EMLSAT00000008715, EMLSAT00000008715-704562 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000008715
Unique Name	EMLSAT00000008715-704562
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s53	supercontig	LSalAtl2s53:791859..799626 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000008715 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000008715	EMLSAG00000008715-691481	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000038687	EMLSAE00000038687-747615	Lepeophtheirus salmonis	exon
EMLSAE00000038688	EMLSAE00000038688-747616	Lepeophtheirus salmonis	exon
EMLSAE00000038689	EMLSAE00000038689-747617	Lepeophtheirus salmonis	exon
EMLSAE00000038690	EMLSAE00000038690-747618	Lepeophtheirus salmonis	exon
EMLSAE00000038691	EMLSAE00000038691-747619	Lepeophtheirus salmonis	exon
EMLSAE00000038692	EMLSAE00000038692-747620	Lepeophtheirus salmonis	exon
EMLSAE00000038693	EMLSAE00000038693-747621	Lepeophtheirus salmonis	exon
EMLSAE00000038694	EMLSAE00000038694-747622	Lepeophtheirus salmonis	exon
EMLSAE00000038695	EMLSAE00000038695-747623	Lepeophtheirus salmonis	exon
EMLSAE00000038696	EMLSAE00000038696-747624	Lepeophtheirus salmonis	exon
EMLSAE00000038697	EMLSAE00000038697-747625	Lepeophtheirus salmonis	exon
EMLSAE00000038698	EMLSAE00000038698-747626	Lepeophtheirus salmonis	exon
EMLSAE00000038699	EMLSAE00000038699-747627	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto779733	auto779733	Lepeophtheirus salmonis	polypeptide
EMLSAP00000008715	EMLSAP00000008715	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s53:791859..799626+

protein sequence of EMLSAP00000008715

>EMLSAP00000008715 ID=EMLSAP00000008715|Name=EMLSAP00000008715|organism=Lepeophtheirus salmonis|type=polypeptide|length=1762bp
MFAPNGQNNSHTFRTKCPKRKEDLSSLMTQSPKKVKDLCSLLQEAPDFQS
QINCLQKWKXDLEXVAXLFFLLPLKSSLRRSIASKIKNYADSEEILTSYF
LKELKKYDGSAFISNVIKCCDDNNAILRQLPTFLSIEPFMKNITQTLSAN
NESELSEVLRALSYARVNAQNSIFETHPDLKILLHKIVQRQCFSTDTRGK
SAKILLSEEILCQPGYDVLLDIISLIKNTSSPYFCTNIESELIYYYGIVT
SSSFLCIIKRVLLEYKKISRLNDLCPTSVVTLSRGFLRCSNVLLPKAQEL
NDKDICCIEQFICDYLDHPMDSVKYNVKNVLKDYIKMKYQMGSLEDLALK
VLKWDKQDKRRYVVLTPVIKFGGFKIIWFILKKSASFKEMVIENLSDSIL
RSSCTELYKTCLNHVEDCEKWTWLKPVIDGYKNDTGNLCRRNHLDLLVKE
IIKRGGPSIADALINDILNEDNRSPTSTCIALQSLKTIKLLKGSEFHFED
SSFIIECMTDLSDEVRLEAFDFIVSSLKTSEVLEKVELNLILEYGVKTNL
XLXXPPLQMQFLSTIKKFLCRLNESFVASKRVNDENTCKLYIESLKKLND
WIVMENLSKPLVHLYFRTLGYEILLMCCEIFGKENKLYSLNSEHGIVLVD
CLKNESHDKNCDNIIKILHKYYEGNRSIVRFSTETIIKLLRTPMPRNATI
AQYLTNVLRICKYDEEFENVLFEEFVSQVNRAKSSLVNASFEGPIYGVLG
CLKGGPLIKSLVEYCYEIWNLVSPVVNDSSPEGFSQESNNSLECDPQLLL
LLAWRTTKEVCDLFQIVATRNDVNTDILKISKFFIQVFSETKHRGVFERA
YTGFCAICNLLWLHDDLKIRQFPRKLLDETLQTISLVRDDVTVTRRSAGF
PFLIQSLISSEPGMSSFDHVMKQLLGWSSLSSSNISLKVHAYNILRAIYK
DSLLGDQVMKYISCGIKTAILGFKSSFWPIRNSSTLLFSSLITRLFGVKR
DQDDLSEKNGSYTYKIFFERFPELYNFFLEQLDTSKDKTSPPSLNCTTIF
PTLLILAKLKTTPCLVSSKITVEIESLDIIHYIVFNGGRVTNSDLVKQFN
PYLCKNVELSEVNRSILRNILKEICFIQVIQNQKFFALRESFLGLKPRII
LERLEEISKTTSFSRSRNTVYEPSLQNEKSYFVRPLLSDVSVVAIKNEDE
KVPSLIKSFDQLNVQSLENKYVDRSAKSRVSLTKWRRIIRENVESEERLF
LLSEKKKRWLINSAMNKTEVILKLLEEDPSMVEAKEPLSGYTALHWAAKH
GNCVLLSEIASKVEDINQKSNGGHXPLXLAAMNNRTKAYKMLIEKYNANI
DIRDHSGNKALFYLKKSMMNKPKKLHHFHNQIIGFLSHPVLKIRHLASYA
LXALSSEESELRLAKALIDHMTTSCSSSNALHGILYSLNLMIKKCPKIKQ
VIMSYFQDQASAIPIRSPMILTERLNLLGLSEPNKVDLMQELSQIKGSDF
PHPGKHLYYSLLLEKSVEWTLLSRNENMAHFLMAHNTPMYFEILLTKYTQ
VESFALCLNKENKEKRVELCSDLNEFQCFLRLFLNTDELDCRSSIWNKMI
HLLESPSIMSPINFEFLQLCVNAFTKLIKSFNTTHEELRMWGSIMKKWVL
LDGSIVLKRNISISISESINHLKSINESNSSILCIRTKYVLYQAFEAMKE
IGQNEKTNDDELSSLAFEKGNEHIRYDVIYKVQEKIRSHYGDNQLKNEEF
QLQMFADFFHLP

mRNA from alignment at LSalAtl2s53:791859..799626+

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000008715-704562 ID=EMLSAT00000008715-704562|Name=EMLSAT00000008715|organism=Lepeophtheirus salmonis|type=mRNA|length=7768bp|location=Sequence derived from alignment at LSalAtl2s53:791859..799626+ (Lepeophtheirus salmonis)
ATGTTTGCTCCTAATGGACAGAATAACTCACACACCTTTCGAACAAAATG
CCCAAAAAGAAAAGAAGACCTCTCATCTTTGATGACTCAAAGTCCCAAAA
AGGTTAAAGATCTTTGTTCTCTTCTTCAAGAGGCTCCTGACTTTCAAAGC
CAAATCAATTGCCTACAAAAAGTAAAAGAAACACCTCAAATTTTTAAAGA
ATCTTATCAATTTATTTCCTATATTTTTAGTGGAAGKCGGATCTCGAGKC
TGTAGCGKCTCTTTTCTTTTTACTTCCACTCAAGTCCTCACTTCGACGGT
CCATCGCTTCCAAGATAAAGAATTACGCAGATTCAGAAGAAATCCTCACT
TCCTATTTTTTAAAAGAACTTAAGAAATATGATGGAAGTGCTTTTATAAG
CAATGTCATTAAATGCTGTGATGATAATAATGCTATCCTTCGCCAACTCC
CAACCTTTCTTTCAATCGAACCCTTTATGAAAAACATAACACAAACTTTA
TCTGCAAATAATGAATCGGAATTATCAGAAGTCTTGCGAGCTTTATCCTA
TGCAAGGGTGAATGCTCAAAATTCCATCTTTGAAACTCATCCTGATTTAA
AAATATTGCTTCATAAAATTGTACAAAGACAATGCTTTAGCACAGATACT
AGAGGAAAATCTGCGAAAATTCTACTATCTGAAGAGATCCTTTGTCAACC
TGGATATGACGTACTTCTAGACGTAAGGTTTCTGTGTCCCAGCTTGTAAT
TTTATTTTAATATAGTTCCTTATTTCTTAGATTATATCACTTATTAAAAA
TACTTCATCTCCCTATTTTTGTACAAATATTGAAAGTGAACTCATCTACT
ACTACGGTATTGTGACTTCATCTTCATTTCTTTGCATTATTAAAAGGGTT
TTGCTTGAGTATAAGAAAATAAGCCGTCTAAATGATTTGTGCCCTACATC
TGTTGTAACTCTTAGTCGAGGCTTTCTGAGGTGTTCAAATGTTCTTTTAC
CAAAAGCTCAAGAGTTGAATGATAAAGATATATGCTGTATCGAACAATTT
ATATGTGATTATTTGGATCATCCGATGGACTCCGTCAAATATAACGTTAA
AAATGTACTAAAAGATTACATTAAAATGAAATATCAAATGGGTTCTCTGG
AAGATCTTGCTCTGAAGGTCTTAAAATGGGATAAACAAGACAAAAGAAGA
TATGTCGTTTTGACTCCTGTTATCAAATTTGGAGGCTTCAAAATAATTTG
GTTTATATTAAAAAAATCTGCCAGCTTCAAAGAAATGGTTATAGGTATTT
AATGAATTATTATAAATTAATAAAACATGAAATGCAATGATTCGTAATTA
TGGCTCAATGGTATTGTAGAAAATTTGAGTGACTCAATTCTTCGTTCATC
GTGTACCGAGTTATATAAGACTTGCTTAAACCACGTTGAAGACTGTGAAA
AGTGGACTTGGCTTAAACCAGTGATAGATGGTTATAAAAATGATACTGGG
AATTTGTGTAGAAGGAATCATTTAGACCTACTGGTTAAAGAAATTATCAA
ACGAGGAGGTCCGTCCATTGCTGATGCATTGATTAATGATATTCTTAATG
AAGATAATAGAAGTCCCACATCAACGTGCATTGCATTGCAAAGTTTGAAG
ACAATTAAACTTTTAAAAGGATCGGAATTTCATTTTGAAGATTCTTCTTT
CATTATTGAATGTATGACAGATTTGAGTGATGAGGTATGTATGATTAAGC
CTTATGATATTAAATTTTAGAAGAATAGTATAGTTGTATCGTTTTAGGTT
CGGTTGGAAGCCTTTGATTTTATTGTTTCATCTTTAAAAACGTCTGAAGT
GCTAGAAAAAGTTGAACTAAATTTGATTTTAGAATATGGAGTTAAAACTA
ATTTGTTMCTAYCCGMCCCGCCTCTACAAATGCAATTCTTATCTACAATA
AAGAAGGTACAAAGAATAAACAAAGATATATGCAAGCATTTTAAATTGAA
TAATTATTTTTTACAGTTTTTATGTCGGTTAAATGAAAGTTTTGTGGCAA
GTAAACGTGTAAACGATGAAAATACTTGCAAACTTTACATTGAGAGTTTA
AAGAAACTAAATGACTGGATTGTTATGGAGAATTTATCGAAACCTTTAGT
ACATCTATATTTTCGCACTTTGGGGTATGAAATTTTGTTGATGTGCTGTG
AAATCTTTGGCAAAGAAAACAAGCTATATAGCCTAAACTCTGAGCATGGT
ATTGTTCTAGTTGATTGTTTAAAGAATGAATCTCATGACAAAAACTGTGA
TAATATCATAAAAATATTACATAAGTATTATGAAGGGAATCGTAGCATTG
TAAGGTTTTCCACTGAAACTATTATAAAACTTCTAAGAACACCTATGCCT
AGAAATGCAACCATTGCTCAATATCTAACCAATGTTTTAAGAATTTGTAA
ATATGATGAAGAGTTTGAAAATGTTTTATTTGAGGAGTTCGTAAGTCAAG
TAAATCGAGCCAAAAGTTCTTTGGTCAATGCATCTTTTGAAGGACCTATA
TATGGTGTGTTAGGCTGTCTCAAGGGGGGCCCCTTGATCAAATCTCTAGT
TGAATATTGTTATGAAATATGGAATTTAGTGTCGCCAGTTGTTAATGATT
CTTCCCCGGAAGGATTTTCTCAGGAAAGTAATAACTCATTAGAATGTGAT
CCTCAGTTGTTGCTTCTGTTAGCGTGGAGAACGACTAAAGAAGTATGTGA
TTTATTTCAAATAGTTGCTACTCGAAATGATGTCAATACGGATATTTTGA
AAATTTCAAAATTTTTCATTCAAGTTTTTAGTGAAACTAAACATCGCGGT
GTATTTGAGAGAGCTTATACTGGATTTTGTGCTATTTGTAATTTATTATG
GTTACATGATGACTTGAAAATTCGACAATTTCCCAGAAAATTGCTTGATG
AAACTCTTCAAACAATTTCGCTTGTAAGAGATGATGTAACGGTTACAAGA
AGAAGTGCAGGCTTTCCTTTTCTTATACAATCCCTGATATCCTCTGAGCC
TGGTATGTCTAGTTTTGATCATGTTATGAAGCAATTATTAGGATGGTCAT
CTTTATCTTCTTCGAATATATCCTTGAAAGTCCATGCTTACAATATCCTT
CGAGCAATATACAAAGATTCTCTTTTAGGAGATCAAGTCATGAAATATAT
TTCGTGTGGAATAAAAACTGCTATATTGGGATTTAAAAGTAGTTTCTGGC
CGGTAATTATGCCTTTTTTTTGAAAAGTTATTTGTTCTCCCAATTTACAT
TTGAGTAATTTTAATATAATTAAAAAAAAATATTTTTAGATTGATGATCG
GTAATTATACACACACATTTTTTCTATTATTTAAGTGATAAACTAATTGT
GATCGTTAATTTGTTTTTCTTCATGCTATGAAGCAAATTCTCAAATGTTT
AAGAAAAGCTTTATTTAACTAATTATATCAATGATCTTTTTATGGATATT
TACATCATAGATTCGAAATTCCTCAACTTTGTTATTCAGCAGTCTCATCA
CTCGCCTGTTTGGTGTGAAAAGAGACCAGGATGATCTCTCAGAAAAAAAT
GGCAGTTACACCTACAAAATATTTTTTGAAAGATTTCCTGAATTATACAA
TTTCTTCCTTGAACAATTGGATACATCCAAGGACAAGACATCTCCTCCGT
CTTTGAACTGCACAACAATTTTCCCTACACTTCTTATTCTGGCTAAATTA
AAAACGACGCCCTGTCTTGTTTCATCTAAAATAACTGTTGAGGTAATCAT
GTATTTTTTTTTTAATATTAGCGATAATGAGTTTTATTTGCTTGGGTTAG
TAGGGGCGTCCGTAAAAACAAAAATCGTGCGGATACCCCTGGTTAGTGTT
ATATAAATTATTTTTTAAACGTATAAGATTATATACATATAGCTATATCA
TAAATATCTTATCAGGATTATTCACCAATCATTTTTTTTTCATTATTGAT
AAGGCTGATAAATTATAAATTTAAGGTATTTGTGCTTATAATTGATAAGC
ATTCTTTGTGAAAATGTCGATTTTTGATACTAGAAAGATAGAATCCTTGG
ATATAATTCATTATATTGTTTTTAATGGTGGTCGTGTAACCAACAGTGAT
TTAGTAAAGCAGTTTAATCCTTATCTTTGTAAAAATGTGGAGTTGTCCGA
AGTGAATCGTAGTATTTTACGCAACATACTCAAAGAAATATGTTTTATTC
AAGTAATTCAAAATCAGAAGTTCTTTGCCCTACGTGAGTCATTTCTAGGA
TTAAAGCCCAGGATCATTTTAGAAAGGTTAGAAGAAATAAGTAAAACAAC
AAGTTTTTCACGATCCCGAAACACTGTTTACGAACCTTCTCTTCAAAATG
AAAAGTCTTACTTCGTTAGACCTTTATTGTCTGATGTCTCAGTCGTTGCC
ATAAAAAACGAAGATGAAAAAGTTCCTAGTTTAATCAAATCATTTGATCA
ACTTAATGTTCAATCTTTAGAAAATAAGTATGTCGATCGCTCAGCCAAAT
CAAGAGTATCACTAACTAAATGGAGAAGAATAATTAGGGAAAATGTGGAG
TCTGAAGAGCGTCTCTTTTTGCTTAGTGAAAAGAAAAAACGCTGGTTAAT
CAATTCAGCCATGAATAAAACAGAAGTAATCCTCAAACTATTAGAAGAAG
ATCCTTCCATGGTTGAAGCAAAGGAGCCATTGAGTGGGTATACTGCCTTA
CATTGGGCTGCAAAACACGGGAACTGTGTCCTTCTATCAGAGATAGCCTC
AAAGGTGGAAGACATTAATCAGAAATCCAATGGTGGTCATMCCCCACTTW
TTTTGGCTGCCATGAACAATAGGACAAAGGCTTACAAGATGCTAATCGAA
AAATATAATGCAAACATAGATATAAGAGACCATTCTGGTAACAAAGCGTT
GTTCTACTTAAAGAAATCCATGATGAATAAACCAAAAAAAGTTACTTTCT
CAATACCCAAGCAAATACAGACTACTTTATAAATGTTAATAAACCAATTG
TTACGATTTTCAAATAGATTTTCTCTAATACATAGCTTCATCACTTCCAT
AACCAAATTATTGGCTTCTTATCCCATCCTGTTCTTAAAATACGACATTT
GGCCTCATATGCTTTATKTGCACTATCATCTGAGGAAAGTGAGCTTAGAT
TGGCCAAAGCTTTAATTGATCATATGACCACTTCTTGTTCATCATCAAAT
GCTTTGCATGGAATTTTATATTCTGTAAGCGGTTAATAAACATATATTAA
TGGCTGTACGTATAAATCATAAATAATTTTATTTCTAGCTCAATTTAATG
ATTAAAAAGTGCCCCAAGATAAAACAAGTCATCATGTCTTATTTTCAAGA
TCAAGCGAGTGCTATTCCCATTCGATCTCCTATGATACTCACTGAAAGGT
TAAATTTGCTTGGATTATCCGAACCAAATAAGGTGGATTTAATGCAGGAA
TTGTCTCAAATCAAGGGATCTGACTTTCCACATCCTGGAAAGCATTTATA
TTACAGTCTTCTCCTGGAAAAATCTGTTGAATGGACACTTTTATCAAGAA
ATGAGAATATGGCTCATTTTCTTATGGCTCACAATACTCCAATGTATTTT
GAAATACTCCTTACAAAATATACACAAGTTGAAAGTTTTGCTCTTTGTTT
AAATAAGGAAAATAAGGAGAAGCGAGTAGAGTTATGCAGTGATCTTAATG
AATTTCAATGCTTTCTGAGATTGTTTTTGAACACGGATGAACTTGATTGT
CGAAGTTCTATATGGAATAAAATGATCCATTTATTGGAGTCTCCATCAAT
TATGTCTCCAATTAATTTTGAATTTTTACAACTCTGCGTAAACGCATTTA
CAAAGCTTATCAAATCTTTTAATACAACCCATGTAGGTTTTAAAAAAAAA
AATATATATATATTCATAATTATTTTCATTATTTTCATATTTTTAGGAGG
AACTACGGATGTGGGGTTCAATTATGAAGAAGTGGGTCTTATTAGACGGT
AGCATTGTTCTTAAAAGGAACATATCCATTTCTATTTCTGAATCAATTAA
TCATCTTAAGTCTATAAATGAATCAAATTCAAGTATGTAATATTTTTTTA
AATTTTTATTCAGATTATGCGTGTTTCTATAAAATCTCCATGCAATTTTT
ATCATTCTCTTAACTTTCATTGAGGTTTTTTATATTGAATTTATAATTGG
GGAGAGCCTAGTGAGTTCGTGCACCTGCACATTCTTTGTATCATGAAACA
TTCATTTATGGGCCAAATAAAAAAAAATATATATATATATGTAGTATCTC
CAGAATAATACACGCTTCTTATAATTACTAAAACATAAGCTGTATTCTCG
AGTAAACGTAAATGACTGATACAGTTTATACAAAATAATAGATTAAGAAA
TACTCTCGGGAAGAACGTAGAATCAACTTGTATAGCTGAACTCTACATAT
ATATATATCCATATGAAATAAGAGCTATTTGGTTCCATTTAATCATTAAA
AAAAATTACGTTTTTTTTCATACTATTTAAAAACAAAAATAGTTGTTAAA
AATATTTGAAGTCACACAAACCGTCAGGTGATGATATCGTTTTTCTTTTT
TTAAACAATAAAAATCCCCTACTTTTTCAATATTTAACCCATTCTTTGAC
TGATTTTGATTCATTTTTAATTTGTTACAATATAAGTATTCCAATTGAAG
TATCATTGAATTATGATAATTTTATTTAGGTCAAGCCATTTTAGGGCCTT
ANAATACACAAGTTTAATTCGTATAAATTTTGAATTAATTGAGTGTTTGT
TGTCAACCGCTGTTCAAATATCACCACCCGGTTCTCACCCATCTAATTTA
CTTTTTGTTGTTTTTAAAAATTTAAAATTCATGTTTTTCAGCACTTGTGG
CTCTTTTGTTATGGTTTGTACTTCTCATCTTATCCTGTGAGGATGACTAT
TTTATTCAAAAGATTATTTACAAAATTTTAATTGAACTCTGGGGCACGAA
GAAGCTTATTGTTCCAAATCAAATGTATATGGAACTTTGTGATTGGTTGT
TGACAAACTCTTCAGTTTATGTATCAGAACAAAATATGTTCTCTACCAAG
CTTTTGAAGCGGTAAATAGTTGATTAATTTCTTTATATAATTTCTTATAT
CACTTGATTACTTTTTTTTTATCAGATGAAAGAGATTGGTCAAAATGAGA
AAACAAATGATGATGAACTATCGAGTCTTGCCTTTGAAAAAGGGAATGAA
CATATAAGATATGACGTCATCTATAAAGTACAGGAAAAGATACGGAGTCA
TTATGGTGATAATCAATTAAAGAATGAAGAGTTTCAATTACAAATGTTTG
CAGATTTTTTTCATCTCCCCTAATGTCTATAAAATAATAATTTTGATAAA
TAGATTTATACTTTGTCAATTAATCCTTGTATTAATTTTGCACCCTTCAG
CTTTAAAAAAGCTCTTCATGATTGGAATATTCGTAAGGGAGAGTATGGTG
GGTACTAGGGTTAACCATTTCTCGCGAAATGGATTTGGATCAAGATCCTG
TGAAACAAGTTTTGAAATTACAGGATCCTGGGAAATATATTGATCTAGAA
ACCCTAGTGTGTACCTAACTCACATAATTATTTGTTTTATGGAAGGTGGT
GTATACTAATATTGTCTAAATAAAACGGTTATTCTGAGACTATCTAATTG
AATAAAAGAGGATTTAAA

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