EMLSAT00000011956, EMLSAT00000011956-707803 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011956
Unique NameEMLSAT00000011956-707803
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s8494supercontigLSalAtl2s8494:61..1368 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011956 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011956EMLSAG00000011956-694722Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000053519EMLSAE00000053519-762447Lepeophtheirus salmonisexon
EMLSAE00000053520EMLSAE00000053520-762448Lepeophtheirus salmonisexon
EMLSAE00000053521EMLSAE00000053521-762449Lepeophtheirus salmonisexon
EMLSAE00000053522EMLSAE00000053522-762450Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767810auto767810Lepeophtheirus salmonispolypeptide
EMLSAP00000011956EMLSAP00000011956Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011956

>EMLSAP00000011956 ID=EMLSAP00000011956|Name=EMLSAP00000011956|organism=Lepeophtheirus salmonis|type=polypeptide|length=286bp
MWYKYIVLFVFTTFKRTYSELSHAQCRIIHDKYSYKGIGSRNLLGGKVWP
NNTVPYTLAQGFSKTDLSLIQSAIDEIENKTCVRWVPRNGEKSYVYIKND
ERGCFAILGYNQYRRKHKLNLQRSNGFSSCMELYNTKCXHILGYDHEQTR
PDRDSYVKIHWDRIKRHSLNNYFKNIYDNATVIPPKCQPSSNATTFDDCY
SGYTTDTFGYAYDYGSVMHYGLDDFQTSDNNTMDVLRFVPLGIEVGQRNG
MTELDALKIKAKYKCDQQSTLSTTLPTQVTTKGSKN
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mRNA from alignment at LSalAtl2s8494:61..1368-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011956-707803 ID=EMLSAT00000011956-707803|Name=EMLSAT00000011956|organism=Lepeophtheirus salmonis|type=mRNA|length=1308bp|location=Sequence derived from alignment at LSalAtl2s8494:61..1368- (Lepeophtheirus salmonis)
ATGTGGTACAAGTACATTGTTTTATTTGTTTTCACAACATTTAAACGAAC
GTATTCTGGTAGATTCATTTTGTGAAAGTAAACACCTTCATCAAGTAATC
AATATCTTTTTTAAATAGAACTGAGCCATGCTCAATGTCGAATCATCCAT
GATAAGTATAGCTACAAGGGAATTGGATCAAGAAATCTTTTAGGAGGAAA
GGTGTGGCCCAACAATACAGTTCCCTATACATTAGCTCAAGGATTCAGTA
AGACGGATTTGAGTTTAATCCAATCTGCTATAGATGAAATAGAAAATAAA
ACATGTGTGCGATGGGTTCCTAGAAATGGAGAGAAAAGTTATGTATACAT
TAAGAACGATGAGAGAGGATGTTTTGCTATCCTTGGTTACAATCAATATA
GACGAAAGCATAAATTAAATTTGCAAAGAAGCAATGGATTCTCTTCTTGC
ATGGTAAGTRAAAAATTAGACAATGTTATGTTGGATAATCAACACGAAAN
NNNNNAAAGCATAAATTAAATTTGCAAAGAAGCAATGGATTCTCTTCTTG
CATGGTAAGTAAAAAAATTAGACAATGTTATGTTGGATAATCTAAAATTT
TTTTTAGAACCTAATAATTATTCTTAAAACAANNNNNNNNNNTATAAATA
GAGGATCTTATTTATTTTAATATTACTCTGGAGCACCTGGAGTAAAGATC
GTGTCCACTCTTATTCATTTTAATTCATAAATCTTATATCGTCGTTACCA
CCATACAATAAAAAGTTTTATTTTTCTTTAGGTCTCAGGAATTGTACAAC
ACGAAATGCTNNCATATACTTGGATATGATCATGAGCAAACACGACCTGA
CCGAGATAGTTATGTCAAAATACATTGGGATAGGATTAAGAGACATTCTT
TAAATAATTATTTTAAAAACATTTATGATAATGCCACTGTCATACCACCC
AAATGCCAACCCTCGTCAAATGCAACAACCTTTGATGATTGCTATTCAGG
TTATACTACAGACACATTTGGGTATGCTTACGATTATGGATCTGTGATGC
ATTATGGATTAGATGAGTGAGTAGCTAAATAATACATCAATTCCTCTTAT
GTTTATATAATTTCAAAATAGTTTTCAAACGTCAGATAATAATACAATGG
ATGTACTCAGATTTGTACCACTTGGAATTGAAGTTGGTCAAAGAAATGGA
ATGACAGAATTGGATGCATTAAAAATTAAAGCAAAATATAAATGCGATCA
ACAATCAACTCTTTCTACAACTCTCCCGACACAGGTTACAACAAAAGGTT
CAAAGAAT
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