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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s197 | supercontig | LSalAtl2s197:49356..53594 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000003611 >EMLSAP00000003611 ID=EMLSAP00000003611|Name=EMLSAP00000003611|organism=Lepeophtheirus salmonis|type=polypeptide|length=1412bp
MILFLLSPLELLYNKNKCSSPKTLFDPFSIFKAAIPCILIVLSILEGIFI
QDFDTLSDFLKIFLMITSFGFSLFLHVDGVIRRCSKTSTLQFFFYFLLLI
SSCLSIRRIESHPEDLGRDYLWLICLQTGCVLVATVLYSISETVLKQKSK
KNKENPKKDASFFSLLFYEWITPLLWKGFKKPITEDDLWNLNKDLTCGET
SRRLDQYYFKSGNKKIGIPLMKAFGFEFVIGSTIKFFSDILSMVLPQIMK
LMINHADSEFEMKERSWKGYLYPSMLIIVSFLQSVLLAKYFEIVFLVSMR
IRASLTSLVYRKCLKLSNSSRKNKSVGEIVNIMSVDVSRIADLMPFLTLL
WSSPFQIVVSVIFMYNELGWAIIGGTGILLITIPVNAILSYFGKKFQMKQ
MKAKDNRTKILNEVLGGIRILKLYAWEPSYINKIEGIRGVEIGILKKAAW
LTSFMGFIWSSTPFIVALASFATFVMVDDRNILTAEKAFVTQSYINKMKM
PMAXFPFVIVXAISATVSLKRINQLLTSDELQKDAVERVPMKINQKIDQG
DAIVIRDGNFKWSTEDSENTLSNINLRIKHGSLTAIVGTVGSGKSSLISA
ILGEMVKKSGKVRIKGQIAYVPQESWMQNTSLKNNILFGKPYDEEWYNQV
LEYCCLTYDLSLLPAGDETEIGERGINLSGGQRQRISLARAIYSDADVYI
FDNPLSALDSQVGKSVFNNVLNNNTGIIKDKTRLLVTHGISYLPHVHHIA
VMLKGEIIHEGTYQELLEKKIIQTIEEEEEQEKDGVQENNINNYNNIPKT
FDATVNNLEKAAIIQKEGLETGRVSWSVYKYYIQSIGFLGAFLIIFNQML
NQLFGFGSSIWLEAWTQEDYGNATIPKYRDLYLGVYGALGIGQAVTIFLL
SLSVAMFTLKASKVIHNQTYDRIMRAPISFFDSTPQGRILNRFSKDISIC
DNILGSNIRQWLXCLFXFLGIVILIVSVLPLFLLFALPTSLVFILIQNIY
VASSRQLKRLQSVTRSPIYSHFSESLNGLSSIRAYGAQSKFILESINKID
TNQRCNYPSIIANRWLAMRLETIGNLCIFGXAILTMTNPELVGPGKVGLV
ISYALILTQNLNWLXRQTSEIETNIVAVERLKEYAGLDIEKEWRLHKDTS
YNWPSQGKVEFKNYSLRYKANSDLVLKKINFTIFGGERVGIVGRTGAGKS
SLSVALFRIVEAANGQILIDGKDISTLGLHDLRESLTVIPQEPLLFSGTL
RSNLDPENAFSDHDIWNTLGSVHLKEYIRDLKDGLNHSISEGGLNLSSGQ
RQLMCLARALLRSCKILILDEATAAVDWETDEKIQETIRCYFPSCTILTI
AHRLKTIIDYDKILVLDKGTVIEFGSPNELYMNSDSVFHSMINAAGITLT
ASPKNEIESTSL back to topmRNA from alignment at LSalAtl2s197:49356..53594- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000003611-699458 ID=EMLSAT00000003611-699458|Name=EMLSAT00000003611|organism=Lepeophtheirus salmonis|type=mRNA|length=4239bp|location=Sequence derived from alignment at LSalAtl2s197:49356..53594- (Lepeophtheirus salmonis)
ATGATACTATTTCTGCTTTCACCTCTTGAACTCCTATACAACAAAAATAA
GTGCAGTTCACCCAAGACTCTCTTTGATCCATTTTCAATTTTCAAAGCTG
CAATACCCTGTATTCTCATTGTACTTAGCATCCTTGAAGGCATTTTCATC
CAGGATTTTGATACCTTATCCGACTTTTTGAAGATTTTCTTAATGATTAC
CTCATTTGGATTTTCCCTCTTTCTTCATGTCGATGGTGTGATTCGTCGAT
GTTCAAAGACATCAACACTTCAATTCTTCTTTTATTTTCTACTTCTCATC
TCCTCATGTCTGAGTATACGAAGGATAGAATCACATCCAGAGGACCTTGG
ACGAGATTACCTATGGTTAATTTGTTTGCAAACAGGTTGTGTCCTGGTCG
CTACAGTTCTCTATTCTATCTCTGAAACAGTATTGAAGCAAAAGTCTAAA
AAAAACAAGGAAAATCCGAAAAAAGATGCAAGTTTCTTTTCTCTATTATT
TTATGAATGGATCACACCACTTCTTTGGAAAGGATTTAAAAAGCCCATCA
CTGAGGATGATTTATGGAATTTGAACAAAGATTTGACTTGTGGAGAAACG
AGTCGTAGATTAGATCAATACTATTTTAAATCTGGAAACAAAAAAATTGG
AATTCCTTTGATGAAGGCCTTTGGATTTGAATTCGTGATAGGCTCGACTA
TTAAGTTTTTCTCTGATATTTTGAGCATGGTTCTTCCTCAAATCATGAAA
CTTATGATCAATCATGCTGATAGTGAATTTGAAATGAAGGAAAGGTCATG
GAAGGGATACTTATATCCTAGTATGCTCATTATAGTGTCATTTCTCCAAA
GTGTACTACTAGCAAAGTATTTTGAAATTGTATTTTTAGTAAGTATGAGA
ATCCGAGCGTCTCTCACGTCCCTTGTGTACAGGAAATGTCTTAAATTATC
AAATTCATCCAGAAAAAATAAGAGTGTTGGTGAAATTGTCAACATAATGT
CTGTAGATGTGTCTCGAATTGCAGATCTTATGCCTTTTTTGACACTCCTT
TGGTCTTCTCCCTTTCAAATTGTTGTGAGCGTAATTTTTATGTATAACGA
ACTAGGTTGGGCCATTATAGGAGGTACTGGGATCCTTCTCATCACTATTC
CTGTGAATGCTATTTTGAGTTATTTCGGTAAAAAGTTCCAAATGAAGCAA
ATGAAGGCAAAGGATAATAGGACCAAGATACTAAACGAGGTTTTAGGTGG
AATACGTATTCTCAAACTCTATGCATGGGAGCCATCGTACATTAACAAAA
TTGAAGGAATAAGAGGAGTAGAAATTGGAATTTTGAAGAAAGCAGCATGG
TTAACTTCTTTTATGGGATTTATTTGGTCATCCACTCCATTCATTGTAGC
GCTTGCATCTTTTGCAACCTTTGTCATGGTTGATGATAGAAATATATTAA
CAGCAGAAAAGGCATTTGTGACTCAGTCTTACATCAACAAAATGAAGATG
CCAATGGCAGSTTTTCCWTTCGTGATYGTGSCAGCCATATCTGCTACTGT
TTCCTTAAAGAGGATCAACCAGCTCCTTACTTCTGATGAACTCCAAAAAG
ATGCCGTTGAGCGTGTTCCAATGAAAATAAATCAAAAGATAGATCAAGGC
GATGCCATTGTCATTCGTGATGGAAATTTTAAGTGGAGCACTGAAGATTC
AGAAAATACACTCTCAAACATCAATCTTAGAATAAAACATGGCAGCCTCA
CTGCGATTGTTGGTACTGTGGGAAGTGGGAAATCATCTTTGATTTCCGCA
ATCCTTGGAGAAATGGTTAAAAAGAGTGGAAAAGTGAGAATAAAAGGACA
GATTGCCTACGTTCCTCAAGAGTCTTGGATGCAAAACACTTCCCTAAAAA
ACAATATCCTCTTTGGAAAGCCTTATGATGAAGAGTGGTACAATCAAGTT
CTCGAGTATTGTTGCTTAACTTATGATTTGTCTCTGTTGCCAGCAGGAGA
TGAAACAGAAATTGGGGAACGGGGGATAAACTTATCTGGTGGACAGAGAC
AAAGAATATCCTTGGCAAGAGCAATTTACAGTGATGCTGATGTCTATATA
TTTGATAATCCTCTTTCAGCTCTTGACTCTCAAGTGGGTAAAAGTGTGTT
TAATAATGTTCTCAACAATAACACAGGAATTATCAAAGATAAAACAAGAC
TTCTTGTCACTCATGGTATTTCTTATCTACCTCATGTGCATCATATCGCT
GTTATGTTAAAAGGCGAGATCATTCACGAAGGAACATATCAAGAACTGTT
AGAGAAAAAAATTATTCAAACCATTGAAGAAGAGGAAGAACAAGAAAAGG
ACGGGGTACAAGAAAATAATATAAACAATTATAACAATATTCCTAAGACT
TTTGATGCTACCGTCAACAATCTAGAAAAAGCGGCTATAATACAGAAGGA
AGGTCTTGAAACAGGTCGGGTCTCCTGGTCAGTATATAAGTATTATATTC
AGAGCATTGGGTTCTTAGGTGCTTTTCTAATAATTTTTAATCAGATGCTT
AATCAACTATTCGGGTTTGGATCATCAATATGGCTAGAAGCCTGGACTCA
AGAGGATTATGGAAACGCTACTATTCCTAAATACAGAGACCTCTATTTGG
GAGTTTATGGTGCTCTAGGTATTGGTCAAGCTGTAACTATATTTTTGCTT
TCGCTATCTGTCGCCATGTTTACACTCAAAGCTTCTAAAGTTATTCATAA
TCAAACGTACGATCGAATTATGCGAGCACCAATTAGTTTTTTTGACTCAA
CACCACAAGGAAGAATATTGAATAGGTTTTCTAAGGACATAAGCATATGT
GATAATATCCTCGGCTCAAACATACGTCAATGGCTTMCATGCCTCTTTWG
TTTTTTAGGAATTGTAATTCTGATTGTGAGTGTTTTACCTCTTTTCTTAC
TGTTTGCACTTCCCACTTCTCTGGTATTCATTCTCATACAAAATATATAT
GTTGCCTCTTCAAGACAGCTTAAAAGATTGCAATCTGTGACACGTTCTCC
TATTTACTCTCATTTTTCTGAGTCGTTGAATGGGCTCTCTTCCATTCGTG
CATATGGTGCCCAGAGTAAATTTATACTTGAGTCTATCAATAAAATTGAT
ACAAATCAAAGATGCAATTATCCAAGTATCATTGCAAATCGCTGGCTCGC
AATGAGGCTAGAGACAATTGGAAATCTCTGTATTTTTGGASCTGCCATTT
TAACTATGACAAATCCTGAATTAGTTGGACCAGGAAAGGTTGGATTAGTT
ATAAGTTATGCTCTTATCCTGACCCAAAATTTAAATTGGCTTMTAAGACA
AACTTCTGAGATAGAAACAAATATCGTTGCCGTTGAAAGATTAAAAGAAT
ATGCTGGATTGGACATAGAAAAGGAGTGGCGGCTGCATAAGGATACTTCT
TACAATTGGCCAAGTCAAGGAAAAGTTGAGTTTAAAAACTACTCATTGCG
TTATAAAGCAAATTCCGATTTAGTTCTCAAAAAAATTAACTTTACAATAT
TTGGAGGTGAAAGAGTAGGAATAGTAGGACGAACAGGAGCTGGGAAATCA
TCTTTGAGTGTAGCTTTATTTAGAATTGTGGAAGCAGCAAATGGTCAAAT
ACTCATTGATGGAAAAGATATTTCAACATTAGGACTTCACGACCTTAGGG
AATCGTTGACTGTAATACCCCAAGAACCCCTTCTTTTTAGTGGAACACTT
AGAAGCAATTTGGATCCCGAAAATGCGTTTTCTGATCACGACATTTGGAA
TACACTTGGTTCCGTTCATTTGAAAGAATATATACGAGATTTGAAGGATG
GATTAAATCATTCCATTTCTGAAGGAGGACTCAATTTAAGTTCTGGACAG
CGACAACTCATGTGTTTAGCAAGAGCTTTATTAAGATCGTGCAAGATTCT
CATCCTTGATGAGGCAACTGCAGCAGTGGATTGGGAAACTGACGAGAAAA
TTCAAGAAACAATTCGTTGCTATTTTCCATCATGTACTATTTTAACGATT
GCTCATCGCTTAAAGACAATCATTGACTATGATAAAATCCTGGTATTGGA
TAAGGGGACTGTCATAGAATTTGGATCACCTAATGAATTGTATATGAATA
GCGATTCTGTTTTTCATAGTATGATTAATGCTGCTGGCATCACTCTTACT
GCATCCCCAAAGAATGAAATTGAATCCACTTCATTATAA back to top
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