EMLSAT00000001089, EMLSAT00000001089-696936 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001089
Unique NameEMLSAT00000001089-696936
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s117supercontigLSalAtl2s117:781815..785022 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001089 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001089EMLSAG00000001089-683855Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004774EMLSAE00000004774-713702Lepeophtheirus salmonisexon
EMLSAE00000004775EMLSAE00000004775-713703Lepeophtheirus salmonisexon
EMLSAE00000004776EMLSAE00000004776-713704Lepeophtheirus salmonisexon
EMLSAE00000004777EMLSAE00000004777-713705Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779686auto779686Lepeophtheirus salmonispolypeptide
EMLSAP00000001089EMLSAP00000001089Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001089

>EMLSAP00000001089 ID=EMLSAP00000001089|Name=EMLSAP00000001089|organism=Lepeophtheirus salmonis|type=polypeptide|length=599bp
MPVKLTGGALLSICQGDRVENPVLQILGNKKINGSSSDRYRLLISDGDYS
NSFAMLATQMNDKIHNGQLENYTVVSVKKYVCNNMQGKKVIILLDIDIST
PGAEIGEKLGNPRAINPDGTVNEKPSSSGGNSSSSNQKRYGDDAGLNAPP
SKKTPLAPQXPPRSSILXPRPVIGSSXXPSTNIMPINSLTPYQNKWTIQG
RVTNKSDIRRWSNSRGEGHLFSFDVYYISQGVLKAANKQFNNTNNDYEIT
LKDTSEVSLCTDADKDVPTISFDFVKIADLAKCAKDSIVDIIGIVKVCNE
SVQFTSQRTQKEMRKRDLTFVDXSLTEXNVTVWGTMADTFEGSNFPVVAI
KGAKVSDYNGXSLSTLISSTVQMNPDIPQAHKLKGWFESEGSNIETTSLT
QSQLGRSNNMDSGSEGKTIGEVKYDNLGSSTEKPDYYSTQALISMFQKDK
ALYQACNRVSEGRACNKKVVDNNGSYRCEKCNMDNDEFNWRIILNLLIVD
STDSQWVNCFQESAESILGVSAQDLGHSFQHDEEKYNQIFKEANFKTYNF
RIRCKADNYNGESKSRHTIMSLSPVNYEENNNKLIQELKQEGCSSINHL
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mRNA from alignment at LSalAtl2s117:781815..785022+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001089-696936 ID=EMLSAT00000001089-696936|Name=EMLSAT00000001089|organism=Lepeophtheirus salmonis|type=mRNA|length=3208bp|location=Sequence derived from alignment at LSalAtl2s117:781815..785022+ (Lepeophtheirus salmonis)
TGTATATATAAAAAAAAGAAAACTAATGTAAAGTTGGCGCGAGATTATTA
TTTCCCCGAGTTTGGTATTGTATTTATTGAACTTGGAGTGAATATAAAAA
AGGTCGAAAATGCCTGTGAAATTAACGGGAGGAGCGTTGTTGTCGATATG
TCAAGGGGATCGAGTTGAGAATCCTGTGTTGCAGGTAATGAATGCATCTT
TTAATAGCGGGTTTTCTTGATTGACTTAGTAATTGAAACTGAAATGATTG
CAGATTTTGGGGAATAAAAAAATCAACGGCTCATCTTCGGATCGCTATCG
CCTGTTGATCTCGGATGGKGACTATTCCAACTCCTTTGCCATGTTGGCCA
CCCAGATGAACGACAAGATCCACAATGGACAACTGGAGAACTACACGGTC
GTCTCCGTCAAGAAATACGTTTGCAACAACATGCAAGGGAAAAAGGTCAT
CATCCTTCTGGACATCGATATCTCCACTCCAGGGGCGGAAATTGGAGAAA
AACTAGGAAATCCCAGAGCCATTAATCCTGATGGAACCGTCAACGAAAAA
CCATCCTCCTCTGGTGGAAACAGCTCCTCCTCCAACCAAAAGCGTTACGG
AGATGATGCCGGACTCAATGCGCCACCTTCCAAAAAAACACCTCTTGCCC
CACAAAMCCCTCCTCGCTCCAGCATTCTAGMCCCCAGGCCCGTCATTGGA
TCATCAYCCWCTCCCTCCACCAACATCATGCCCATTAACTCTCTCACTCC
CTACCAAAACAAATGGACGATTCAAGGAAGAGTCACGAATAAGTCGGATA
TCCGACGTTGGAGTAATTCACGAGGGGAAGGACATCTCTTTTCCTTTGAC
GTTTTTAGACGCATCTGGCTCCATCAAAATTGCTGNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTTGTTGCCGATAAGTCATTTAAGAATTATAGTGAGTATCATAAGATT
TGGTTGAGTAGAAAGGGTATTGAGTCATTTAATTTTATACGTTCATTTTG
AATTTATAGCTCTTTTAGGTACCAAGATTTGTAAAAAATTAATTTACTTA
GCCTACAAGAGCCAATTGCATGGCCATAATAAGATTTAAGTGTGTTTTTT
TTATAGAATATTTTTTGTAGAAGTCTAAATTATATAATATTTTGATTTTT
ATGACCTCATTATTAAGAGGTTAGGTGGAAAGGGGGATTGGGACTTGTCG
AACGGTTTACTCCTCTCTTTCTAAGGAAGTTTTTCATTCTTGGAGTTGGG
TAGACTTTCCAAAAAAAAATAAAAAATATCCACCTAGAATATCTTCTTTG
TTCGGGGCTGTTAATTTTATTACGAATATTTCTAATTTGCATTGCTTAGA
TATGTTAGTAATTTTCTTGATCTGTATTTATTACTGTTCCAATCTTTCAT
TATGAATGAGGGTGTTTTCCAATTTTTACAAATAAATTGATCTGAGAAAT
AAATTTAAATAGTTTTAATTTCTCTGTTTTTAAATATTAAGATTCAATAA
TTGACTGTTTAAATTCAATTATCAAATCCATTTATTTATAAAAATGTAAA
CACACATGATTCATACTGAAACCTTCCCAACCTTCATTCCGTAAAGTAAA
TATACATTTATGACCATAAAATTAATAATTAAGCATCTCATCCTACGACT
TCCAAATGATCCACTCATTCAAATCCTTTTATTTTTTCACTTTTAGGTCT
ATTATATAAGTCAAGGAGTACTTAAAGCCGCAAATAAGCAGTTCAATAAC
ACGAATAATGACTATGAAATCACTCTTAAAGACACGTCGGAAGTATCTCT
CTGTACTGATGCTGACAAAGACGTTCCCACCATTTCTTTTGACTTTGTTA
AAATTGCGGACTTGGCAAAATGTGCCAAGGATAGTATCGTGGATATTATT
GGTATTGTAAAAGTGTGTAATGAGTCAGTACAGTTTACGAGTCAACGTAC
ACAAAAGGAAATGCGGAAGCGGGATTTGACTTTTGTGGATAKAAGTCTTA
CGGAAGMCAATGTAACCGTATGGGGAACGATGGCTGACACATTTGAGGGA
AGCAATTTCCCTGTGGTAGCTATTAAAGGAGCCAAAGTCTCGGACTACAA
TGGAGMATCTCTAAGCACTTTGATTTCTTCTACAGTTCAGATGAACCCCG
ATATCCCTCAGGCACATAAGTTAAAAGGATGGTTTGAATCTGAAGGCTCT
AATATAGAGACGACGAGTTTGACTCAGTCCCAATTGGGACGCTCCAATAA
CATGGATTCCGGATCAGAAGGTAAAACAATAGGAGAAGTTAAATATGACA
ATCTCGGTTCATCCACGGAGAAGCCTGACTATTACTCTACCCAGGCTCTC
ATTTCCATGTTTCAAAAGGATAAGGCACTCTATCAGGCCTGTAATCGTGT
GTCTGAGGGAAGGGCCTGCAATAAAAAAGTCGTGGACAACAATGGCTCAT
ATCGATGTGAGAAGTGCAATATGGATAACGATGAATTCAATTGGCGCATC
ATTCTCAATTTGCTCATTGTTGATTCCACAGATTCTCAATGGGTCAATTG
TTTTCAAGAGTCTGCTGAAAGTATTTTAGGTGTATCTGCTCAAGATCTTG
GACACTCCTTTCAACATGATGAAGAGAAATACAATCAAATATTCAAAGAA
GCTAATTTCAAAACATATAACTTTAGAATTCGTTGCAAGGCTGATAACTA
TAATGGGGAGTCCAAGTCTCGGCACACCATCATGTCCCTCTCACCCGTCA
ATTATGAAGAAAACAATAATAAGTTAATTCAGGAGCTGAAACAAGAGGGG
GTTGATATCTCCTCTATCYAAAATTCCATGGCTTAAGKCCCGCCTCTCAG
TCTTCTCGACATTTACAATATCATTTCTAATGATCATGAATTAGACATGA
AATGTATATTAAAGTACAATATGTTTCATTTCACCCGTTCTCCCATTAAT
TGGGATTAATGATAATTATTTTTTTTTGATTCAGTGTTCCTCTATAAATC
ATTTATAA
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