EMLSAT00000001416, EMLSAT00000001416-697263 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001416
Unique NameEMLSAT00000001416-697263
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1241supercontigLSalAtl2s1241:8830..11413 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001416 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001416EMLSAG00000001416-684182Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000006165EMLSAE00000006165-715093Lepeophtheirus salmonisexon
EMLSAE00000006166EMLSAE00000006166-715094Lepeophtheirus salmonisexon
EMLSAE00000006167EMLSAE00000006167-715095Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768816auto768816Lepeophtheirus salmonispolypeptide
EMLSAP00000001416EMLSAP00000001416Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001416

>EMLSAP00000001416 ID=EMLSAP00000001416|Name=EMLSAP00000001416|organism=Lepeophtheirus salmonis|type=polypeptide|length=109bp
MKSFVALSALLAVAISAPADLYRPAPYHPAPAPYHAAPXYKEEPAXYQYQ
YAVSDEYAGLNFGADEARDGYSTQGKYSVALPDGRIQTVSYNVADAYSGY
VMKLGIKDT
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mRNA from alignment at LSalAtl2s1241:8830..11413+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001416-697263 ID=EMLSAT00000001416-697263|Name=EMLSAT00000001416|organism=Lepeophtheirus salmonis|type=mRNA|length=2584bp|location=Sequence derived from alignment at LSalAtl2s1241:8830..11413+ (Lepeophtheirus salmonis)
TTTAACTCCAATTCAATCAACATGAAGGTAAGTAGCTAATAGAAATCAAA
TCCTCAAGCATTATTTAACATATTTTGTTTTCTTCTTTACAGTCCTTCGT
CGCATTGTCTGCTCTTTTGGCTGTTGCCATCTCTGCTCCTGCTGACCTCT
ACAGACCAGCTCCCTACCACCCAGCACCGGCACCATACCACGCAGCRCCT
RCCTACAAGGAAGARCCCGCCSCCTACCAATACCAATATGCTGTCAGTGA
TGAATATGCTGGACTCAACTTTGGAGCTGATGAGGCCCGTGATGGATACT
CCACCCAAGGAAAGTACTCTGTTGCCCTTCCCGACGGTCGCATCCAAACT
GTGTCCTACAACGTTGCTGATGCTTACTCTGGTTATGTTGCTGKCGTCKC
CTACTCTGGAGAGGCTAAATASGAGCCATACCACCCTGCTCCCGCTCCTT
ACAAGTCTGCTCCCGTCTACCATGCTGCCCCAGCTCCCTACAAGCCAGCT
CCCGTCTACCACCCTGCTCCCGTTTACCACGCTTAGGCTTCATTGTTATA
ATATTTATTAGTTTATTTATTTATTTTTTATTCTAAATAAATCTATTTAA
AACTTATTTTACTATAGTTCAATCATCAGTTAGTCAATATAAGTTGTTTT
TCTTTAAGATAAATCATTCGTAGATATTTATTGTGGGAATAAATTGCATT
AAACACACATATCAAAATCAAAGGTATTCAACTATTTTTTAAGAAAATTA
AATCAACATATTTGCTAGGTTGTCAAAATTAAACCTTTCTTTCAAAATAT
TTACATGATTAGATTTTATAATTTTAGTTTGTTTTGTCACTTTGAACCTG
CCTGTTTTTGTATTTAATTGATACTGGATTTTATTTTGTTCCTTTTTTTC
AAACTTATTACTCAACCATAACATTACTAATTTTACACCTGGGCCTCTAT
TTAGAACAAAATGCTTTGATAACATTGTTTTTTTTATTAAAATTTACAAA
AAACGGTCCCTGCTCCAAACCCCTTACCTACCCCAGGTGTTCACTAAAGT
TCACATTTCATTTCTTCAGCAAATCTAAATATTTGAAATTACTGTTGTAT
CGGTCCTTATTTTTTTCGCCATGTCTAGTGTTAGAACCTGTCTGGCAAAT
GTCTGACATTTTTCAAATTTTCTGGGTTAAAATAATAATGTTTGGTTTTT
TAAAGTTTTAAATGTAATGAACAAAAATAAGACAATACATAATTTAAAAC
TGTTTAGAAAACCAGGGACATATATAATTCAAATTTTTCATTAATGTCTT
CAACTCTTCTTTTTGTCCCCAACTTATCCCCAATTATTAGCCATAAGACA
CACAAAACTGCAAAGTCCAGAGAATTAAGATAATTTTTATTAGTAAATAA
TTTAGTGTGAAGGTAATGTAGGTAATATAAAGGGGAATAAGTTTTTATCA
ATAACTTAGTTGTTGCATACTTAGAACCATAGAGTGCCTCCAATAAAATT
TAATTTATATGCGAGTAAAATAGCCCATTAAAGTAAATGCAACTATTTGT
TGTTGTAAAAATGTACTTTCTTATAATTATTTGTAAGTTTTGCAATCTTA
ATTCTTAATTTACCTGTCTTTAAAAAATGAGGTTAATTTCGTTAGATATT
CAAAATATTTGATTCCAATATTCCAACTGTAGTATCTAGTACCTTTTTGA
ATATTTCAAAACTGTTATAGTTCTCTTGTTCGGTCATGATATGTTTATTT
AAGCTATGCATAATTTCAATCAATCAATTATTGGATAATTATTCGACAGT
GTGGAATAATTTGCTAAGAATTCGCTAACAAGTATGGGGATCGATAAAGT
GGGATTGAGATCGGTGGCGAAAAATCCATCCATCTATTCAAGAGAAAGAT
GACTGCAATATCGCATCGTTATTTGTTGATTTTGTTATTCTTTTTGCCAA
AAATACAAACGATTTTAATGACAATTAATAATTTTGGGATCTTTCCAACT
AGCCATTCAGTGTTTATTCCTCTAAGGGCATCTTTGTCCTTGGAGTATTA
ATTCAGAGAAGAGAGTTGACTATGGATATCCATGGATTGAGATGATTTTT
ACGATATCGACAAGACTAGATCATTATGGATGAAGTTCATTGTTTCAAAT
AAGAAACGAAAAAACATCAAACTGCACATAATAAGTTGAAAACAATCAAT
CTACCACTTTTGATAAATATCAAAGGCACGAACTGAACGTTGGATGATTA
TAAAGCTTTATAAGTGGTTTCATAATATTGGATGAATAATTTATCAAATA
AATGACTACAATCTAATAACAATTATAATACTTGTAAATTGACCTATTTT
ATATCTATTATTGATTTGTTCTACTAATGTAACTTGAAGCATTAAGCCCA
TTTGACTATTCTAACATAAGTATGTAGTTATTTGAATTAAAAAAAGATGT
GTTAACTCTTTAAAAAACTCAAATTGAAGAGTATATAAAGAAGTCAGAAT
AGGTAACTAGTACTTCTTATTATAATTTTGTTTATTTTTTGAATTAATAC
TTAGGTTATGAAATTGGGAATAAAAGATACATAA
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