EMLSAT00000008981, EMLSAT00000008981-704828 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008981
Unique NameEMLSAT00000008981-704828
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s5613supercontigLSalAtl2s5613:116..1168 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008981 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008981EMLSAG00000008981-691747Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000039890EMLSAE00000039890-748818Lepeophtheirus salmonisexon
EMLSAE00000039891EMLSAE00000039891-748819Lepeophtheirus salmonisexon
EMLSAE00000039892EMLSAE00000039892-748820Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767809auto767809Lepeophtheirus salmonispolypeptide
EMLSAP00000008981EMLSAP00000008981Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008981

>EMLSAP00000008981 ID=EMLSAP00000008981|Name=EMLSAP00000008981|organism=Lepeophtheirus salmonis|type=polypeptide|length=219bp
MDASMRGKFILTLADLMERDIGILAKLITIDNGKPIDTSVFEVQSAIKKE
PIGVVGQIIPWNYPLAMISWKWGLALTTGCTLVLKPAEQTTLCALHMASL
IKEAGFPKGVINVVTGDGPQTGAALVKNLDVDKIAFTGSTGVGKLISSSG
NDSNLKRISLELGGKSPVVVMNDCPSLDAINQEQMEKILDLIDSGVKEGA
KIETGGSRVGTKGYFVEPT
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mRNA from alignment at LSalAtl2s5613:116..1168-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008981-704828 ID=EMLSAT00000008981-704828|Name=EMLSAT00000008981|organism=Lepeophtheirus salmonis|type=mRNA|length=1053bp|location=Sequence derived from alignment at LSalAtl2s5613:116..1168- (Lepeophtheirus salmonis)
ATGGATGCATCAATGCGTGGAAAGTTCATATTAACTTTAGCAGATTTAAT
GGAAAGGGATATTGGTATTTTAGCTAAATTAATTACAATTGACAACGGGA
AGCCTATTGACACATCTGTATTTGAAGTACAATCTGCCATCAAGGTATTT
TGATACTAAGCTAATAAAAAACATGGCTCTACATTTCCCATTGATGGAAA
TTTTATGAGTTATACACAGAAAGAACCAATTGGTGTTGTGGGTCAAATCA
TCCCTTGGAATTATCCTCTTGCCATGATTTCATGGAAGTGGGGTCTAGCT
CTAACAACGGGATGTACCCTGGTCCTCAAACCTGCAGAGCAAACAACATT
ATGTGCTCTACATATGGCTTCTCTAATTAAAGAAGCTGGATTTCCAAAAG
GTGTGATTAACGTTGTAACAGGGGATGGACCTCAAACGGGAGCAGCCTTG
GTTAAGAATCTGGACGTAGATAAAATTGCATTTACAGGGTCAACAGGAGT
AGGAAAGCTAATCTCAAGTTCTGGGAATGATTCAAATTTAAAAAGAATAT
CCTTGGAGCTCGGAGGAAAAAGTCCTGTCGTTGTGATGAATGATTGTCCT
TCATTGGATGCGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TACTAAGAACTTGCATGGACCTCAGGTAGACTTCATATTATTATACTCAA
ATTAAAAACTTAGTGTTTCAATGCAAAATTTAGATCAATCAAGAGCAAAT
GGAGAAAATACTGGATCTCATCGACAGTGGAGTCAAAGAGGGYGCAAAAA
TCGAAACTGGAGGTTCCAGAGTTGGTACTAAAGGATACTTTGTTGAGCCA
ACC
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