EMLSAT00000006399, EMLSAT00000006399-702246 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006399
Unique NameEMLSAT00000006399-702246
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s350supercontigLSalAtl2s350:505101..507396 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006399 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006399EMLSAG00000006399-689165Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000027959EMLSAE00000027959-736887Lepeophtheirus salmonisexon
EMLSAE00000027960EMLSAE00000027960-736888Lepeophtheirus salmonisexon
EMLSAE00000027961EMLSAE00000027961-736889Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778249auto778249Lepeophtheirus salmonispolypeptide
EMLSAP00000006399EMLSAP00000006399Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006399

>EMLSAP00000006399 ID=EMLSAP00000006399|Name=EMLSAP00000006399|organism=Lepeophtheirus salmonis|type=polypeptide|length=714bp
MAGKRKNTRQDYSPRKNTGKKISGSNQILGVIIVVVIGIGLQQIYSGGKI
KTSSGESRQQPTLRPVQENSWEAMGQDSDSKSDKPWVKKFPGSFKKRVWL
STHEEHPNPNIRDLPEGSLGKWSSENPPGHMGAGVELGFMSKKAKDLREK
MFKQHYFDEFISELIPLDRQLPDWRGQWCKDHYDEGIETLEPTSIIICFH
NEAMSTLLRTVHTVINSTPRSLIKEILLLDDNSSLEHLGDKLDDYVDKNF
NGIARVIHLKKRHGLMRCRMVGIKESKAPILTFLDSHFXVHTVINSTPRS
LIKEILLLDDNSSLEHLGDKLDDYVDKNFNGIARVIHLKKRHGLMRCRMV
GIKESKAPILTFLDSHIEASKGWLEPLLHSIKNNPQLITSPVIDXINDTT
FYYTFIYKDLYGLMNWKLDFEWRELSEQEIAKKENIWAPHKNPIMAGGLF
SIRKDWFETLGFYDEGMSVWGGENYELSFKAWMCGGTIEISPCSRVGHVF
RTHSPYRVTPDDINKNGIRVAKVWMDEFQYLFYERLGAFNKKGEERLISY
GDVSKRQELRDKLGCNSFKWFLDNIGKSELPYHSLIGSGEIKNPSTGVCM
DKNDRMEYMGHPVDLIPCHNLGGNQYWMMNRNRFILRDYTCLGIQGSTVI
VAHCQMSGTWNYDPNKKILRHSSGRCLTAGSGVATVDKCNPSDPNQQWEF
TRYNKLGLDYENLF
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mRNA from alignment at LSalAtl2s350:505101..507396-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006399-702246 ID=EMLSAT00000006399-702246|Name=EMLSAT00000006399|organism=Lepeophtheirus salmonis|type=mRNA|length=2296bp|location=Sequence derived from alignment at LSalAtl2s350:505101..507396- (Lepeophtheirus salmonis)
ATGGCTGGAAAACGAAAGAACACACGTCAAGACTATAGCCCCAGAAAAAA
CACTGGCAAGAAAATATCTGGATCAAACCAAATCCTTGGTGTTATTATCG
TGGTGGTAATTGGGATTGGACTGCAGCAAATTTATTCTGGTGGAAAGATA
AAGACATCTTCTGGAGAATCACGTCAACAGCCCACTCTACGTCCAGTTCA
AGAAAATTCATGGGAAGCAATGGGACAGGACTCTGATAGCAAGTCTGATA
AACCATGGGTTAAAAAATTTCCAGGCTCTTTCAAAAAAAGAGTCTGGCTT
TCTACCCATGAAGAGCATCCTAATCCAAATATTCGAGATTTACCTGAAGG
CTCTCTAGGGAAATGGTCGTCTGAAAATCCACCAGGTCATATGGGAGCCG
GCGTGGAATTGGGTTTTATGAGCAAAAAAGCCAAAGATCTCCGTGAAAAA
ATGTTTAAGCAGCACTATTTTGACGAATTCATTAGTGAATTGATTCCTTT
GGATAGACAACTTCCAGATTGGAGAGGTCAATGGTGTAAAGACCATTATG
ATGAAGGAATTGAAACTCTCGAGCCTACTTCAATTATCATATGCTTTCAC
AATGAGGCAATGTCCACCCTATTAAGAACCGTACATACTGTAATTAACTC
AACTCCTAGATCTTTGATTAAAGAAATTTTGCTGTTGGATGATAATTCCT
CATTGGAGCATTTAGGTGATAAATTGGACGACTATGTGGATAAAAATTTC
AATGGGATTGCACGAGTTATTCATCTTAAAAAGAGACATGGGTTAATGAG
GTGTAGAATGGTTGGTATCAAAGAATCCAAAGCTCCAATTTTAACCTTTT
TAGATTCACACTTTNCCGTACATACTGTAATTAACTCAACTCCTAGATCT
TTGATTAAAGAAATTTTGCTGTTGGATGATAATTCCTCATTGGAGCATTT
AGGTGATAAATTGGACGACTATGTGGATAAAAATTTCAATGGGATTGCAC
GAGTTATTCATCTTAAAAAGAGACATGGGTTAATGAGGTGTAGAATGGTT
GGTATCAAAGAATCCAAAGCTCCAATTTTAACCTTTTTAGATTCACATAT
TGAAGCCTCAAAGGGTTGGCTAGAACCTCTCCTTCACAGTATTAAAAACA
ATCCCCAGCTCATTACGAGTCCTGTCATTGATTRCATCAATGACACTACC
TTTTATTACACATTTATTTACAAGGATCTCTATGGATTAATGAATTGGAA
ACTAGATTTTGAGTGGAGAGAATTGTCAGAACAGGAGATAGCAAAGAAAG
AAAATATTTGGGCTCCTCATAAAAATCCTATAATGGCTGGAGGATTATTC
AGTATACGCAAGGACTGGTTTGAAACTCTTGGATTTTATGATGAAGGTAA
CAGAAATTCGAGAATAAGAAAGTTTTAGGGTATCATCTATATAATATATA
AACCCTTTATTCATTTTTTCCTAGGTATGTCAGTTTGGGGTGGCGAAAAC
TATGAACTCAGTTTTAAGGCATGGATGTGTGGGGGAACCATAGAGATTTC
CCCTTGCTCACGAGTTGGTCATGTCTTCCGAACACATTCTCCTTATCGTG
TGACTCCTGACGACATTAACAAAAATGGAATAAGAGTAGCCAAAGTGTGG
ATGGATGAATTCCAATATTTGTTTTACGAAAGGTGATACAACACCCAATT
GTACCTCACATATATTATATATATTTTACTAATTTATAATTATTCTCCTC
TCAAGACTTGGTGCTTTTAATAAGAAAGGAGAGGAACGACTCATAAGCTA
TGGAGATGTTTCGAAAAGACAGGAATTAAGAGACAAACTGGGTTGTAATT
CCTTTAAATGGTTCTTAGATAACATTGGCAAGTCTGAGCTCCCCTACCAC
TCTTTGATAGGCTCCGGAGAAATTAAGAATCCTTCCACCGGTGTTTGTAT
GGACAAAAATGATAGAATGGAGTACATGGGGCATCCCGTTGATCTTATTC
CCTGTCACAACTTAGGTGGTAATCAGTATTGGATGATGAACCGCAATCGC
TTTATACTAAGAGACTATACTTGCTTAGGAATTCAGGGTTCTACTGTTAT
TGTTGCCCATTGTCAAATGTCAGGGACTTGGAATTATGATCCGAATAAAA
AGATATTGCGGCATTCTTCTGGGCGCTGCTTGACCGCTGGAAGCGGCGTA
GCAACAGTTGATAAGTGTAATCCATCAGATCCAAATCAGCAATGGGAATT
TACTAGGTATAATAAACTAGGGCTGGATTATGAAAATTTGTTCTAG
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