EMLSAT00000000341, EMLSAT00000000341-696188 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000341
Unique NameEMLSAT00000000341-696188
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s104supercontigLSalAtl2s104:668098..671171 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000341 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000341EMLSAG00000000341-683107Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001590EMLSAE00000001590-710518Lepeophtheirus salmonisexon
EMLSAE00000001591EMLSAE00000001591-710519Lepeophtheirus salmonisexon
EMLSAE00000001592EMLSAE00000001592-710520Lepeophtheirus salmonisexon
EMLSAE00000001593EMLSAE00000001593-710521Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779231auto779231Lepeophtheirus salmonispolypeptide
EMLSAP00000000341EMLSAP00000000341Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000341

>EMLSAP00000000341 ID=EMLSAP00000000341|Name=EMLSAP00000000341|organism=Lepeophtheirus salmonis|type=polypeptide|length=665bp
MNVVRSNDIPIYDLTVGKSLPEWLDERKRRTLVKKNEYLRRRIELLQEFD
MPGVSDLIRISPDGEYIVATGTYKPRVKAYELRQLGLKFERCFDAEVRAF
RLLGDDYAKMIFLQADRYVEIHAQGGKNCDVYFAGDGPSITRLNLEQGRF
LSPLSDESDCSVSNDSIKINPIHQLIMVGSNDGKIRAWDHRVRKIVGALD
IGSAVGIPSLAFRHNDGLNLAAGTMDGRILLYDIRSSKPLLEKDHMYERP
IKKIKFHTTLDQVLSLDEKVLKVWDRNTGKPYAAIEGSVILNDFDIFPGS
GLLVIANEQPKMQVHYIPNLGPAPKWCGFLDNITEELEESETTELYDDYK
FLTREELDNLSLEHLVGTPLLRAHMHGYFIDVRLYRKAKSLVKPYTIDKF
LKDKVRSKLDEQAEKRVKIHSNLPSVNKDLFLKLKDKEDTEEIKKSKKKP
SDESLLKDDRFSSLFKDPRFQVDTTEEVYRLINPVVSKLGDSKRKKLEEK
YQVVDENESEKSDISDLEYDSSSDEEQGKVWADEVRNVHKKLQIEKLEAK
RREREEKLATKLSKISEASNNRPKFYEIKHGDSQSKAKHKNKSLEDRIKN
EDGEVVRRHRDGHEMSFELKKSFSQLRREKEMKEHREERESVRRSASHLK
KKKIAPKFWMGKRVN
back to top

mRNA from alignment at LSalAtl2s104:668098..671171+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000341-696188 ID=EMLSAT00000000341-696188|Name=EMLSAT00000000341|organism=Lepeophtheirus salmonis|type=mRNA|length=3074bp|location=Sequence derived from alignment at LSalAtl2s104:668098..671171+ (Lepeophtheirus salmonis)
TGAAAAGCAAAACAAATAACAAAGGCACGTGTGACTGTTATGATTTGATC
CAGATATATTTTTATTTACGGACAAATGATTCTATAGTTGCAAAATGAAT
GTTGTTAGGAGTAACGATATACCTATTTATGATTTGACGGTAGGAAAATC
CTTACCAGAATGGCTGGACGAAAGGAAACGAAGGACTCTTGTGAAGAAGA
ACGAATATCTTCGACGTCGAATCGAGTTACTTCAGGTAATTAATTATTTA
TATAGTTATCATAATGAATTTGAATTTTTTTTTCTCCTTATTAGGAATTT
GATATGCCTGGAGTAAGTGATTTGATACGAATATCACCAGACGGCGAATA
CATCGTTGCTACAGGAACGTACAAGCCTCGAGTTAAGGCTTATGAATTAA
GACAATTAGGTCTTAAATTTGAGAGATGTTTCGATGCTGAAGTGAGAGCT
TTTCGACTATTAGGTGATGATTACGCTAAAATGATATTCTTACAAGCAGA
TCGTTATGTAGAGATCCATGCCCAAGGAGGAAAGTACTACAGACTTCGCA
TTCCCAAATTTGGTAGAGATCTTGAGTATCACAAAGGAACTGCGATGTTT
ACTTTGCTGGAGATGGTCCAAGCATAACTCGTCTTAATTTGGAACAAGGA
CGTTTTCTTAGTCCACTCTCTGAGTATGTTTAATTGATTATTACTTAAAT
TATTATTTTGAAAAGAGCTCATTAATTTTATTTTTCCAGTGAATCAGATT
GCTCTGTATCCAATGACTCTATCAAAATTAATCCCATACATCAATTAATC
ATGGTTGGCTCAAATGATGGTAAAATTCGTGCCTGGGATCATCGTGTTCG
TAAAATTGTTGGGGCTCTGGATATTGGATCTGCAGTAGGCATTCCTTCAC
TTGCTTTCAGACACAACGATGGCCTCAATTTAGCAGCAGGAACGATGGAT
GGCCGTATTTTACTCTATGATATTCGATCCTCTAAGCCTCTTCTCGAAAA
AGACCATATGTATGAAAGGCCCATCAAAAAAATTAAGTTTCATACCACTC
TTGATCAAGTCCTCTCTCTTGATGAAAAAGTTTTAAAAGTGTGGGATCGT
AATACAGGGAAGCCCTACGCAGCTATCGAAGGCTCAGTTATTCTTAATGA
CTTTGATATATTTCCTGGTTCGGGTCTCTTAGTGATAGCCAATGAACAAC
CTAAAATGCAAGTACATTATATACCTAATCTTGGACCTGCTCCCAAATGG
TGTGGATTTTTGGACAATATTACTGAAGAACTTGAAGAAAGTGAAACAAC
TGAATTGTATGATGACTATAAATTTCTCACTCGTGAAGAATTAGATAATT
TAAGTTTAGAACATCTCGTGGGTACTCCACTTTTGAGAGCACATATGCAT
GGATACTTTATTGATGTAAGACTTTATCGTAAAGCCAAGTCGTTGGTCAA
GCCCTATACAATCGACAAATTCCTCAAAGATAAGGTTCGCAGTAAATTAG
ACGAACAAGCAGAGAAACGGGTCAAGATACATAGTAATCTACCCTCGGTA
AATAAGGATCTATTCCTTAAACTTAAAGATAAAGAAGATACAGAAGAAAT
TAAAAAAAGCAAGAAGAAACCAAGTGACGAATCACTTCTTAAAGATGATC
GTTTTAGCTCTCTATTTAAGGATCCTCGCTTCCAAGTTGATACTACTGAA
GAGGTGTACAGACTAATAAATCCAGTAGTTTCTAAACTTGGCGATTCTAA
ACGAAAAAAACTCGAAGAGAAGTATCAAGTTGTTGATGAAAATGAGTCAG
AGAAGAGTGATATATCAGACTTAGAGTATGACTCATCGTCGGATGAAGAA
CAAGGCAAAGTTTGGGCCGATGAAGTTAGAAACGTACATAAAAAACTTCA
AATAGAAAAGTTGGAAGCGAAAAGGCGTGAAAGGGAAGAAAAATTAGCAA
CCAAATTATCGAAAATATCTGAGGCATCAAATAATAGACCGAAGTTCTAC
GAGATCAAACATGGTGATTCTCAAAGTAAAGCAAAACACAAAAATAAAAG
TTTAGAAGATAGGATCAAAAATGAAGATGGTGAAGTCGTACGGAGACATA
GGGATGGTCATGAAATGTCTTTTGAATTAAAGAAAAGTTTTAGTCAATTG
CGGAGAGAAAAGGAAATGAAGGAGCACAGGGAAGAGAGGGAATCAGTCCG
GAGATCCGCGTCCCACTTGAAGAAAAAGAAAATAGCTCCCAAATTTTGGA
TGGGAAAGAGAGTTAATTAAAATTGTTGTATTTGTACTCATTACAAAGAT
ATCCACATTCAGCATTATAAAACATTGATTGACTAATTAATATTATCCTT
CATTACCGCAGTTATTAACTTTTTCCAAGTGTTCTGCAGCAACTTTATTC
TCTATATGAGTGCATATAGTTGAAAACGGATTCTTAGCATACTCTGGATG
ATTTTTGACGGCCTCGAAGAAACTAGCATTTTTAATAAATTCATTTTGTC
TCTTTTTCTGCTTTAAGGTACCTCTTTTCCCCTTGAGCTTCTTTTTTGAC
TCTCGATTTCGTCGGGAGTCATCCTTCTCCAACACTTTGTCAATAGCTTC
CAAGGTGTCTTTCATTGGGTCCAAATCTCCTATAACAGCTCTTTTCCTCC
TAAACGAAGTAGCACGGTCTGCCTTCATTTTTTTGGCACCTTCTGATAGT
TTATTTAGTAAGAATTCTTTTCGAACCTTCATCTTATCAGATTTTTTCAT
CTTCCGGGATAAGGAGACACCAGGTTTCTCTTTTTTGATATTATGTTGAA
TAGTGAACTCAGGCAATTTCCTAGCACTAAGCATTAAAATGTCTGTACTC
TCTTGAGGAATTTTAGAAGACTTTTTTAAGGTGATCAGATCTAAAGATGT
CATGTTCTTGATTCGAGACATACTTAACTTAGTGTCTTTAGTAGATGAGG
CGACATTGGCCTTTTTAGTTAGGGTTAGCTTTTTATTGAGACGACCCATC
GTAGCTGAAAACAAGTAATACATCAAGTTATTAGAATCAAATCCCTAAAA
AATAATTCTGATTATCAACATTTA
back to top
Add to Basket