EMLSAT00000002785, EMLSAT00000002785-698632 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000002785
Unique NameEMLSAT00000002785-698632
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s160supercontigLSalAtl2s160:520470..523461 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000002785 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000002785EMLSAG00000002785-685551Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000012318EMLSAE00000012318-721246Lepeophtheirus salmonisexon
EMLSAE00000012319EMLSAE00000012319-721247Lepeophtheirus salmonisexon
EMLSAE00000012320EMLSAE00000012320-721248Lepeophtheirus salmonisexon
EMLSAE00000012321EMLSAE00000012321-721249Lepeophtheirus salmonisexon
EMLSAE00000012322EMLSAE00000012322-721250Lepeophtheirus salmonisexon
EMLSAE00000012323EMLSAE00000012323-721251Lepeophtheirus salmonisexon
EMLSAE00000012324EMLSAE00000012324-721252Lepeophtheirus salmonisexon
EMLSAE00000012325EMLSAE00000012325-721253Lepeophtheirus salmonisexon
EMLSAE00000012326EMLSAE00000012326-721254Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778348auto778348Lepeophtheirus salmonispolypeptide
EMLSAP00000002785EMLSAP00000002785Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000002785

>EMLSAP00000002785 ID=EMLSAP00000002785|Name=EMLSAP00000002785|organism=Lepeophtheirus salmonis|type=polypeptide|length=422bp
MQKSSRKINYICGEGCKGPQNEFQCIGHGDCLPKQLRCNGIYDCRDGSDE
LLCDKEGFEKETCQELQCPNGQCIPSDRKCARKIDCPESYDELDCHSTSL
HCTDNEFYFVKDARCIASSFRCDVCDGVEDCPDLSDEFNXLKATTNGEIQ
IRNNNDTWSTICFNKDSSLEFAKASCQQLGYASAKFESTTLENKESSNYK
GFSSNVSLTDIKKIDAKILDDIPACDSNPKTICEEFECSKRTLTERQIKE
LKAQGTINITSLTSENELWPSLAYLFNRFSNIFYNRSMDPLEWVAFAGPA
NGQTDQSKTQIKIVKRIVSNPSVRFQQGYYTDDLALIELNDPLIFNDHVQ
ATCLEESTLEDNICFVAGWADVNKEGVSFIQYLDRIPLPMMSQEECNSQS
HYNKLLNGNSLCTSSKHQNIPV
back to top

mRNA from alignment at LSalAtl2s160:520470..523461+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000002785-698632 ID=EMLSAT00000002785-698632|Name=EMLSAT00000002785|organism=Lepeophtheirus salmonis|type=mRNA|length=2992bp|location=Sequence derived from alignment at LSalAtl2s160:520470..523461+ (Lepeophtheirus salmonis)
ATGCAAAAAAGCTCAAGAAAAATAAATTATATCTGTGGGGAGGGCTGTAA
GGGCCCTCAAAATGAATTCCAGTGTATTGGGCATGGTGATTGTCTTCCAA
AACAGTTGAGATGTAATGGTATTTATGACTGCAGGGACGGATCTGATGAG
CTTTTATGTGACAAAGAAGGTGAGTTTAAGTTAAAAATTTTAGTATSAAT
ATTATTTATCATATAAAAATAAATCTAATGTCGAATGTTATTCTGCATTT
AGGGTTTGAAAAAGAAACATGTCAAGAGTTGCAATGCCCTAATGGTCAAT
GTATTCCTTCTGATCGGAAATGCGCTAGAAAAATAGATTGCCCTGAATCT
TATGATGAATTAGACTGTCATTCAACTAGTTTACATTGTACAGATAATGA
ATTTTATTTTGTAAAAGATGCACGGTGTATTGCATCAAGTTTCCGATGTG
ATGGTACTTCAGATTGTGTAAGAGAGGATGAAGATGAACGAAATTATAAT
TGTGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAA
AAGTTTGTGATGGAGTTGAAGATTGTCCAGATTTATCTGACGAGTTTAAC
TRTTTGAAAGCCACAACAAATGGAGAAATACAAATTAGGTATGTTTTTAC
TCTGATAGTTTTTACTTCATTTTTAAACAAAATGTTATCGATTTTAGGAA
CAATAATGATACTTGGTCAACCATTTGTTTTAATAAAGACTCATCTCTCG
AGTTTGCAAAAGCTTCTTGTCAGCAATTAGGATACGCTTCTGCTAAATTT
GAAAGTACTACCTTAGAAAATAAAGAATCATCTAACTACAAGGGTTTCAG
CTCCAATGTATCTCTAACCGATATTAAAAAAATTGATGCAAAGATCTTAG
ATGACATACCAGCTTGTGACAGCAATCCCAAGACAATTTGTGAGGAATTT
GGTATGTTTATTATCCCATCTACTTTTTCTTTAATTATTTGTGAATATAT
TTATTTATAGAATGTTCAAAACGAACACTTACTGAGAGACAAATAAAGGA
ATTGAAAGCCCAAGGCACCATCAACATTACCTCTCTAACCTCAGAGAATG
AACTTTGGCCTTCTTTAGCGTATCTATTTAATGTAAAAAGGAAAACAAGT
TGTGTTGTTACAATTTTAAATCCCAAGTGGTTGATTACMTCGCATNGATG
TATGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTGAGAGGTTTGTAACCATATTCATTT
ATTTCAAAAGAGGTTTTCTAATATTTTTTATAATAGATCAATGGATCCTT
TGGAATGGGTAGCCTTTGCTGGCCCTGCCAATGGACAAACGGATCAATCA
AAAACTCAAATTAAAATAGTAAAGAGAATAGTTTCAAATCCCTCAGTACG
ATTCCAGCAAGGATATTATACTGACGATTTGGCTCTTATTGAACTAAATG
ATCCTTTGATCTTCAACGATCATGTTCAAGCCACTTGTTTGGAAGAGTCT
ACACTGGAAGATAACATTTGCTTTGTAGCAGGATGGGCAGATGTAAATAA
GGAGGGTAAGTCAAGCAGTAGCTCATTGATTAGTAATTATACTAATATTT
GATGATTTTTTTACATATTACATTCATAGGTGTAAGCTTTATACAATACC
TCGACAGAATACCCCTTCCAATGATGTCGCAAGAGGAATGTAATTCACAG
TCACATTATAACAAATTACTAAATGGTAATTCTTTGTGTACTTCCTCTAA
ACACCAAAATATCCCNGTGTAGAGTAAGTTTAATAGCTTTCAAATATAGC
CAAGGATGTGAAATATGCAATCTTCTTWCATTTTTAGATGGACAGTGGAG
CGCCACTTTTGTGCTACCAGGGTGATAGATGGAGACTTCGTGGTATTTTA
AGTAGGGAAGGGGAGTGCCTTCCGTCAACTCTTCCAGATATTTTCACATC
TGTTGATTCATGGAAATCATGGATTAGTAATTTTATTGGAGAAAACGAAT
CATAATCGTAATAAATATTTATCCAATATGAAAAAAGACATTTGACATAA
TGACTTGCAAAAATGAAGATAACCCCAAAAAAAATAATGACATCCTATGT
CAAGGCTGTGATATGTTGTTATTTTTTTTTTTTTTCATCGNTTTTTGGGT
TGAATAAATCTCGTCCATCATTTGTGATATTGTTTTCCTGCTCTTCAAGC
CTTTCATTCGTGCAATTAAGTAACTTGTCGTGGATGTCCTGTTTCTTCCT
TAATCACACTGGGTACGGTCCTAAGATATCTGAGAAACAGAAGTGACAGA
GCATTGGAGGMATATATTTGCTCATAGAAGCCTGGACTGACATTGTGCCA
TATCAAAGCAGTCGAAAGGAGTCCAGAAGAATGTCTAACCATTTAGGTTG
TTTGAAGATAATTTATAAATGAGATGTTACAGGATTGAATCTGGTCCATT
CCAGATGAGTTAAAAATTAAGACGTTCTTCATAAACTCACAACTGCTCAG
GGCATCCTGCTGGAATTTACGTAAAATATATAAAGATATATGTAGGTGTA
TATAAATACATAGACCTGAGCTTTTAATCTCCTTGAAATGATTTTTTTAA
AAGAATTAAATCAATATAATCAAATTTGAATTCATTTATGCAAACAAACG
TACCCACAACTATATACATACATAACTGTTAGTAAATATATTTAAATAAA
TTTTAAATAATAAAATTTTTTAGTGCTTTTTTAAAGTGCAATTTCAATTC
GTTCTTTTAATAATAAACATAGGCATTATTTTTATTATTACTATTGCTCT
GTAATATTATTTAGATTCCTTTTTTTTTTAGTATTTATATTGTAATTTCA
TGGCTTATTTATGTCTCAATTTCCCAAATTAAAAATATACTC
back to top
Add to Basket