EMLSAT00000008836, EMLSAT00000008836-704683 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008836
Unique NameEMLSAT00000008836-704683
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s5500supercontigLSalAtl2s5500:3079..4247 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008836 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008836EMLSAG00000008836-691602Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000039285EMLSAE00000039285-748213Lepeophtheirus salmonisexon
EMLSAE00000039286EMLSAE00000039286-748214Lepeophtheirus salmonisexon
EMLSAE00000039287EMLSAE00000039287-748215Lepeophtheirus salmonisexon
EMLSAE00000039288EMLSAE00000039288-748216Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768346auto768346Lepeophtheirus salmonispolypeptide
EMLSAP00000008836EMLSAP00000008836Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008836

>EMLSAP00000008836 ID=EMLSAP00000008836|Name=EMLSAP00000008836|organism=Lepeophtheirus salmonis|type=polypeptide|length=334bp
MVYKKGDEIMRCSPFSYVVKENYRDKVCDFCFSCVETKTWKCSRCCQIYY
CGRECQRSSWMEIHKHECKYLYRLDSKXPPQNLLFIVRILCKLKYNGGYS
KEVSMPNGVYRRFDDVAYFKDNILLDPEWKNTFFEYFSIIKTKLGGVLET
NESEVLNIFTKILTNSVFMFNEKLLNFGTCISLEFSVRNHSFTPNAFYLW
IGRKFVVKALCDIANFDDVRVAYKGNLGSLRQEWLZNQHIFDCNCDECTN
NPFNRKDVKLTCPYCPKYQHLLDGSRFVSILPIKRTFKQARMRNVKGKTC
LFFKEVEYCDKWMDYYSLHTKHGLQILLKLIFGS
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mRNA from alignment at LSalAtl2s5500:3079..4247-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008836-704683 ID=EMLSAT00000008836-704683|Name=EMLSAT00000008836|organism=Lepeophtheirus salmonis|type=mRNA|length=1169bp|location=Sequence derived from alignment at LSalAtl2s5500:3079..4247- (Lepeophtheirus salmonis)
ATGGTGTATAAAAAAGGGGACGAAATTATGAGATGTTCTCCCTTCTCATA
TGTTGTTAAAGAGAATTATCGTGATAAAGTATGCGACTTTTGCTTTTCAT
GTGTAGAAACAAAAACTTGGAAATGTTCAAGATGTTGCCAAATATATTAT
TGTGGAAGAGAATGTCAAAGATCCTCTTGGATGGAAATTCATAAACACGA
ATGCAAATACTTGTATAGGCTAGATTCAAAAGMCCCTCCACAAAATTTAC
TTTTTATTGTTCGAATACTCTGTAAGCTTAAATATAATGGTGGATATTCA
AAGGAAGGTAATATATAATTAATAAATAAATTAATTTACATTAATTCTGA
AAAATTTAGTTTCTATGCCCAATGGGGTTTATAGAAGATTTGATGACGTA
GCGTATTTCAAGGATAATATTCTATTGGATCCCGAGTGGAAGAACACATT
TTTTGAGTATTTCTCTATAATAAAAACTAAGCTTGGTGGAGTATTGGAAA
CTAATGAATCTGAAGTACTCAATATATTTACGAAAATATTAACAAATTCC
GTCTTTATGTTTAATGAAAAGCTTTTAAACTTTGGGACATGTATATCATT
AGAATTTTCTGTCCGAAATCACTCATTTACACCAAATGCATTCTATTTGT
GGATTGGTCGTAAGTTTGTTGTTAAAGCTCTGTGTGATATTGCTAATTTC
GATGATGTAAGAGTAGCTTATAAGGGAAACCTTGGGAGTCTTAGGCAAGA
ATGGCTGSAAAATCAACATATTTTTGATTGTAACTGCGATGAATGCACCA
ACAATCCCTTTAATCGTAAGGATGTGAAATTAACATGCCCTTACTGTCCC
AAATACCAACATTTATTGGATGGTACTAAATGYACGAACTGTAAAAAGGT
ATAATTATCATATAAATTTAGATATTTAAGAGTATGTAATTTCATTCTAG
GAAGTAGATTCGTTTCGATATTACCAATTAAAAGAACGTTTAAACAGGCT
AGAATGCGAAATGTTAAAGGAAAGACTTGCTTATTTTTTAAAGAAGTTGA
AGTTTTTTCATTCCTTCGATTAAGTATCCTTAAAGTATTGTGATAAATGG
ATGGATTATTACAGCTTACACACCAAACATGGATTACAAATTTTGTTAAA
ATTAATATTTGGATCRTGA
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