EMLSAG00000002306, EMLSAG00000002306-685072 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000002306
Unique NameEMLSAG00000002306-685072
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000002306 vs. GO
Match: - (symbol:CG33225 species:7227 "Drosophila melanogaster" [GO:0005575 "cellular_component" evidence=ND] [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS50240 SMART:SM00020 EMBL:AE013599 GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494 OrthoDB:EOG7RRF7Z GeneTree:ENSGT00540000072294 EMBL:BT032941 RefSeq:NP_995918.2 UniGene:Dm.24593 EnsemblMetazoa:FBtr0300405 GeneID:2768860 KEGG:dme:Dmel_CG33225 UCSC:CG33225-RB FlyBase:FBgn0053225 InParanoid:Q7KVM7 OMA:HSTRITE GenomeRNAi:2768860 NextBio:848353 Uniprot:Q7KVM7)

HSP 1 Score: 43.8986 bits (102), Expect = 7.501e-5
Identity = 29/90 (32.22%), Postives = 50/90 (55.56%), Query Frame = 0 
Query:    8 QILDIEKTVIHEGFD-KTTGVNDIALLKTVGKFTFTDLVLSLCMNID----RSIIHQGANGTISGITNEERKVLRDDRVTIIQTSYKVCR 92
            Q++DI++ +IH  F  +T    DIALL+   K + +D V  +C+++D    RS+ H  A G  +   NE   +L+   VT+ + + K C+
Sbjct:  110 QVIDIDQKIIHGQFGLETVKKYDIALLRLAKKVSISDYVRPICLSVDRQVGRSVQHFTATGWGTTEWNEPSTILQT--VTLSKINRKYCK 197
[Close]
BLAST of EMLSAG00000002306 vs. GO
Match: - (symbol:zgc:153968 "zgc:153968" species:7955 "Danio rerio" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS50240 SMART:SM00020 ZFIN:ZDB-GENE-061027-211 GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494 TreeFam:TF351676 OrthoDB:EOG7RNK07 GeneTree:ENSGT00740000115437 EMBL:CR387996 ProteinModelPortal:F1Q7H9 Ensembl:ENSDART00000139213 ArrayExpress:F1Q7H9 Bgee:F1Q7H9 Uniprot:F1Q7H9)

HSP 1 Score: 43.1282 bits (100), Expect = 1.158e-4
Identity = 27/102 (26.47%), Postives = 48/102 (47.06%), Query Frame = 0 
Query:   18 HEGFDKTTGVNDIALLKTVGKFTFTDLVLSLCMNIDRSIIHQGANGTISGITN------EERKVLRDDRVTII-----QTSYKVCRHPGVFCTGPNTGLKSM 108
            H  +D     NDIALLK     +FTD +  +C+    S + +GA   I+G  +      +    L++ ++ ++     +++Y      G+ C GPN G K +
Sbjct:  115 HPKYDSAKNKNDIALLKLSTPVSFTDYIKPVCLTASGSSLGKGAVSWITGWGSINTGGTQFPTTLQEVKIPVVSNGDCKSAYGSLITDGMICAGPNEGGKGI 216
[Close]
BLAST of EMLSAG00000002306 vs. GO
Match: - (symbol:zgc:101788 "zgc:101788" species:7955 "Danio rerio" [GO:0030247 "polysaccharide binding" evidence=IEA] [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006955 "immune response" evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA] [GO:0005044 "scavenger receptor activity" evidence=IEA] [GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001212 InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR018114 Pfam:PF00089 Pfam:PF01033 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS50240 PROSITE:PS50958 SMART:SM00020 SMART:SM00201 ZFIN:ZDB-GENE-050320-109 GO:GO:0006955 GO:GO:0030247 GO:GO:0006508 GO:GO:0004252 GO:GO:0005044 GO:GO:0006898 SUPFAM:SSF50494 eggNOG:COG5640 HOVERGEN:HBG013304 MEROPS:S01.146 EMBL:BC090827 EMBL:BC164357 UniGene:Dr.109950 ProteinModelPortal:Q5BL24 InParanoid:Q5BL24 Uniprot:Q5BL24)

HSP 1 Score: 42.743 bits (99), Expect = 1.781e-4
Identity = 18/65 (27.69%), Postives = 33/65 (50.77%), Query Frame = 0 
Query:   11 DIEKTVIHEGFDKTTGVNDIALLKTVGKFTFTDLVLSLCMNIDRSIIHQGANGTISGITNEERKV 75
            ++ K ++H  ++  T  NDIALL+     TF D +  +C+    S+   G +  I+G  + +  V
Sbjct:  106 NVAKIIVHSSYNSNTNDNDIALLRLSSAVTFNDYIRPVCLAAQNSVYSAGTSSWITGWGDVQAGV 170
[Close]
BLAST of EMLSAG00000002306 vs. GO
Match: - (symbol:zgc:112038 "zgc:112038" species:7955 "Danio rerio" [GO:0003824 "catalytic activity" evidence=IEA] [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0005575 "cellular_component" evidence=ND] [GO:0008233 "peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008236 "serine-type peptidase activity" evidence=IEA] InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR009003 InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS50240 SMART:SM00020 ZFIN:ZDB-GENE-050522-271 GO:GO:0006508 GO:GO:0004252 SUPFAM:SSF50494 eggNOG:COG5640 HOVERGEN:HBG013304 HOGENOM:HOG000251820 MEROPS:S01.146 EMBL:BC095652 EMBL:BC164334 RefSeq:NP_001018482.1 UniGene:Dr.91042 ProteinModelPortal:Q502L4 GeneID:553673 KEGG:dre:553673 InParanoid:Q502L4 NextBio:20880405 Uniprot:Q502L4)

HSP 1 Score: 42.3578 bits (98), Expect = 2.132e-4
Identity = 26/71 (36.62%), Postives = 37/71 (52.11%), Query Frame = 0 
Query:   12 IEKTVIHEGFDKTTGVNDIALLKTVGKFTFTDLVLSLCMNIDRSIIHQGANGTISGITNEERKVLRDDRVT 82
            + + VIH  +  TT  NDIALL+     TFTD +  +C+    S+    A GT S IT  ++    D +VT
Sbjct:  108 LTQIVIHPDYSTTTQNNDIALLRLSSSVTFTDYIRPVCLASADSVF---AGGTKSWITGWDKHRSSDIQVT 175
[Close]
BLAST of EMLSAG00000002306 vs. GO
Match: - (symbol:TMPRSS2 "Transmembrane protease serine 2" species:9606 "Homo sapiens" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0005044 "scavenger receptor activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA] InterPro:IPR001190 InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR002172 InterPro:IPR009003 InterPro:IPR017448 InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS50068 PROSITE:PS50240 PROSITE:PS50287 SMART:SM00020 SMART:SM00192 SMART:SM00202 GO:GO:0005886 GO:GO:0005737 GO:GO:0006508 GO:GO:0004252 GO:GO:0005044 GO:GO:0006898 SUPFAM:SSF50494 Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209 SUPFAM:SSF56487 HOGENOM:HOG000251822 EMBL:AP001610 HGNC:HGNC:11876 ChiTaRS:TMPRSS2 ProteinModelPortal:C9JKZ3 SMR:C9JKZ3 Ensembl:ENST00000454499 NextBio:35486879 ArrayExpress:C9JKZ3 Bgee:C9JKZ3 Uniprot:C9JKZ3)

HSP 1 Score: 41.9726 bits (97), Expect = 4.496e-4
Identity = 31/101 (30.69%), Postives = 44/101 (43.56%), Query Frame = 0 
Query:   12 IEKTVIHEGFDKTTGVNDIALLKTVGKFTFTDLVLSLCMNIDRSIIHQGANGTISGITNEERK-----VLRDDRVTIIQTSYKVCRH-------PGVFCTG 100
            +EK + H  +D  T  NDIAL+K     TF DLV  +C+     ++       ISG    E K     VL   +V +I+T     R+       P + C G
Sbjct:  328 VEKVISHPNYDSKTKNNDIALMKLQKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAG 428
[Close]
BLAST of EMLSAG00000002306 vs. GO
Match: - (symbol:TMPRSS2 "Transmembrane protease serine 2" species:9606 "Homo sapiens" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0005044 "scavenger receptor activity" evidence=IEA] [GO:0005887 "integral component of plasma membrane" evidence=TAS] [GO:0008236 "serine-type peptidase activity" evidence=TAS] [GO:0070062 "extracellular vesicular exosome" evidence=IDA] InterPro:IPR001190 InterPro:IPR001254 InterPro:IPR001314 InterPro:IPR002172 InterPro:IPR009003 InterPro:IPR017448 InterPro:IPR018114 Pfam:PF00089 PRINTS:PR00722 PROSITE:PS00134 PROSITE:PS00135 PROSITE:PS50068 PROSITE:PS50240 PROSITE:PS50287 SMART:SM00020 SMART:SM00192 SMART:SM00202 GO:GO:0005737 GO:GO:0070062 GO:GO:0005887 GO:GO:0006508 EMBL:CH471079 GO:GO:0004252 GO:GO:0008236 GO:GO:0005044 GO:GO:0006898 SUPFAM:SSF50494 eggNOG:COG5640 HOVERGEN:HBG013304 OrthoDB:EOG75B84T Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209 SUPFAM:SSF56487 TreeFam:TF351678 EMBL:AP001610 EMBL:U75329 EMBL:AF123453 EMBL:AF270487 EMBL:AK291813 EMBL:AK296860 EMBL:AK313338 EMBL:AK222784 EMBL:BC051839 RefSeq:NP_001128571.1 RefSeq:NP_005647.3 RefSeq:XP_005261098.1 UniGene:Hs.439309 ProteinModelPortal:O15393 SMR:O15393 STRING:9606.ENSP00000330330 BindingDB:O15393 ChEMBL:CHEMBL1795140 MEROPS:S01.247 PhosphoSite:O15393 PaxDb:O15393 PRIDE:O15393 DNASU:7113 Ensembl:ENST00000332149 Ensembl:ENST00000398585 Ensembl:ENST00000458356 GeneID:7113 KEGG:hsa:7113 UCSC:uc002yzj.3 CTD:7113 GeneCards:GC21M042836 HGNC:HGNC:11876 HPA:HPA013182 MIM:602060 neXtProt:NX_O15393 PharmGKB:PA36577 KO:K09633 OMA:KSWHPVC PhylomeDB:O15393 ChiTaRS:TMPRSS2 GeneWiki:TMPRSS2 GenomeRNAi:7113 NextBio:27847 PRO:PR:O15393 ArrayExpress:O15393 Bgee:O15393 CleanEx:HS_TMPRSS2 Genevestigator:O15393 Uniprot:O15393)

HSP 1 Score: 41.9726 bits (97), Expect = 4.505e-4
Identity = 31/101 (30.69%), Postives = 44/101 (43.56%), Query Frame = 0 
Query:   12 IEKTVIHEGFDKTTGVNDIALLKTVGKFTFTDLVLSLCMNIDRSIIHQGANGTISGITNEERK-----VLRDDRVTIIQTSYKVCRH-------PGVFCTG 100
            +EK + H  +D  T  NDIAL+K     TF DLV  +C+     ++       ISG    E K     VL   +V +I+T     R+       P + C G
Sbjct:  328 VEKVISHPNYDSKTKNNDIALMKLQKPLTFNDLVKPVCLPNPGMMLQPEQLCWISGWGATEEKGKTSEVLNAAKVLLIETQRCNSRYVYDNLITPAMICAG 428
[Close]
BLAST of EMLSAG00000002306 vs. C. finmarchicus
Match: gi|592956034|gb|GAXK01002522.1| (TSA: Calanus finmarchicus comp90626_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 45.0542 bits (105), Expect = 1.545e-5
Identity = 27/95 (28.42%), Postives = 51/95 (53.68%), Query Frame = 0 
Query:    2 IEQSKIQILDIEKTVIHEGFDKTTGVNDIALLKTVGKFTFTDLVLSLCMNIDRSIIHQGANGTIS--GITNEERK---VLRDDRVTIIQTSYKVC 91
            IE  + Q + +E  +    +D+ T  NDIA+LK   +  F + V+  C+  D++ ++ G    +S  G T+E+ K   VL++ + TI+  + + C
Sbjct:  580 IETQRAQGISVESVITRPDYDEDTMDNDIAILKLSEEVQFNENVVPACLPTDKNKMYTGWEAVVSGWGTTSEQGKLSDVLKETKQTILANTDEDC 864
[Close]
BLAST of EMLSAG00000002306 vs. C. finmarchicus
Match: gi|592931436|gb|GAXK01027117.1| (TSA: Calanus finmarchicus comp18562_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 44.669 bits (104), Expect = 1.663e-5
Identity = 27/95 (28.42%), Postives = 48/95 (50.53%), Query Frame = 0 
Query:    2 IEQSKIQILDIEKTVIHEGFDKTTGVNDIALLKTVGKFTFTDLVLSLCMNIDRSIIHQGANGTIS--GITNE---ERKVLRDDRVTIIQTSYKVC 91
            IE  K+Q + +E+ +    +D T+  NDIALL+      F + V+  C+  DR+  +      +S  G T+E      VL++   TI+ ++  +C
Sbjct:  421 IENEKVQGIQVERVIKRPDYDTTSINNDIALLRLASDVEFNNNVIPACLPTDRTQQYTDYEAVVSGWGTTSEGGSTSSVLKETTQTILSSTDPIC 705
[Close]
BLAST of EMLSAG00000002306 vs. C. finmarchicus
Match: gi|592931437|gb|GAXK01027116.1| (TSA: Calanus finmarchicus comp18562_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 44.2838 bits (103), Expect = 2.247e-5
Identity = 27/95 (28.42%), Postives = 48/95 (50.53%), Query Frame = 0 
Query:    2 IEQSKIQILDIEKTVIHEGFDKTTGVNDIALLKTVGKFTFTDLVLSLCMNIDRSIIHQGANGTIS--GITNE---ERKVLRDDRVTIIQTSYKVC 91
            IE  K+Q + +E+ +    +D T+  NDIALL+      F + V+  C+  DR+  +      +S  G T+E      VL++   TI+ ++  +C
Sbjct:  437 IENEKVQGIQVERVIKRPDYDTTSINNDIALLRLASDVEFNNNVIPACLPTDRTQQYTDYEAVVSGWGTTSEGGSTSSVLKETTQTILSSTDPIC 721
[Close]
BLAST of EMLSAG00000002306 vs. C. finmarchicus
Match: gi|592902790|gb|GAXK01055585.1| (TSA: Calanus finmarchicus comp2065017_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 36.5798 bits (83), Expect = 5.668e-3
Identity = 17/48 (35.42%), Postives = 27/48 (56.25%), Query Frame = 0 
Query:    8 QILDIEKTVIHEGFDKTTGV-NDIALLKTVGKFTFTDLVLSLCMNIDR 54
            Q + +E+ V+H+ F K + + NDIAL+K        D V  +C+  DR
Sbjct:  468 QDIKVEEVVLHQSFGKPSTLQNDIALIKLENSVVLNDFVTPICLPFDR 611
[Close]
BLAST of EMLSAG00000002306 vs. C. finmarchicus
Match: gi|592953403|gb|GAXK01005150.1| (TSA: Calanus finmarchicus comp1528670_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 36.965 bits (84), Expect = 5.681e-3
Identity = 16/48 (33.33%), Postives = 25/48 (52.08%), Query Frame = 0 
Query:    3 EQSKIQILDIEKTVIHEGFDKTTGVNDIALLKTVGKFTFTDLVLSLCM 50
            +  K+Q   + + +IH G+DKT   NDIAL+K   +      V   C+
Sbjct:  661 DNPKVQKRGVSEVIIHSGYDKTKNTNDIALIKMTREVMLNRFVQLACL 804
[Close]
BLAST of EMLSAG00000002306 vs. C. finmarchicus
Match: gi|592844682|gb|GAXK01112862.1| (TSA: Calanus finmarchicus comp2688059_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 36.5798 bits (83), Expect = 7.239e-3
Identity = 28/97 (28.87%), Postives = 48/97 (49.48%), Query Frame = 0 
Query:    8 QILDIEKTVIHEGFDKTTG-----VNDIALLKTVGKFTFTDLVLSLCM-----NIDRSIIHQGANGTIS-GITNEERKVLRDDRVTIIQTSYKVCRH 93
            Q L ++K +IH GFD   G     +NDIAL++T   F+ +  V ++C+     N D S+      G    G   E + +L++  + +I   +K C+ 
Sbjct:  173 QELAVQKIIIHPGFDAIRGRSGNLLNDIALVQTSQPFSLSPHVDTICLPRPEQNFDGSLCAATGWGKDRFGDAGELQVILKEVWMNVID--HKSCQE 457
[Close]
BLAST of EMLSAG00000002306 vs. C. finmarchicus
Match: gi|592887976|gb|GAXK01070399.1| (TSA: Calanus finmarchicus comp214836_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 36.1946 bits (82), Expect = 9.931e-3
Identity = 22/62 (35.48%), Postives = 29/62 (46.77%), Query Frame = 0 
Query:    8 QILDIEKTVIHEGFDKTTGVNDIALLKTVGKFTFTDLVL-SLCMNIDRSIIHQGANG-TISG 67
            Q LDI + +IH  +D     NDIAL+K  GKF     +L   C        + G    T+SG
Sbjct:  478 QRLDISEVIIHPSYDSKLFTNDIALIKVDGKFNCKKRILYPACFPSKNQYSYTGWGATTVSG 663
[Close]
BLAST of EMLSAG00000002306 vs. C. finmarchicus
Match: gi|592887977|gb|GAXK01070398.1| (TSA: Calanus finmarchicus comp214836_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 36.1946 bits (82), Expect = 1.061e-2
Identity = 17/39 (43.59%), Postives = 22/39 (56.41%), Query Frame = 0 
Query:    8 QILDIEKTVIHEGFDKTTGVNDIALLKTVGKFTFTDLVL 46
            Q LDI + +IH  +D     NDIAL+K  GKF     +L
Sbjct:  809 QRLDISEVIIHPSYDSKLFTNDIALIKVDGKFNCKKRIL 925
[Close]
BLAST of EMLSAG00000002306 vs. C. finmarchicus
Match: gi|592844681|gb|GAXK01112863.1| (TSA: Calanus finmarchicus comp2688059_c0_seq4 transcribed RNA sequence)

HSP 1 Score: 35.4242 bits (80), Expect = 1.451e-2
Identity = 21/61 (34.43%), Postives = 28/61 (45.90%), Query Frame = 0 
Query:    3 EQSKIQILDIEKTVIHEGFDKTTGV-----NDIALLKTVGKFTFTDLVLSLCMNIDRSIIH 58
            E    Q L +E+ V H GFD   G      NDIAL+KT   F+    V ++C+       H
Sbjct:  290 ELYAYQELKVERIVFHPGFDIEKGARGNLWNDIALVKTDKPFSLAPHVDTICLPRPGQAFH 472
[Close]
BLAST of EMLSAG00000002306 vs. C. finmarchicus
Match: gi|592844683|gb|GAXK01112861.1| (TSA: Calanus finmarchicus comp2688059_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 35.039 bits (79), Expect = 2.508e-2
Identity = 19/48 (39.58%), Postives = 26/48 (54.17%), Query Frame = 0 
Query:    8 QILDIEKTVIHEGFDKTTGV-----NDIALLKTVGKFTFTDLVLSLCM 50
            Q L +E+ V H GFD   G      NDIAL+KT   F+    V ++C+
Sbjct:  442 QELKVERIVFHPGFDIEKGARGNLWNDIALVKTDKPFSLAPHVDTICL 585
[Close]
BLAST of EMLSAG00000002306 vs. L. salmonis peptides
Match: EMLSAP00000002306 (pep:novel supercontig:LSalAtl2s:LSalAtl2s14360:3:399:-1 gene:EMLSAG00000002306 transcript:EMLSAT00000002306 description:"maker-LSalAtl2s14360-augustus-gene-0.0")

HSP 1 Score: 225.328 bits (573), Expect = 4.831e-77
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 
Query:    1 MIEQSKIQILDIEKTVIHEGFDKTTGVNDIALLKTVGKFTFTDLVLSLCMNIDRSIIHQGANGTISGITNEERKVLRDDRVTIIQTSYKVCRHPGVFCTGPNTGLKSMAS 110
            MIEQSKIQILDIEKTVIHEGFDKTTGVNDIALLKTVGKFTFTDLVLSLCMNIDRSIIHQGANGTISGITNEERKVLRDDRVTIIQTSYKVCRHPGVFCTGPNTGLKSMAS
Sbjct:    1 MIEQSKIQILDIEKTVIHEGFDKTTGVNDIALLKTVGKFTFTDLVLSLCMNIDRSIIHQGANGTISGITNEERKVLRDDRVTIIQTSYKVCRHPGVFCTGPNTGLKSMAS 110
[Close]
BLAST of EMLSAG00000002306 vs. L. salmonis peptides
Match: EMLSAP00000009325 (pep:novel supercontig:LSalAtl2s:LSalAtl2s595:738044:740181:-1 gene:EMLSAG00000009325 transcript:EMLSAT00000009325 description:"maker-LSalAtl2s595-augustus-gene-7.5")

HSP 1 Score: 119.398 bits (298), Expect = 1.048e-34
Identity = 57/64 (89.06%), Postives = 60/64 (93.75%), Query Frame = 0 
Query:    1 MIEQSKIQILDIEKTVIHEGFDKTTGVNDIALLKTVGKFTFTDLVLSLCMNIDRSIIHQGANGT 64
            MIEQS IQILD+EKTVIHEGFD+TTGVNDIAL+KTVGKF FTDLVL LCMNIDRSII QGANGT
Sbjct:  111 MIEQSDIQILDVEKTVIHEGFDETTGVNDIALIKTVGKFAFTDLVLPLCMNIDRSIIQQGANGT 174
[Close]
BLAST of EMLSAG00000002306 vs. L. salmonis peptides
Match: EMLSAP00000001992 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1357:15483:16755:-1 gene:EMLSAG00000001992 transcript:EMLSAT00000001992 description:"maker-LSalAtl2s1357-snap-gene-0.15")

HSP 1 Score: 89.7373 bits (221), Expect = 8.302e-23
Identity = 47/105 (44.76%), Postives = 69/105 (65.71%), Query Frame = 0 
Query:    7 IQILDIEKTVIHEGFDKTTGVNDIALLKTVGKFTFTDLVLSLCMNIDRSIIHQGANGTISGITNEER-KVLRDDRVTIIQTSYKVCRHPGVFCTGPNTGLKSMAS 110
            +QIL+IEK   HE ++  +  NDIAL+KT  KF F+DLVL +C+N+D+S I  GA GT+SGI  +    +L+   VTI  +    C +PGVFCT  +T ++++ S
Sbjct:  158 VQILNIEKITKHEDYNDWSIRNDIALVKTKSKFIFSDLVLPICLNVDKSKIKFGATGTVSGIKGDNMDYLLKSGGVTIYDSIEGRCSYPGVFCTKHSTYIETLYS 262
[Close]
BLAST of EMLSAG00000002306 vs. L. salmonis peptides
Match: EMLSAP00000007986 (pep:novel supercontig:LSalAtl2s:LSalAtl2s4743:658:1503:-1 gene:EMLSAG00000007986 transcript:EMLSAT00000007986 description:"augustus-LSalAtl2s4743-processed-gene-0.0")

HSP 1 Score: 47.3654 bits (111), Expect = 6.957e-8
Identity = 31/102 (30.39%), Postives = 53/102 (51.96%), Query Frame = 0 
Query:    8 QILDIEKTVIHEGFDKTTGVNDIALLKTVGKFTFTDLVLSLCMNIDRSIIHQGANGTISG--ITNEERKVLRDDRVTIIQT--SY--KVCRHPGVFCTGPNT 103
            Q + I+K + HE ++ TT  N+IA++       + D VL +C + D   + +G   T +G  I   + K+ R    +I++T   Y  KVC++ G  CT  N+
Sbjct:  101 QAVSIQKYIQHENYNMTTRENNIAIIFLNNNLVWNDKVLPICFSSDNFPVEEGKKATFTGSNIVQNDYKISR-IHYSIVKTLPDYVDKVCKNEGFLCTTRNS 201
The following BLAST results are available for this feature:
BLAST of EMLSAG00000002306 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 6
Match NameE-valueIdentityDescription
-7.501e-532.22symbol:CG33225 species:7227 "Drosophila melanogast... [more]
-1.158e-426.47symbol:zgc:153968 "zgc:153968" species:7955 "Danio... [more]
-1.781e-427.69symbol:zgc:101788 "zgc:101788" species:7955 "Danio... [more]
-2.132e-436.62symbol:zgc:112038 "zgc:112038" species:7955 "Danio... [more]
-4.496e-430.69symbol:TMPRSS2 "Transmembrane protease serine 2" s... [more]
-4.505e-430.69symbol:TMPRSS2 "Transmembrane protease serine 2" s... [more]
back to top
BLAST of EMLSAG00000002306 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592956034|gb|GAXK01002522.1|1.545e-528.42TSA: Calanus finmarchicus comp90626_c1_seq1 transc... [more]
gi|592931436|gb|GAXK01027117.1|1.663e-528.42TSA: Calanus finmarchicus comp18562_c1_seq2 transc... [more]
gi|592931437|gb|GAXK01027116.1|2.247e-528.42TSA: Calanus finmarchicus comp18562_c1_seq1 transc... [more]
gi|592902790|gb|GAXK01055585.1|5.668e-335.42TSA: Calanus finmarchicus comp2065017_c0_seq1 tran... [more]
gi|592953403|gb|GAXK01005150.1|5.681e-333.33TSA: Calanus finmarchicus comp1528670_c0_seq1 tran... [more]
gi|592844682|gb|GAXK01112862.1|7.239e-328.87TSA: Calanus finmarchicus comp2688059_c0_seq3 tran... [more]
gi|592887976|gb|GAXK01070399.1|9.931e-335.48TSA: Calanus finmarchicus comp214836_c1_seq1 trans... [more]
gi|592887977|gb|GAXK01070398.1|1.061e-243.59TSA: Calanus finmarchicus comp214836_c0_seq1 trans... [more]
gi|592844681|gb|GAXK01112863.1|1.451e-234.43TSA: Calanus finmarchicus comp2688059_c0_seq4 tran... [more]
gi|592844683|gb|GAXK01112861.1|2.508e-239.58TSA: Calanus finmarchicus comp2688059_c0_seq2 tran... [more]

Pages

back to top
BLAST of EMLSAG00000002306 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 4
Match NameE-valueIdentityDescription
EMLSAP000000023064.831e-77100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s14360:3:3... [more]
EMLSAP000000093251.048e-3489.06pep:novel supercontig:LSalAtl2s:LSalAtl2s595:73804... [more]
EMLSAP000000019928.302e-2344.76pep:novel supercontig:LSalAtl2s:LSalAtl2s1357:1548... [more]
EMLSAP000000079866.957e-830.39pep:novel supercontig:LSalAtl2s:LSalAtl2s4743:658:... [more]
back to top
BLAST of EMLSAG00000002306 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000002306 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000002306 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000002306 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s14360supercontigLSalAtl2s14360:3..399 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s14360-augustus-gene-0.0
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000002306 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000002306EMLSAT00000002306-698153Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s14360:3..399-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000002306-685072 ID=EMLSAG00000002306-685072|Name=EMLSAG00000002306|organism=Lepeophtheirus salmonis|type=gene|length=397bp|location=Sequence derived from alignment at LSalAtl2s14360:3..399- (Lepeophtheirus salmonis)
ATGATAGAACAGTCTAAAATTCAGATATTGGATATTGAAAAAACTGTGAT
TCATGAAGGGTTTGATAAGACAACAGGAGTAAATGACATTGCCTTACTAA
AAACTGTAGGCAAATTCACGTTTACTGATTTGGTTCTTTCATTATGTATG
AATATAGACCGATCAATAATTCACCAGGGAGCGAATGGAACAAGTAACAT
TTTTGTGAAATAATAAAGTAAAATTAACGTATTCATTTTTTTATTGAAAT
GTGTATATAGTAAGCGGGATTACTAATGAAGAGAGAAAGGTATTACGAGA
TGATAGAGTGACGATTATCCAAACWAGTTATAAAGTTTGTAGGCATCCWG
GAGTGTTTTGTACKGGTCCAAATACTGGCCTTAAGTCAATGGCTTCT
back to top
Add to Basket