EMLSAG00000006627, EMLSAG00000006627-689393 (gene) Lepeophtheirus salmonis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000006627 vs. GO
Match: - (symbol:snRNP-U1-70K "small ribonucleoprotein particle U1 subunit 70K" species:7227 "Drosophila melanogaster" [GO:0030532 "small nuclear ribonucleoprotein complex" evidence=ISS] [GO:0005692 "U11 snRNP" evidence=ISS] [GO:0030619 "U1 snRNA binding" evidence=NAS] [GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS;NAS] [GO:0003729 "mRNA binding" evidence=ISS;IDA] [GO:0005685 "U1 snRNP" evidence=ISS] [GO:0048025 "negative regulation of mRNA splicing, via spliceosome" evidence=IPI] [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0005515 "protein binding" evidence=IPI] [GO:0007052 "mitotic spindle organization" evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2 spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:AE014134 GO:GO:0007052 GO:GO:0022008 GO:GO:0016607 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003729 GO:GO:0048025 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 eggNOG:COG0724 GO:GO:0000381 GO:GO:0005685 KO:K11093 InterPro:IPR022023 Pfam:PF12220 GeneTree:ENSGT00530000063750 OrthoDB:EOG79W96V OMA:RHDKYDR EMBL:M31162 EMBL:AY061501 EMBL:AY089622 PIR:A36311 RefSeq:NP_001260172.1 RefSeq:NP_001260173.1 RefSeq:NP_477205.1 UniGene:Dm.4728 PDB:2BN5 PDBsum:2BN5 ProteinModelPortal:P17133 SMR:P17133 BioGrid:60131 DIP:DIP-19840N MINT:MINT-1583111 PaxDb:P17133 PRIDE:P17133 EnsemblMetazoa:FBtr0079355 EnsemblMetazoa:FBtr0331374 EnsemblMetazoa:FBtr0331375 GeneID:33982 KEGG:dme:Dmel_CG8749 CTD:33982 FlyBase:FBgn0016978 InParanoid:P17133 PhylomeDB:P17133 EvolutionaryTrace:P17133 GenomeRNAi:33982 NextBio:786261 PRO:PR:P17133 Bgee:P17133 Uniprot:P17133) HSP 1 Score: 261.922 bits (668), Expect = 2.635e-81 Identity = 157/212 (74.06%), Postives = 180/212 (84.91%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSED-KPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSG 211
MTQ+ PPNLLALFA REPIP++PP DKLPHEKK + Y G+ FM FE+P+DTP P VE R+ER+ER++REKAEQVAYKLE+EIA+WDP ++ +T DP++TLFI RINY TSESKLRREFE YG IK IVL D E KP+G+AFIEYEHERDMH+AYKHADGKKID +RVLVDVERARTVKGWLPRRLGGGLGGTRRGG +VNI HSG
Sbjct: 1 MTQYLPPNLLALFAAREPIPFMPPVDKLPHEKK-SRGYLGVAKFMADFEDPKDTPLPKTVETRQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERARTVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
BLAST of EMLSAG00000006627 vs. GO
Match: - (symbol:snrnp70 "U1 small nuclear ribonucleoprotein 70 kDa" species:8355 "Xenopus laevis" [GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0005685 "U1 snRNP" evidence=ISS] [GO:0043484 "regulation of RNA splicing" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0016607 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723 GO:GO:0043484 GO:GO:0000398 GO:GO:0005685 InterPro:IPR022023 Pfam:PF12220 EMBL:X12430 PIR:S02016 UniGene:Xl.5366 ProteinModelPortal:P09406 Xenbase:XB-GENE-992825 HOVERGEN:HBG012300 Uniprot:P09406) HSP 1 Score: 243.047 bits (619), Expect = 1.046e-73 Identity = 152/218 (69.72%), Postives = 173/218 (79.36%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIK--MIVLPKDSED--KPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSGRED 214
MTQF PPNLLALFAPR+P+PYLPP DKLPHEK Y GI ++ FE+P D P PTR E REER+ERK+REK E+ +E E+ +WDPH+ + + GD +KTLF+ R+NY T+ESKLRREFE YG IK IV K SE KPRG+AFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER RTVKGW PRRLGGGLGGTRRGG +VNI HSGR+D
Sbjct: 1 MTQFLPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRAETREERMERKRREKIERRQQDVENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHIVYNKGSEGSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDD 218
BLAST of EMLSAG00000006627 vs. GO
Match: - (symbol:snrnp70 "U1 small nuclear ribonucleoprotein 70 kDa" species:8364 "Xenopus (Silurana) tropicalis" [GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0005685 "U1 snRNP" evidence=ISS] [GO:0043484 "regulation of RNA splicing" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0016607 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723 GO:GO:0060218 GO:GO:0043484 GO:GO:0000398 eggNOG:COG0724 GO:GO:0005685 KO:K11093 InterPro:IPR022023 Pfam:PF12220 CTD:6625 GeneTree:ENSGT00530000063750 OrthoDB:EOG79W96V TreeFam:TF314215 HOVERGEN:HBG012300 EMBL:CR760195 EMBL:BC081331 RefSeq:NP_001268699.1 UniGene:Str.26779 ProteinModelPortal:Q66II8 Ensembl:ENSXETT00000049555 GeneID:493488 KEGG:xtr:493488 Xenbase:XB-GENE-992818 InParanoid:Q66II8 OMA:REHKRGD Bgee:Q66II8 Uniprot:Q66II8) HSP 1 Score: 240.35 bits (612), Expect = 1.010e-72 Identity = 148/215 (68.84%), Postives = 171/215 (79.53%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDS-EDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSGRED 214
MTQF PPNLLALFAPR+P+PYLPP DKLPHEK Y GI ++ FE+P D P PTR E REER+ERK+REK E+ +E E+ +WDPH+ + + GD +KTLF+ R+NY T+ESKLRREFE YG IK I + + KPRG+AFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER RTVKGW PRRLGGGLGGTRRGG +VNI HSGR+D
Sbjct: 1 MTQFLPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRAETREERMERKRREKIERRQQDVENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDD 215
BLAST of EMLSAG00000006627 vs. GO
Match: - (symbol:SNRNP70 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0043484 "regulation of RNA splicing" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723 GO:GO:0043484 GO:GO:0000398 KO:K11093 OMA:DGRDMYM InterPro:IPR022023 Pfam:PF12220 CTD:6625 GeneTree:ENSGT00530000063750 TreeFam:TF314215 EMBL:AAEX03000805 RefSeq:XP_005616386.1 RefSeq:XP_541503.2 ProteinModelPortal:F6V5G7 Ensembl:ENSCAFT00000005969 GeneID:484388 KEGG:cfa:484388 Uniprot:F6V5G7) HSP 1 Score: 235.343 bits (599), Expect = 4.318e-71 Identity = 151/224 (67.41%), Postives = 174/224 (77.68%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMI-VLPKDSEDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSGREDGGGARERGG 223
MTQF PPNLLALFAPR+PIPYLPP +KLPHEK Y GI ++ FE+P D P PTR E REER+ERK+REK E+ ++E E+ +WDPH+ + GD +KTLF+ R+NY T+ESKLRREFE YG IK I ++ KPRG+AFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER RTVKGW PRRLGGGLGGTRRGG +VNI HSGR+D ER G
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRAETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERPG 224
BLAST of EMLSAG00000006627 vs. GO
Match: - (symbol:SNRNP70 "U1 small nuclear ribonucleoprotein 70 kDa" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS] [GO:0003723 "RNA binding" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0005685 "U1 snRNP" evidence=IDA] [GO:0006397 "mRNA processing" evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0043484 "regulation of RNA splicing" evidence=IMP] [GO:0044822 "poly(A) RNA binding" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005654 GO:GO:0016607 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723 EMBL:CH471177 GO:GO:0043484 GO:GO:0000398 eggNOG:COG0724 GO:GO:0005685 PDB:3CW1 PDB:3PGW PDBsum:3CW1 PDBsum:3PGW KO:K11093 OMA:DGRDMYM InterPro:IPR022023 Pfam:PF12220 CTD:6625 OrthoDB:EOG79W96V TreeFam:TF314215 EMBL:X04654 EMBL:X06814 EMBL:X06815 EMBL:X06817 EMBL:X07402 EMBL:X06816 EMBL:X06812 EMBL:X06811 EMBL:X07401 EMBL:X07403 EMBL:M22636 EMBL:M57939 EMBL:M57929 EMBL:M57930 EMBL:M57932 EMBL:M57934 EMBL:M57937 EMBL:M57935 EMBL:AK096783 EMBL:X84841 EMBL:AL117507 EMBL:BC001315 PIR:A25707 PIR:S00674 RefSeq:NP_003080.2 RefSeq:XP_005259233.1 RefSeq:XP_005259234.1 UniGene:Hs.467097 PDB:2L5I PDB:2L5J PDBsum:2L5I PDBsum:2L5J ProteinModelPortal:P08621 SMR:P08621 BioGrid:112509 DIP:DIP-29406N IntAct:P08621 MINT:MINT-5004037 PhosphoSite:P08621 DMDM:13635663 PaxDb:P08621 PRIDE:P08621 Ensembl:ENST00000221448 Ensembl:ENST00000401730 Ensembl:ENST00000595231 Ensembl:ENST00000598441 Ensembl:ENST00000601065 GeneID:6625 KEGG:hsa:6625 UCSC:uc002pmk.3 GeneCards:GC19P049588 HGNC:HGNC:11150 HPA:CAB001718 HPA:HPA042050 HPA:HPA043516 MIM:180740 neXtProt:NX_P08621 PharmGKB:PA35992 InParanoid:P08621 ChiTaRS:SNRNP70 EvolutionaryTrace:P08621 GeneWiki:SnRNP70 GenomeRNAi:6625 NextBio:25805 PMAP-CutDB:P08621 PRO:PR:P08621 ArrayExpress:P08621 Bgee:P08621 Genevestigator:P08621 Uniprot:P08621) HSP 1 Score: 234.958 bits (598), Expect = 4.866e-71 Identity = 151/224 (67.41%), Postives = 174/224 (77.68%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMI-VLPKDSEDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSGREDGGGARERGG 223
MTQF PPNLLALFAPR+PIPYLPP +KLPHEK Y GI ++ FE+P D P PTR E REER+ERK+REK E+ ++E E+ +WDPH+ + GD +KTLF+ R+NY T+ESKLRREFE YG IK I ++ KPRG+AFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER RTVKGW PRRLGGGLGGTRRGG +VNI HSGR+D ER G
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRAETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERPG 224
BLAST of EMLSAG00000006627 vs. GO
Match: - (symbol:Snrnp70 "small nuclear ribonucleoprotein 70 (U1)" species:10090 "Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0005685 "U1 snRNP" evidence=ISO] [GO:0019012 "virion" evidence=IEA] [GO:0019013 "viral nucleocapsid" evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0043484 "regulation of RNA splicing" evidence=ISO] [GO:0044822 "poly(A) RNA binding" evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 MGI:MGI:98341 GO:GO:0016607 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723 GO:GO:0043484 GO:GO:0000398 eggNOG:COG0724 GO:GO:0005685 HOGENOM:HOG000236289 KO:K11093 OMA:DGRDMYM InterPro:IPR022023 Pfam:PF12220 CTD:6625 GeneTree:ENSGT00530000063750 OrthoDB:EOG79W96V TreeFam:TF314215 ChiTaRS:SNRNP70 EMBL:AK133115 EMBL:AK146729 EMBL:X15769 EMBL:X15770 EMBL:X15771 EMBL:X15772 EMBL:X15774 EMBL:X15775 EMBL:X15776 PIR:S04336 PIR:S04824 RefSeq:NP_033250.3 RefSeq:XP_006540795.1 UniGene:Mm.216386 ProteinModelPortal:Q62376 SMR:Q62376 BioGrid:203376 IntAct:Q62376 MINT:MINT-1868298 PhosphoSite:Q62376 PaxDb:Q62376 PRIDE:Q62376 Ensembl:ENSMUST00000074575 GeneID:20637 KEGG:mmu:20637 UCSC:uc009guw.1 HOVERGEN:HBG094947 InParanoid:Q62376 NextBio:299035 PRO:PR:Q62376 ArrayExpress:Q62376 Bgee:Q62376 Genevestigator:Q62376 Uniprot:Q62376) HSP 1 Score: 235.343 bits (599), Expect = 4.962e-71 Identity = 151/224 (67.41%), Postives = 174/224 (77.68%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMI-VLPKDSEDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSGREDGGGARERGG 223
MTQF PPNLLALFAPR+PIPYLPP +KLPHEK Y GI ++ FE+P D P PTR E REER+ERK+REK E+ ++E E+ +WDPH+ + GD +KTLF+ R+NY T+ESKLRREFE YG IK I ++ KPRG+AFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER RTVKGW PRRLGGGLGGTRRGG +VNI HSGR+D ER G
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRAETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERPG 224
BLAST of EMLSAG00000006627 vs. GO
Match: - (symbol:Snrnp70 "small nuclear ribonucleoprotein 70 (U1)" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome" evidence=ISO;ISS] [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal complex" evidence=ISO;ISS] [GO:0005685 "U1 snRNP" evidence=ISO] [GO:0019013 "viral nucleocapsid" evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0043484 "regulation of RNA splicing" evidence=ISO;ISS] [GO:0044822 "poly(A) RNA binding" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1307120 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723 GO:GO:0043484 GO:GO:0000398 EMBL:CH473979 eggNOG:COG0724 GO:GO:0019013 HOGENOM:HOG000236289 OMA:DGRDMYM InterPro:IPR022023 Pfam:PF12220 GeneTree:ENSGT00530000063750 OrthoDB:EOG79W96V TreeFam:TF314215 EMBL:AABR06004815 EMBL:AABR06004816 EMBL:AABR06004817 EMBL:BC167051 RefSeq:XP_006229163.1 RefSeq:XP_006229164.1 UniGene:Rn.203159 STRING:10116.ENSRNOP00000028176 Ensembl:ENSRNOT00000028176 GeneID:361574 NextBio:35565055 PRO:PR:B2RZ74 Genevestigator:B2RZ74 Uniprot:B2RZ74) HSP 1 Score: 235.343 bits (599), Expect = 5.343e-71 Identity = 151/224 (67.41%), Postives = 174/224 (77.68%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMI-VLPKDSEDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSGREDGGGARERGG 223
MTQF PPNLLALFAPR+PIPYLPP +KLPHEK Y GI ++ FE+P D P PTR E REER+ERK+REK E+ ++E E+ +WDPH+ + GD +KTLF+ R+NY T+ESKLRREFE YG IK I ++ KPRG+AFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER RTVKGW PRRLGGGLGGTRRGG +VNI HSGR+D ER G
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRAETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERPG 224
BLAST of EMLSAG00000006627 vs. GO
Match: - (symbol:SNRNP70 "U1 small nuclear ribonucleoprotein 70 kDa" species:9913 "Bos taurus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0005685 "U1 snRNP" evidence=ISS] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0043484 "regulation of RNA splicing" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0016607 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723 GO:GO:0043484 GO:GO:0000398 eggNOG:COG0724 GO:GO:0005685 HOGENOM:HOG000236289 KO:K11093 OMA:DGRDMYM InterPro:IPR022023 Pfam:PF12220 EMBL:BC114762 RefSeq:NP_001069514.1 UniGene:Bt.12748 ProteinModelPortal:Q1RMR2 STRING:9913.ENSBTAP00000002587 PRIDE:Q1RMR2 Ensembl:ENSBTAT00000002587 GeneID:535113 KEGG:bta:535113 CTD:6625 GeneTree:ENSGT00530000063750 InParanoid:Q1RMR2 OrthoDB:EOG79W96V TreeFam:TF314215 NextBio:20876626 Uniprot:Q1RMR2) HSP 1 Score: 234.958 bits (598), Expect = 6.257e-71 Identity = 151/224 (67.41%), Postives = 174/224 (77.68%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMI-VLPKDSEDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSGREDGGGARERGG 223
MTQF PPNLLALFAPR+PIPYLPP +KLPHEK Y GI ++ FE+P D P PTR E REER+ERK+REK E+ ++E E+ +WDPH+ + GD +KTLF+ R+NY T+ESKLRREFE YG IK I ++ KPRG+AFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER RTVKGW PRRLGGGLGGTRRGG +VNI HSGR+D ER G
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRAETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERPG 224
BLAST of EMLSAG00000006627 vs. GO
Match: - (symbol:SNRNP70 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0043484 "regulation of RNA splicing" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723 GO:GO:0043484 GO:GO:0000398 KO:K11093 OMA:DGRDMYM InterPro:IPR022023 Pfam:PF12220 GeneTree:ENSGT00530000063750 OrthoDB:EOG79W96V TreeFam:TF314215 EMBL:FP102974 RefSeq:XP_005664762.1 RefSeq:XP_005664763.1 Ensembl:ENSSSCT00000022304 GeneID:100628160 Uniprot:I3LNE5) HSP 1 Score: 234.958 bits (598), Expect = 6.351e-71 Identity = 151/224 (67.41%), Postives = 174/224 (77.68%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMI-VLPKDSEDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSGREDGGGARERGG 223
MTQF PPNLLALFAPR+PIPYLPP +KLPHEK Y GI ++ FE+P D P PTR E REER+ERK+REK E+ ++E E+ +WDPH+ + GD +KTLF+ R+NY T+ESKLRREFE YG IK I ++ KPRG+AFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER RTVKGW PRRLGGGLGGTRRGG +VNI HSGR+D ER G
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRAETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERPG 224
BLAST of EMLSAG00000006627 vs. GO
Match: - (symbol:rnp-7 species:6239 "Caenorhabditis elegans" [GO:0002119 "nematode larval development" evidence=IMP] [GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia development" evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724 EMBL:FO080149 HOGENOM:HOG000236289 KO:K11093 InterPro:IPR022023 Pfam:PF12220 GeneTree:ENSGT00530000063750 PIR:G88499 RefSeq:NP_498565.2 UniGene:Cel.4944 ProteinModelPortal:Q09584 SMR:Q09584 DIP:DIP-25425N IntAct:Q09584 MINT:MINT-229501 STRING:6239.K04G7.10 PaxDb:Q09584 EnsemblMetazoa:K04G7.10.1 EnsemblMetazoa:K04G7.10.2 GeneID:176002 KEGG:cel:CELE_K04G7.10 UCSC:K04G7.10 CTD:176002 WormBase:K04G7.10 InParanoid:Q09584 OMA:QDLLVDK NextBio:890690 PRO:PR:Q09584 Uniprot:Q09584) HSP 1 Score: 230.335 bits (586), Expect = 1.587e-70 Identity = 126/248 (50.81%), Postives = 162/248 (65.32%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHN-YEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSEDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSGREDGGGARERGGRERRSKSRERRSRSRDRRRDRRRS 247
MT F PPNLLALF R P+ YLPP L +K G+ ++ FE+P+DTPA V + E E K+R+K E +AYK+EQ IA W+P +++ DPY+TLF+GRINY TSESKLRREFE+YG IK + + D KPRG+AFIEY + +MH+AYK ADG K+DG+R++VD ER RT K WLPRRLGGG G TR+ +++ RE G GG E R + RS SRDRR+D R+
Sbjct: 1 MTAFLPPNLLALFEARPPVQYLPPCQDLLVDKNAKRAPMTGVAQYIQLFEDPKDTPAKIPVVTKAEAKEEKRRQKDELLAYKVEQGIATWNPAENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKADGIKVDGKRLVVDYERGRTQKTWLPRRLGGGKGDTRKTREAKSVIEE-REIASGF--GGGYEDRDRE---RSGSRDRRQDSYRN 242
BLAST of EMLSAG00000006627 vs. C. finmarchicus
Match: gi|592822337|gb|GAXK01132231.1| (TSA: Calanus finmarchicus comp27302_c0_seq1 transcribed RNA sequence) HSP 1 Score: 259.61 bits (662), Expect = 7.287e-81 Identity = 138/185 (74.59%), Postives = 162/185 (87.57%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTXXXXXXXXXXXXXXXXXXQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSED-KPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVK 184
MTQF PPNLLALFAPR+PIPYLPP DKLPHEKK+THNY+GI ++ FE+P DTPAP VE REER ER+KREKAEQVAYKLEQEIA+WDP++++ + GDP+KTLF R+N+YTSESKLRREFE YG +K I + ++++ KPRG+AFIEYEHE+DMHSAYKHADGKKIDGRRVLVDVER RTVK
Sbjct: 34 MTQFLPPNLLALFAPRDPIPYLPPVDKLPHEKKITHNYQGIANYVHLFEDPVDTPAPVGVETREERRERRKREKAEQVAYKLEQEIALWDPNAIDSTMGDPFKTLFTARVNFYTSESKLRREFEQYGPVKSIKMVHNTKNGKPRGYAFIEYEHEKDMHSAYKHADGKKIDGRRVLVDVERGRTVK 588
BLAST of EMLSAG00000006627 vs. C. finmarchicus
Match: gi|592823093|gb|GAXK01131475.1| (TSA: Calanus finmarchicus comp8986956_c0_seq1 transcribed RNA sequence) HSP 1 Score: 60.077 bits (144), Expect = 3.707e-10 Identity = 29/78 (37.18%), Postives = 47/78 (60.26%), Query Frame = 0
Query: 103 KTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSE-DKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
K L++G ++Y T+E +R F+ +G I + LP+D + RGF F+ Y+ ERD A + DG + +GRR+ V+ R
Sbjct: 39 KKLYLGNLSYRTTEDSVRSHFDKWGKITDVHLPRDRQTGDSRGFGFVTYDDERDAEDAIRAMDGVEFEGRRLKVNKAR 272
BLAST of EMLSAG00000006627 vs. C. finmarchicus
Match: gi|592927219|gb|GAXK01031247.1| (TSA: Calanus finmarchicus comp20064_c0_seq1 transcribed RNA sequence) HSP 1 Score: 51.9878 bits (123), Expect = 4.180e-7 Identity = 26/74 (35.14%), Postives = 44/74 (59.46%), Query Frame = 0
Query: 104 TLFIGRINYYTSESKLRREFESYGVIKMIVLPKDS-EDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 176
TL+IG +++YT+E +L F G +K IV+ D + P GF F+EY + D +A ++ +G ++D R + D
Sbjct: 203 TLYIGNMSFYTTEEQLYELFGKCGDVKRIVMGLDKFKRTPCGFCFVEYYNREDGEAALRYINGTRLDDRIIRTD 424
BLAST of EMLSAG00000006627 vs. C. finmarchicus
Match: gi|592785880|gb|GAXK01168688.1| (TSA: Calanus finmarchicus comp446_c0_seq1 transcribed RNA sequence) HSP 1 Score: 53.1434 bits (126), Expect = 4.348e-7 Identity = 26/80 (32.50%), Postives = 46/80 (57.50%), Query Frame = 0
Query: 100 DPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSED-KPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVE 178
D +L +G I Y T + L+ FE +G + + +P D E +PRGFAF+ + +++D A +G++ DGR + V ++
Sbjct: 82 DRMTSLRVGNIPYKTHQEDLKEVFEKFGDVGDVFIPTDRESGRPRGFAFVRFYNKKDAEDAMDELNGREFDGRDLRVSID 321
BLAST of EMLSAG00000006627 vs. C. finmarchicus
Match: gi|592926691|gb|GAXK01031760.1| (TSA: Calanus finmarchicus comp20483_c0_seq1 transcribed RNA sequence) HSP 1 Score: 51.2174 bits (121), Expect = 6.423e-7 Identity = 29/77 (37.66%), Postives = 45/77 (58.44%), Query Frame = 0
Query: 101 PYKTLFIGRINYYTSESKLRREFESYGVI-KMIVLPKDSEDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 176
P K + I ++ YTSE +L +EF+ +G + K+ V+ + RGFAFI YE+ D A G ++DGR++ VD
Sbjct: 222 PSKCIGIFGLSLYTSERELEQEFKKFGPMEKVQVVLDGHSGRSRGFAFIYYENVEDATEARNAMSGAEMDGRKIRVD 452
BLAST of EMLSAG00000006627 vs. C. finmarchicus
Match: gi|592766767|gb|GAXK01187801.1| (TSA: Calanus finmarchicus comp10812_c0_seq1 transcribed RNA sequence) HSP 1 Score: 51.6026 bits (122), Expect = 1.995e-6 Identity = 31/97 (31.96%), Postives = 55/97 (56.70%), Query Frame = 0
Query: 83 EQEIAVWDPHSV--EKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSE-DKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 176
++ +A+ DP+++ +KS +++F+G I Y +E KL+ F G + L D E KP+G+ F EY+ + SA ++ +G +I GR + VD
Sbjct: 21 QKVVAMNDPNNMIMDKS----MRSVFVGNIPYEATEEKLKDIFSEVGSVASFKLVYDRETGKPKGYGFCEYKDQETALSAMRNLNGFEIAGRTLRVD 299
BLAST of EMLSAG00000006627 vs. C. finmarchicus
Match: gi|592786371|gb|GAXK01168197.1| (TSA: Calanus finmarchicus comp1304_c3_seq1 transcribed RNA sequence) HSP 1 Score: 50.447 bits (119), Expect = 3.148e-6 Identity = 25/83 (30.12%), Postives = 45/83 (54.22%), Query Frame = 0
Query: 100 DPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSE-DKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERAR 181
D +L +G I + T + L+ FE YG + + +P D E + RGFAF+ + ++D A + +G+ +GR + V ++ R
Sbjct: 83 DKMTSLRVGNIPFKTHQEDLKEVFEKYGEVGDVFIPSDRETGRTRGFAFVRFYDKKDAEDAMEELNGRTFEGRDLRVSIDEGR 331
BLAST of EMLSAG00000006627 vs. C. finmarchicus
Match: gi|592856441|gb|GAXK01101103.1| (TSA: Calanus finmarchicus comp6962_c0_seq1 transcribed RNA sequence) HSP 1 Score: 50.0618 bits (118), Expect = 4.355e-6 Identity = 28/77 (36.36%), Postives = 40/77 (51.95%), Query Frame = 0
Query: 104 TLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSEDK-PRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
+L + + Y TS L FE YG + I +PKD K RGFAF+ Y +RD A DG+ DGR + + + +
Sbjct: 90 SLKVDNLTYRTSNEDLEYLFEKYGKVGDIYIPKDKYTKESRGFAFVRYHDKRDAEDAMDALDGRMYDGRDLRIQMAK 320
BLAST of EMLSAG00000006627 vs. C. finmarchicus
Match: gi|592778542|gb|GAXK01176026.1| (TSA: Calanus finmarchicus comp2336_c0_seq3 transcribed RNA sequence) HSP 1 Score: 49.6766 bits (117), Expect = 7.428e-6 Identity = 27/78 (34.62%), Postives = 46/78 (58.97%), Query Frame = 0
Query: 100 DPYKTLFIGRINYYTSESKLRREFESYGVI-KMIVLPKDSEDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 176
+P K L + ++ YT+E +L +EF +G + K+ V+ + RGFAFI +E D A + +G ++DGR++ VD
Sbjct: 370 EPNKCLGVFGLSLYTTERELDKEFRKFGNLEKVNVVLDGHSGRSRGFAFIYFETMEDATEAREALNGTELDGRKIRVD 603
BLAST of EMLSAG00000006627 vs. C. finmarchicus
Match: gi|592766328|gb|GAXK01188240.1| (TSA: Calanus finmarchicus comp10430_c0_seq1 transcribed RNA sequence) HSP 1 Score: 48.521 bits (114), Expect = 8.805e-6 Identity = 24/75 (32.00%), Postives = 44/75 (58.67%), Query Frame = 0
Query: 105 LFIGRINYYTSESKLRREFESYGVIKMIVLPKDSEDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER 179
LF+ +N TS S+L+ EFE +G + D+ + +G+AF+ ++++ D A + +G I G++V V+V R
Sbjct: 184 LFVYGVNEGTSNSELQTEFEKFGTV------TDTYNTGKGYAFVTFDNKDDASEATEQLNGATILGQQVKVNVAR 390
BLAST of EMLSAG00000006627 vs. L. salmonis peptides
Match: EMLSAP00000006627 (pep:novel supercontig:LSalAtl2s:LSalAtl2s364:612110:616010:-1 gene:EMLSAG00000006627 transcript:EMLSAT00000006627 description:"maker-LSalAtl2s364-augustus-gene-6.41") HSP 1 Score: 723.776 bits (1867), Expect = 0.000e+0 Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSEDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSGREDGGGARERGGRERRSKSRERRSRSRDRRRDRRRSRSRDRKRVRKSRSPSRRRSRSRDRTDRKRRRTRSRERKRERDRRGDRRGGGGGAGSGGAGPEEDFGNRVKTEWDESILVKQEPRDDYDEYHNEYSEVKQEPMDEMDRKPLLNEGYEEGQY 367
MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSEDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSGREDGGGARERGGRERRSKSRERRSRSRDRRRDRRRSRSRDRKRVRKSRSPSRRRSRSRDRTDRKRRRTRSRERKRERDRRGDRRGGGGGAGSGGAGPEEDFGNRVKTEWDESILVKQEPRDDYDEYHNEYSEVKQEPMDEMDRKPLLNEGYEEGQY
Sbjct: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSEDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSGREDGGGARERGGRERRSKSRERRSRSRDRRRDRRRSRSRDRKRVRKSRSPSRRRSRSRDRTDRKRRRTRSRERKRERDRRGDRRGGGGGAGSGGAGPEEDFGNRVKTEWDESILVKQEPRDDYDEYHNEYSEVKQEPMDEMDRKPLLNEGYEEGQY 367
BLAST of EMLSAG00000006627 vs. L. salmonis peptides
Match: EMLSAP00000008559 (pep:novel supercontig:LSalAtl2s:LSalAtl2s527:273623:274748:-1 gene:EMLSAG00000008559 transcript:EMLSAT00000008559 description:"augustus_masked-LSalAtl2s527-processed-gene-1.22") HSP 1 Score: 54.299 bits (129), Expect = 1.752e-8 Identity = 30/93 (32.26%), Postives = 49/93 (52.69%), Query Frame = 0
Query: 103 KTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSEDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLP-RRLGGG 194
L + ++Y T E L REF +G ++ I + +D E + RGF FI++++ D A + +DG+++ VD + G P R LGGG
Sbjct: 230 NVLGVFGLSYSTDEHDLNREFSRFGALESIRIVRDPERRSRGFGFIDFKYVEDAKQARRALCDTYLDGKKIRVDFSLTKEPHGRTPGRYLGGG 322
BLAST of EMLSAG00000006627 vs. L. salmonis peptides
Match: EMLSAP00000000600 (pep:novel supercontig:LSalAtl2s:LSalAtl2s109:434479:437086:1 gene:EMLSAG00000000600 transcript:EMLSAT00000000600 description:"maker-LSalAtl2s109-augustus-gene-4.27") HSP 1 Score: 47.3654 bits (111), Expect = 8.228e-7 Identity = 25/74 (33.78%), Postives = 41/74 (55.41%), Query Frame = 0
Query: 104 TLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSEDK-PRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 176
TL++G ++++T+E +L F G IK IV+ D + P GF F+EY +A + +G ++D R V D
Sbjct: 38 TLYVGNLSFFTTEGQLYELFGKCGDIKRIVMGLDKFKRTPCGFXFVEYYGREXSENAMRFVNGTRLDDRVVRTD 111
BLAST of EMLSAG00000006627 vs. SwissProt
Match: gi|13638469|sp|P17133.2|RU17_DROME (RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1 snRNP 70 kDa; Short=U1-70K; Short=snRNP70) HSP 1 Score: 261.922 bits (668), Expect = 8.049e-83 Identity = 157/212 (74.06%), Postives = 180/212 (84.91%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSED-KPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSG 211
MTQ+ PPNLLALFA REPIP++PP DKLPHEKK + Y G+ FM FE+P+DTP P VE R+ER+ER++REKAEQVAYKLE+EIA+WDP ++ +T DP++TLFI RINY TSESKLRREFE YG IK IVL D E KP+G+AFIEYEHERDMH+AYKHADGKKID +RVLVDVERARTVKGWLPRRLGGGLGGTRRGG +VNI HSG
Sbjct: 1 MTQYLPPNLLALFAAREPIPFMPPVDKLPHEKK-SRGYLGVAKFMADFEDPKDTPLPKTVETRQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERARTVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
BLAST of EMLSAG00000006627 vs. SwissProt
Match: gi|134091|sp|P09406.1|RU17_XENLA (RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1 snRNP 70 kDa; Short=U1-70K; Short=snRNP70) HSP 1 Score: 243.047 bits (619), Expect = 3.847e-75 Identity = 152/218 (69.72%), Postives = 173/218 (79.36%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIK--MIVLPKDSED--KPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSGRED 214
MTQF PPNLLALFAPR+P+PYLPP DKLPHEK Y GI ++ FE+P D P PTR E REER+ERK+REK E+ +E E+ +WDPH+ + + GD +KTLF+ R+NY T+ESKLRREFE YG IK IV K SE KPRG+AFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER RTVKGW PRRLGGGLGGTRRGG +VNI HSGR+D
Sbjct: 1 MTQFLPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRAETREERMERKRREKIERRQQDVENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHIVYNKGSEGSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDD 218
BLAST of EMLSAG00000006627 vs. SwissProt
Match: gi|82234425|sp|Q66II8.1|RU17_XENTR (RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1 snRNP 70 kDa; Short=U1-70K; Short=snRNP70) HSP 1 Score: 240.35 bits (612), Expect = 3.797e-74 Identity = 148/215 (68.84%), Postives = 171/215 (79.53%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDS-EDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSGRED 214
MTQF PPNLLALFAPR+P+PYLPP DKLPHEK Y GI ++ FE+P D P PTR E REER+ERK+REK E+ +E E+ +WDPH+ + + GD +KTLF+ R+NY T+ESKLRREFE YG IK I + + KPRG+AFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER RTVKGW PRRLGGGLGGTRRGG +VNI HSGR+D
Sbjct: 1 MTQFLPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRAETREERMERKRREKIERRQQDVENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDD 215
BLAST of EMLSAG00000006627 vs. SwissProt
Match: gi|13635663|sp|P08621.2|RU17_HUMAN (RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1 snRNP 70 kDa; Short=U1-70K; Short=snRNP70) HSP 1 Score: 234.958 bits (598), Expect = 1.831e-72 Identity = 151/224 (67.41%), Postives = 174/224 (77.68%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMI-VLPKDSEDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSGREDGGGARERGG 223
MTQF PPNLLALFAPR+PIPYLPP +KLPHEK Y GI ++ FE+P D P PTR E REER+ERK+REK E+ ++E E+ +WDPH+ + GD +KTLF+ R+NY T+ESKLRREFE YG IK I ++ KPRG+AFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER RTVKGW PRRLGGGLGGTRRGG +VNI HSGR+D ER G
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRAETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERPG 224
BLAST of EMLSAG00000006627 vs. SwissProt
Match: gi|83305641|sp|Q62376.2|RU17_MOUSE (RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1 snRNP 70 kDa; Short=U1-70K; Short=snRNP70) HSP 1 Score: 235.343 bits (599), Expect = 1.891e-72 Identity = 151/224 (67.41%), Postives = 174/224 (77.68%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMI-VLPKDSEDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSGREDGGGARERGG 223
MTQF PPNLLALFAPR+PIPYLPP +KLPHEK Y GI ++ FE+P D P PTR E REER+ERK+REK E+ ++E E+ +WDPH+ + GD +KTLF+ R+NY T+ESKLRREFE YG IK I ++ KPRG+AFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER RTVKGW PRRLGGGLGGTRRGG +VNI HSGR+D ER G
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRAETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERPG 224
BLAST of EMLSAG00000006627 vs. SwissProt
Match: gi|117940094|sp|Q1RMR2.1|RU17_BOVIN (RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1 snRNP 70 kDa; Short=U1-70K; Short=snRNP70) HSP 1 Score: 234.958 bits (598), Expect = 2.365e-72 Identity = 151/224 (67.41%), Postives = 174/224 (77.68%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMI-VLPKDSEDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSGREDGGGARERGG 223
MTQF PPNLLALFAPR+PIPYLPP +KLPHEK Y GI ++ FE+P D P PTR E REER+ERK+REK E+ ++E E+ +WDPH+ + GD +KTLF+ R+NY T+ESKLRREFE YG IK I ++ KPRG+AFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER RTVKGW PRRLGGGLGGTRRGG +VNI HSGR+D ER G
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRAETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERPG 224
BLAST of EMLSAG00000006627 vs. SwissProt
Match: gi|13633916|sp|Q42404.1|RU17_ARATH (RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1 snRNP 70 kDa; Short=U1-70K; Short=snRNP70) HSP 1 Score: 203.756 bits (517), Expect = 1.736e-60 Identity = 122/256 (47.66%), Postives = 158/256 (61.72%), Query Frame = 0
Query: 8 NLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFE---NPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDS-EDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSGREDGGGARERGG--RERRSKSRER---RSRSRDRRRDRRRSRSRDRKR 254
NLL LF PR P+ Y PP EK+ Y G+ F+ F +PE P VE+ ++ ER + + E+ K +++ +DP++ +TGDPYKTLF+ R+NY +SESK++REFESYG IK + L D +KP+G+AFIEY H RDM +AYK ADG+KIDGRRVLVDVER RTV W PRRLGGGLG +R GG E + + E RE R KSRE+ R RSR+ ++ R RSRDR R
Sbjct: 45 NLLKLFEPRPPLEYKPPP-----EKRKCPPYTGMAQFVSNFAEPGDPEYAPPKPEVELPSQKRERIHKLRLEKGVEKAAEDLKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQADGQKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGGEEIVGEQQPQGRTSQSEEPSRPREEREKSREKGKERERSRELSHEQPRERSRDRPR 295
BLAST of EMLSAG00000006627 vs. SwissProt
Match: gi|74997505|sp|Q55FQ0.1|RU17_DICDI (RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1 snRNP 70 kDa; Short=U1-70K; Short=snRNP70) HSP 1 Score: 156.762 bits (395), Expect = 1.731e-42 Identity = 92/215 (42.79%), Postives = 132/215 (61.40%), Query Frame = 0
Query: 4 FXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAY---KLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSED--KPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSGRE 213
F PPNL +F PR P P P Y G+ ++ F +P + P + E E E++++++ +++ ++ + + WDP+S ++TGDPYKT+F+ RI+Y T++ KL EF +G IK + L KDS + K G+AFIE+E ERDM +AYK ADG KID RR++VD+ER R +K W PR+ GGGLG TR GG +VN SGRE
Sbjct: 3 FLPPNLKIMFNPRHP-----PPFLPPPPPSNLPPYTGLRDYLSIFTDPSNE-EPFKKEHIENLEEKREKKRKLKISENDERISKSLKAWDPYSNSETTGDPYKTIFVSRISYKTTQQKLEFEFGQFGPIKSLFLVKDSNNPEKHTGYAFIEFERERDMKAAYKQADGMKIDDRRIVVDIERGRVIKNWKPRKFGGGLGNTRAGGVDVNQTFSGRE 211
BLAST of EMLSAG00000006627 vs. SwissProt
Match: gi|74675931|sp|O13829.1|RU17_SCHPO (RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa homolog; Short=U1 70K; Short=U1 snRNP 70 kDa homolog; Short=U1-70K; AltName: Full=U1 small nuclear ribonucleoprotein usp101; Short=U1 snRNP protein usp101) HSP 1 Score: 130.568 bits (327), Expect = 1.724e-34 Identity = 86/191 (45.03%), Postives = 116/191 (60.73%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMI-VLPKDSEDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRR 190
M + P LLALFAPR P+ YLPP D +P EK+ T GI ++ ++ + PT E EE+ R + EK +Q +L I VWDP GDPYKT+F+ R++Y T ES + REF YG I+ I V+ K G+AF+ +E ERD+ AYK + G ++GRR++VDVER RTVKGWLPR+
Sbjct: 1 MAEKLPAPLLALFAPRPPLRYLPPMD-VPPEKRSTPRVSGIAKYLKYAQSHDQQYHPT--ESLEEKRLRLRDEKQKQQRERLRSMIKVWDPDHDRHVIGDPYKTMFLSRLSYDTKESDIEREFTRYGPIERIRVVRNKVTGKSMGYAFVVFERERDLKVAYKASAGLMLNGRRIVVDVERGRTVKGWLPRK 188
BLAST of EMLSAG00000006627 vs. SwissProt
Match: gi|75331120|sp|Q8VY74.1|U1135_ARATH (RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa protein; Short=U11/U12 snRNP 35 kDa protein; Short=U11/U12-35K) HSP 1 Score: 89.7373 bits (221), Expect = 6.073e-19 Identity = 45/110 (40.91%), Postives = 66/110 (60.00%), Query Frame = 0
Query: 82 LEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKD-SEDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRR 190
L ++DP K+ GDPY TLF+GR++++T+E LR YG IK + L + RG+ F+EYE E++M AY+ A IDGR ++VD R + + GW+PRR
Sbjct: 43 LCYNAGLYDPSGDSKAVGDPYCTLFVGRLSHHTTEDTLREVMSKYGRIKNLRLVRHIVTGASRGYGFVEYETEKEMLRAYEDAHHSLIDGREIIVDYNRQQLMPGWIPRR 152
BLAST of EMLSAG00000006627 vs. Select Arthropod Genomes
Match: gb|KFM81237.1| (U1 small nuclear ribonucleoprotein, partial [Stegodyphus mimosarum]) HSP 1 Score: 297.36 bits (760), Expect = 4.495e-100 Identity = 162/215 (75.35%), Postives = 183/215 (85.12%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSED-KPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSGRED 214
MTQF PPNLLALFAPR+PIPYLPP DKLP+EKK T Y GI +F++ FE+P++TP P R+E REER ERK++EKAEQVAYKLEQ+IA+W P + +T DPYKTLF+ R+NY TSESKLRREFE YG IK IV+ D KPRG+AFIEYE ERDMHSAYKHADGKKIDGRRVLVDVER RTVKGWLPRRLGGGLGGTRRGGPEVN+ HSGRE+
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPVDKLPYEKK-TAGYTGIASFVNQFEDPKNTPPPLRIETREERQERKRKEKAEQVAYKLEQDIALWSPAANPAATTDPYKTLFVARVNYDTSESKLRREFEVYGHIKKIVIVHDKNTGKPRGYAFIEYERERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWLPRRLGGGLGGTRRGGPEVNVKHSGREE 214
BLAST of EMLSAG00000006627 vs. Select Arthropod Genomes
Match: EEB10165.1 (U1 small nuclear ribonucleoprotein 70 kDa, putative [Pediculus humanus corporis]) HSP 1 Score: 287.73 bits (735), Expect = 6.044e-95 Identity = 166/212 (78.30%), Postives = 189/212 (89.15%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSED-KPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSG 211
MTQF PPNLLALFAPR+PIP+LPP DKLPHEKK Y+G+GAF+ FE+P+DTP PTRVE R+ER+ER++RE+AEQVAYKLEQEIAVWDPH++ +TGDP+KTLF+ RINY TSE KLRREFE YG IK IV+ ++ + KPRG+AFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGP+VNI HSG
Sbjct: 1 MTQFLPPNLLALFAPRDPIPFLPPPDKLPHEKK-NRGYQGVGAFIKYFEDPKDTPPPTRVETRDERLERRRRERAEQVAYKLEQEIAVWDPHNIPIATGDPFKTLFVARINYDTSEFKLRREFEVYGPIKKIVVSHNTINGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
BLAST of EMLSAG00000006627 vs. Select Arthropod Genomes
Match: gb|EFA00117.1| (U1 small nuclear ribonucleoprotein 70 kDa-like Protein [Tribolium castaneum]) HSP 1 Score: 279.256 bits (713), Expect = 2.805e-90 Identity = 170/211 (80.57%), Postives = 185/211 (87.68%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSED-KPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHS 210
MTQF PPNLLALFAPR+PIPYLPP KLPHEKK + Y G+GAF+ FE+P+DTP PTRVE REERIER++RE+AEQVAYKLEQEIAVWDP+S T DP+KTLF+ RINY TSESKLRREFE YG IK IVL +S + KPRG+AFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNI HS
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPVAKLPHEKK-SRGYLGVGAFLKEFEDPKDTPPPTRVETREERIERRRRERAEQVAYKLEQEIAVWDPNSAPNITVDPFKTLFVARINYDTSESKLRREFEVYGPIKKIVLIHNSVNGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNIKHS 210
BLAST of EMLSAG00000006627 vs. Select Arthropod Genomes
Match: EAL41962.3 (AGAP006755-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 276.559 bits (706), Expect = 5.758e-89 Identity = 162/212 (76.42%), Postives = 187/212 (88.21%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSED-KPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSG 211
MTQ+ P NLLALFAPR+PIPYLPP DKLPHEKK + Y G+GAF+D FE+P+DTP PTRVE REER+ER++RE+AEQVAYKLE+EIA WDP+ + ++T DP+KTLF+ RINY TSESKLRREFE YG IK I++ D + KPRG+AFIEYEHERDMH+AYKHADGKKIDG+RVLVDVERARTVKGWLPRRLGGGLGGTRRGGP+VNI HSG
Sbjct: 1 MTQYLPSNLLALFAPRDPIPYLPPPDKLPHEKK-SQGYLGVGAFLDCFEDPKDTPPPTRVETREERVERRRRERAEQVAYKLEREIATWDPNQLLEATEDPFKTLFVARINYDTSESKLRREFEIYGNIKKIIMINDKDTGKPRGYAFIEYEHERDMHAAYKHADGKKIDGKRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
BLAST of EMLSAG00000006627 vs. Select Arthropod Genomes
Match: gb|EEC13824.1| (SN-RNP U1, putative [Ixodes scapularis]) HSP 1 Score: 271.552 bits (693), Expect = 1.996e-87 Identity = 162/215 (75.35%), Postives = 183/215 (85.12%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDS-EDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSGRED 214
MTQ+ PPNLLALFAPREPIPYLPP DKLPHEK Y G+G ++ FE+P+DTP PTRVE REER+ERK+REKAEQVAYKLEQ+IA+W+PH+ T DP+KTLF+ R+NY TSESKLRREFE +G IK IV+ + KPRG+AF+EYEHERDMHSAYKHADGKKIDGRRVLVDVER RTVKGWLPRRLGGGLGGTRRGGP+VN HSGRED
Sbjct: 1 MTQYLPPNLLALFAPREPIPYLPPTDKLPHEK-TPGTYTGVGKYLSLFEDPKDTPPPTRVETREERVERKRREKAEQVAYKLEQDIALWEPHNNAAGTVDPFKTLFVARVNYDTSESKLRREFEVFGSIKKIVIVHNKITGKPRGYAFVEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWLPRRLGGGLGGTRRGGPDVNTKHSGRED 214
BLAST of EMLSAG00000006627 vs. Select Arthropod Genomes
Match: XP_623789.3 (PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform X2 [Apis mellifera]) HSP 1 Score: 271.166 bits (692), Expect = 4.339e-87 Identity = 163/212 (76.89%), Postives = 182/212 (85.85%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSED-KPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSG 211
MTQF PPNLLALFAPR+PIPYLPP KLPHEKK Y G+G F+ FE+P+DTP P RVE REER+ER++RE+AEQVAYKLEQEIAVWDP + T DP+KTLF+ RINY TSESKLRREFE YG +K IV+ ++ + KPRG+AFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGP+VNI HSG
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPVSKLPHEKK-NGGYIGVGGFLKYFEDPKDTPPPVRVETREERLERRRRERAEQVAYKLEQEIAVWDPAGILNVTADPFKTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
BLAST of EMLSAG00000006627 vs. Select Arthropod Genomes
Match: AGB92709.1 (small ribonucleoprotein particle U1 subunit 70K, isoform C [Drosophila melanogaster]) HSP 1 Score: 261.922 bits (668), Expect = 3.901e-83 Identity = 157/212 (74.06%), Postives = 180/212 (84.91%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSED-KPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSG 211
MTQ+ PPNLLALFA REPIP++PP DKLPHEKK + Y G+ FM FE+P+DTP P VE R+ER+ER++REKAEQVAYKLE+EIA+WDP ++ +T DP++TLFI RINY TSESKLRREFE YG IK IVL D E KP+G+AFIEYEHERDMH+AYKHADGKKID +RVLVDVERARTVKGWLPRRLGGGLGGTRRGG +VNI HSG
Sbjct: 1 MTQYLPPNLLALFAAREPIPFMPPVDKLPHEKK-SRGYLGVAKFMADFEDPKDTPLPKTVETRQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERARTVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
BLAST of EMLSAG00000006627 vs. Select Arthropod Genomes
Match: AAF52471.1 (small ribonucleoprotein particle U1 subunit 70K, isoform A [Drosophila melanogaster]) HSP 1 Score: 261.922 bits (668), Expect = 3.901e-83 Identity = 157/212 (74.06%), Postives = 180/212 (84.91%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSED-KPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSG 211
MTQ+ PPNLLALFA REPIP++PP DKLPHEKK + Y G+ FM FE+P+DTP P VE R+ER+ER++REKAEQVAYKLE+EIA+WDP ++ +T DP++TLFI RINY TSESKLRREFE YG IK IVL D E KP+G+AFIEYEHERDMH+AYKHADGKKID +RVLVDVERARTVKGWLPRRLGGGLGGTRRGG +VNI HSG
Sbjct: 1 MTQYLPPNLLALFAAREPIPFMPPVDKLPHEKK-SRGYLGVAKFMADFEDPKDTPLPKTVETRQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERARTVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
BLAST of EMLSAG00000006627 vs. Select Arthropod Genomes
Match: XP_006559075.1 (PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform X1 [Apis mellifera]) HSP 1 Score: 257.299 bits (656), Expect = 2.106e-81 Identity = 163/237 (68.78%), Postives = 182/237 (76.79%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSED-KPRGFAFIEYEHERDMHS-------------------------AYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSG 211
MTQF PPNLLALFAPR+PIPYLPP KLPHEKK Y G+G F+ FE+P+DTP P RVE REER+ER++RE+AEQVAYKLEQEIAVWDP + T DP+KTLF+ RINY TSESKLRREFE YG +K IV+ ++ + KPRG+AFIEYEHERDMHS AYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGP+VNI HSG
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPVSKLPHEKK-NGGYIGVGGFLKYFEDPKDTPPPVRVETREERLERRRRERAEQVAYKLEQEIAVWDPAGILNVTADPFKTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDMHSWWPLPATSAVHYSMHYSLNLPDMIAAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 236
BLAST of EMLSAG00000006627 vs. Select Arthropod Genomes
Match: gb|KPM05642.1| (U1 small nuclear ribonucleoprotein 70 kDa-like protein [Sarcoptes scabiei]) HSP 1 Score: 203.371 bits (516), Expect = 4.286e-61 Identity = 118/209 (56.46%), Postives = 145/209 (69.38%), Query Frame = 0
Query: 28 LPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDS-EDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSGREDGGGARERGGRERRSKSRERRS 235
L EKK TH Y G+G ++ FE+P+DTP PT++E REER+ERK +EKAE+ AY EQ IA+WDP++ ST DPYKTLF+ RIN TSESKL++EFE+YG ++ I+L D KPRG+AFIE+E+E+DMH+AYKHADGKKI+GRRVLVDVER RTVKGWLPRRLG RRGG R +SR RS
Sbjct: 161 LTFEKK-THGYFGVGHYVHMFEDPKDTPPPTKIETREERLERKLKEKAERAAYLREQGIALWDPYNNSNSTTDPYKTLFVARINPDTSESKLKKEFEAYGPVRKIMLIHDKISGKPRGYAFIEFENEKDMHAAYKHADGKKIEGRRVLVDVERGRTVKGWLPRRLGYRDRYDRRGG----------------------YDRERSRRSRS 346
BLAST of EMLSAG00000006627 vs. nr
Match: gi|675388340|gb|KFM81237.1| (U1 small nuclear ribonucleoprotein, partial [Stegodyphus mimosarum]) HSP 1 Score: 297.36 bits (760), Expect = 2.199e-97 Identity = 162/215 (75.35%), Postives = 183/215 (85.12%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSED-KPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSGRED 214
MTQF PPNLLALFAPR+PIPYLPP DKLP+EKK T Y GI +F++ FE+P++TP P R+E REER ERK++EKAEQVAYKLEQ+IA+W P + +T DPYKTLF+ R+NY TSESKLRREFE YG IK IV+ D KPRG+AFIEYE ERDMHSAYKHADGKKIDGRRVLVDVER RTVKGWLPRRLGGGLGGTRRGGPEVN+ HSGRE+
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPVDKLPYEKK-TAGYTGIASFVNQFEDPKNTPPPLRIETREERQERKRKEKAEQVAYKLEQDIALWSPAANPAATTDPYKTLFVARVNYDTSESKLRREFEVYGHIKKIVIVHDKNTGKPRGYAFIEYERERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWLPRRLGGGLGGTRRGGPEVNVKHSGREE 214
BLAST of EMLSAG00000006627 vs. nr
Match: gi|193657247|ref|XP_001947021.1| (PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Acyrthosiphon pisum]) HSP 1 Score: 297.745 bits (761), Expect = 5.725e-95 Identity = 156/212 (73.58%), Postives = 183/212 (86.32%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSED-KPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSG 211
MTQ+ P NLL LFAPR+PIPYLPP KL HEKK Y G+G+FMD FE+P+DTP PT +E +E+++ER++REKAEQVAYKLEQEIA W+PHS + DP+KTLF+ RINY TSESKLRREFE YG+IK IV+ ++ D KPRG+AFIEYE+ERDM+SAYK+ADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVN++HSG
Sbjct: 1 MTQYLPHNLLTLFAPRDPIPYLPPVSKLSHEKK-NRGYSGVGSFMDLFEDPKDTPPPTTIETKEDKLERRRREKAEQVAYKLEQEIAAWNPHSDANAVTDPFKTLFVARINYDTSESKLRREFELYGLIKKIVVTRNKIDGKPRGYAFIEYENERDMYSAYKYADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNLIHSG 211
BLAST of EMLSAG00000006627 vs. nr
Match: gi|675871682|ref|XP_009021401.1| (hypothetical protein HELRODRAFT_113249 [Helobdella robusta] >gi|555697118|gb|ESO00351.1| hypothetical protein HELRODRAFT_113249 [Helobdella robusta]) HSP 1 Score: 296.975 bits (759), Expect = 6.035e-95 Identity = 150/215 (69.77%), Postives = 179/215 (83.26%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMI-VLPKDSEDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSGRED 214
MTQF PPNLLALFA R+PIPYLPP DKLPHEK+ + Y G+ F+ FENP++TP PTRVE REE+ ERK++E+AEQ AYKLEQ++A+WDP + K GDP+KTLF+ R+N+ TSESKLRREF+ YG IK I ++ +KPRG+AF+EYEHERDMH+AYKHADGKKIDGRRVLVDVER RTVKGW PRRLGGGLG TR+GGPEVN +SGR+D
Sbjct: 1 MTQFLPPNLLALFAARDPIPYLPPVDKLPHEKE-SKPYIGVADFVRQFENPKETPPPTRVETREEKKERKRKERAEQTAYKLEQDLALWDPSNDNKIYGDPFKTLFVARVNFDTSESKLRREFDQYGPIKKIHMITSTKNNKPRGYAFVEYEHERDMHAAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGNTRKGGPEVNTKYSGRDD 214
BLAST of EMLSAG00000006627 vs. nr
Match: gi|1108469406|emb|CRL01961.1| (CLUMA_CG015409, isoform A [Clunio marinus]) HSP 1 Score: 296.59 bits (758), Expect = 9.782e-95 Identity = 169/216 (78.24%), Postives = 190/216 (87.96%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSED-KPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSGREDG 215
MTQF PPNLLALFA R+PIPYLPP DKLPHEKK T Y G+GAF+ GFE+P+DTP PTRVE +EER+ER++REKAEQVAYKLE+EIA+WDP+ +E T DP+KTLF+ R NY TSESKLRREFE YG IK I++ +D + KPRG+AFIEYEHERDMHSAYKHADGKKIDG+RVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNI HSGRED
Sbjct: 1 MTQFLPPNLLALFAARDPIPYLPPPDKLPHEKK-TRGYTGVGAFLSGFEDPKDTPPPTRVETKEERLERRRREKAEQVAYKLEREIALWDPNGIENLTEDPFKTLFVARFNYDTSESKLRREFEMYGPIKKIIMIQDVDSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGKRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNIKHSGREDN 215
BLAST of EMLSAG00000006627 vs. nr
Match: gi|1005963340|ref|XP_015789910.1| (PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Tetranychus urticae]) HSP 1 Score: 292.738 bits (748), Expect = 4.970e-94 Identity = 155/216 (71.76%), Postives = 178/216 (82.41%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDS-EDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSGREDG 215
MTQ+ PPNLLALFAPR+PIPYLPP DKLP +KK T Y G+ ++ FE+P+DTP P R+E REE +ERK+REKAEQV Y+LEQ IA+WDP + +T DPYKTLF+ RINY TSESKLRREFE+YG IK +V+ D K RG+AFIEYEHERDMH+AYK+ADGKKIDGRRVLVDVER RTVKGWLPR+LGGGLGGTRRGGPE N HSGRED
Sbjct: 1 MTQYLPPNLLALFAPRDPIPYLPPVDKLPFQKKTT-GYIGVSKYLSYFEDPKDTPPPKRIESREEHLERKRREKAEQVVYRLEQRIALWDPQNNATATTDPYKTLFVARINYDTSESKLRREFEAYGTIKKVVIVHDKISGKHRGYAFIEYEHERDMHAAYKYADGKKIDGRRVLVDVERGRTVKGWLPRKLGGGLGGTRRGGPEQNAKHSGREDN 215
BLAST of EMLSAG00000006627 vs. nr
Match: gi|1067077224|ref|XP_018022223.1| (PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Hyalella azteca]) HSP 1 Score: 293.508 bits (750), Expect = 1.743e-93 Identity = 166/243 (68.31%), Postives = 193/243 (79.42%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMI-VLPKDSEDKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSGREDGGGARERGGRERRSKSRERRSRSRDRRR 242
MTQ+ PPNLLALFA R+PIPYLPP DKL EKK T Y G+ + + FE+P +TP P VE R+ER+ERK+REKAEQ+ YKLEQEIA+WDPH++ +T DPYKTLF+ RINY TSESKLRREFE YG IK I ++ + +KPRG+AFIEYEHERDMHSAYK+ADG+KID RRVLVDVERARTVKGWL RRLGGGLGGTRRGGP+VNI HSGRED R+RG + R +RSRDR R
Sbjct: 1 MTQYLPPNLLALFAARDPIPYLPPVDKLTWEKK-TDGYSGVASLIHRFEDPANTPPPKHVETRDERMERKRREKAEQIQYKLEQEIAMWDPHNIPDATSDPYKTLFVARINYDTSESKLRREFEIYGPIKKIRMIVNTTNNKPRGYAFIEYEHERDMHSAYKNADGRKIDNRRVLVDVERARTVKGWLSRRLGGGLGGTRRGGPDVNIKHSGREDD---RKRGNDD---MDRSEPARSRDRSR 236
BLAST of EMLSAG00000006627 vs. nr
Match: gi|985398486|ref|XP_015366817.1| (PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Diuraphis noxia]) HSP 1 Score: 291.582 bits (745), Expect = 2.048e-92 Identity = 169/212 (79.72%), Postives = 188/212 (88.68%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSED-KPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSG 211
MTQF PPNLLALFAPR+PIPYLPP KLPHEKK T Y G+G+FMD FE+PEDTP PT++E REER+ER++REKAEQVAYKLEQEIA+W+PHSV +T DP+KTLF+ RINY TSESKLRREFE YG IK IV+ + D KPRG+AFIEYE+ERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVN+ HSG
Sbjct: 1 MTQFLPPNLLALFAPRDPIPYLPPVAKLPHEKK-TRGYLGVGSFMDLFEDPEDTPPPTKIETREERLERRRREKAEQVAYKLEQEIALWEPHSVANATTDPFKTLFVARINYDTSESKLRREFELYGPIKKIVVTHNKIDGKPRGYAFIEYEYERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNLKHSG 211
BLAST of EMLSAG00000006627 vs. nr
Match: gi|242003896|ref|XP_002422903.1| (U1 small nuclear ribonucleoprotein 70 kDa, putative [Pediculus humanus corporis] >gi|212505785|gb|EEB10165.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Pediculus humanus corporis]) HSP 1 Score: 287.73 bits (735), Expect = 2.957e-92 Identity = 166/212 (78.30%), Postives = 189/212 (89.15%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSED-KPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSG 211
MTQF PPNLLALFAPR+PIP+LPP DKLPHEKK Y+G+GAF+ FE+P+DTP PTRVE R+ER+ER++RE+AEQVAYKLEQEIAVWDPH++ +TGDP+KTLF+ RINY TSE KLRREFE YG IK IV+ ++ + KPRG+AFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGP+VNI HSG
Sbjct: 1 MTQFLPPNLLALFAPRDPIPFLPPPDKLPHEKK-NRGYQGVGAFIKYFEDPKDTPPPTRVETRDERLERRRRERAEQVAYKLEQEIAVWDPHNIPIATGDPFKTLFVARINYDTSEFKLRREFEVYGPIKKIVVSHNTINGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
BLAST of EMLSAG00000006627 vs. nr
Match: gi|193662169|ref|XP_001952270.1| (PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Acyrthosiphon pisum]) HSP 1 Score: 290.426 bits (742), Expect = 7.587e-92 Identity = 168/212 (79.25%), Postives = 188/212 (88.68%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSED-KPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSG 211
MTQF PPNLLALFAPR+P+PYLPP KLPHEKK T Y G+G+FMD FE+PEDTP PT++E REER+ER++REKAEQVAYKLEQEIA+W+PHSV +T DP+KTLF+ RINY TSESKLRREFE YG IK IV+ + D KPRG+AFIEYE+ERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVN+ HSG
Sbjct: 1 MTQFLPPNLLALFAPRDPVPYLPPVAKLPHEKK-TRGYLGVGSFMDLFEDPEDTPPPTKIETREERLERRRREKAEQVAYKLEQEIALWEPHSVANATTDPFKTLFVARINYDTSESKLRREFELYGPIKKIVVTHNKIDGKPRGYAFIEYEYERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNLKHSG 211
BLAST of EMLSAG00000006627 vs. nr
Match: gi|646717843|gb|KDR20541.1| (U1 small nuclear ribonucleoprotein 70 kDa [Zootermopsis nevadensis]) HSP 1 Score: 289.656 bits (740), Expect = 1.981e-91 Identity = 166/212 (78.30%), Postives = 188/212 (88.68%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDGFENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSED-KPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSG 211
MTQF PPNLLALFAPR+P+PYLPP DKLPHEKK Y G+G F+ FE+P+DTP PTRVE R+ER+ER++RE+AEQVAYKLEQEIAVWDPHS+ +TGDP+KTLF+ RINY +SESKLRREFE YG IK IV+ ++ + KPRG+AFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGP+VNI HSG
Sbjct: 1 MTQFLPPNLLALFAPRDPVPYLPPPDKLPHEKK-NRGYVGVGCFLQYFEDPKDTPPPTRVETRDERLERRRRERAEQVAYKLEQEIAVWDPHSIPTATGDPFKTLFVARINYDSSESKLRREFEVYGPIKKIVVTHNTVNGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
BLAST of EMLSAG00000006627 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold161_size295871-snap-gene-0.9 (protein:Tk05097 transcript:maker-scaffold161_size295871-snap-gene-0.9-mRNA-1 annotation:"hypothetical protein HELRODRAFT_113249") HSP 1 Score: 304.679 bits (779), Expect = 2.016e-102 Identity = 164/217 (75.58%), Postives = 185/217 (85.25%), Query Frame = 0
Query: 1 MTQFXPPNLLALFAPREPIPYLPPADKLPHEKKVTHNYEGIGAFMDG-FENPEDTPAPTRVEMREERIERKKREKAEQVAYKLEQEIAVWDPHSVEKSTGDPYKTLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSE-DKPRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNILHSGREDG 215
MTQF PPNLLALFAPREPIPYLPP DKLP +KK HNY G+ F+ G FE+P+DTP P + E R+ER+ RKKREK EQVAYKLEQEIA+WDP SV + T DP+KTLF+GRINYY+SESK+RREFESYG IK I + D + +KPRG+ FIE+EHERDMHSAYK ADG KIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGG +VN+ HSGREDG
Sbjct: 1 MTQFLPPNLLALFAPREPIPYLPPPDKLPSQKKNVHNYLGVAQFIAGNFEDPKDTPPPVKAETRDERLARKKREKEEQVAYKLEQEIALWDPSSVPEITTDPFKTLFVGRINYYSSESKIRREFESYGSIKKIQVCTDPKSEKPRGYCFIEFEHERDMHSAYKKADGMKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGADVNVRHSGREDG 217
BLAST of EMLSAG00000006627 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1541_size36691-snap-gene-0.9 (protein:Tk04153 transcript:maker-scaffold1541_size36691-snap-gene-0.9-mRNA-1 annotation:"hypothetical protein SINV_03383") HSP 1 Score: 47.7506 bits (112), Expect = 5.449e-7 Identity = 24/74 (32.43%), Postives = 40/74 (54.05%), Query Frame = 0
Query: 104 TLFIGRINYYTSESKLRREFESYGVIKMIVLPKDSEDK-PRGFAFIEYEHERDMHSAYKHADGKKIDGRRVLVD 176
TL++G +++YT+E +L F G +K IV+ D + P GF FIE+ D A + + ++D R + D
Sbjct: 28 TLYVGNMSFYTTEEQLYALFGQCGEVKRIVMGLDKFKRTPCGFCFIEFYQRGDAEHAMAYINSTRLDERTIRTD 101 The following BLAST results are available for this feature:
BLAST of EMLSAG00000006627 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
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BLAST of EMLSAG00000006627 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000006627 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 3
BLAST of EMLSAG00000006627 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 25
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BLAST of EMLSAG00000006627 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 25
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BLAST of EMLSAG00000006627 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000006627 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 2
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s364:612110..616010- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000006627-689393 ID=EMLSAG00000006627-689393|Name=EMLSAG00000006627|organism=Lepeophtheirus salmonis|type=gene|length=3901bp|location=Sequence derived from alignment at LSalAtl2s364:612110..616010- (Lepeophtheirus salmonis)back to top Add to Basket
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