein mitochondrial	gene	C:ribosome	scaffold934_size79169:73868..74419	n/a
39s ribosomal protein mitochondrial	gene	-	scaffold50_size457468:86069..91749	n/a
39s ribosomal protein mitochondrial	gene	F:structural constituent of ribosome	scaffold1518_size37722:1512..2662	n/a
39s ribosomal protein mitochondrial	gene	C:ribosome	scaffold170_size291898:152598..154620	n/a
39s ribosomal protein mitochondrial	gene	F:structural constituent of ribosome	scaffold1210_size55525:54545..55468	n/a

<< Back to Browser Show Active Tracks Only Show Favorites Only Clear All Favorites

 Tracks

 Tracks

 

 General

 General

 All on All off 

DNA/GC Content

 Genes 

 Genes 

 Coding

 Coding

 All on All off 

CDS [?]

Maker Genes [?]

 RNA

 RNA

 All on All off 

Noncoding RNAs

tRNAs [?]

 Transcript

 Transcript

 All on All off 

transcripts [?]

 Other 

 Other 

 Repeats

 Repeats

 All on All off 

Repeats

 Region 

 Region 

 Region

 Region

 All on All off 

GC Content

 Translation

 Translation

 All on All off 

3-frame translation (forward)

3-frame translation (reverse)

6-frame translation

Snapshots

Snapshot Name

Snapshot Timestamp [GMT]

Community Tracks

Filter: Showing 0 files.

There are no available unused public available tracks. Select "Custom Tracks" to see ones you've already added to your session.

Custom Tracks

[Help with uploading custom tracks]

There are no tracks yet.

Add custom tracks : [From text] [From a URL] [From a file]

Show grid	Image Width 450 640 800 1024 1280 1600 1800 2000 2400	Highlight feature(s) (feature1 feature2...) Clear highlighting
Cache tracks		Highlight regions (region1:start..end region2:start..end) Clear highlighting
Show tooltips		Region Size (bp) 20000 10000 5000 1000

The Generic Genome Browser. For questions about the data at this site, please contact its webmaster (admin@licebase.org). For support of the browser software only, send email to gmod-gbrowse@lists.sourceforge.net or visit the GMOD Project web pages.