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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 56..87 |
| None | No IPR available | COILS | Coil | Coil | coord: 92..98 |
| None | No IPR available | COILS | Coil | Coil | coord: 88..91 |
| None | No IPR available | GENE3D | 1.20.1270.50 | | coord: 507..596
e-value: 1.1E-28
score: 98.8 |
| None | No IPR available | PANTHER | PTHR11607:SF4 | MANNOSIDASE ALPHA CLASS 2A | coord: 16..595 |
| None | No IPR available | PANTHER | PTHR11607 | ALPHA-MANNOSIDASE | coord: 16..595 |
| None | No IPR available | SUPERFAMILY | 88688 | Families 57/38 glycoside transferase middle domain | coord: 507..603 |
| IPR015341 | Glycoside hydrolase, family 38, central domain | SMART | SM00872 | Alpha-mann_mid | coord: 508..596
e-value: 1.0E-24
score: 98.1 |
| IPR015341 | Glycoside hydrolase, family 38, central domain | PFAM | PF09261 | Alpha-mann_mid | coord: 508..596
e-value: 1.1E-21
score: 76.6 |
| IPR000602 | Glycoside hydrolase family 38, N-terminal domain | PFAM | PF01074 | Glyco_hydro_38 | coord: 173..503
e-value: 7.5E-87
score: 290.9 |
| IPR027291 | Glycoside hydrolase 38/57, N-terminal domain | GENE3D | 3.20.110.10 | | coord: 134..504
e-value: 4.1E-120
score: 400.6 |
| IPR011330 | Glycoside hydrolase/deacetylase, beta/alpha-barrel | SUPERFAMILY | 88713 | Glycoside hydrolase/deacetylase | coord: 128..504 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000002323 ID=EMLSAP00000002323|Name=EMLSAP00000002323|organism=Lepeophtheirus salmonis|type=polypeptide|length=647bp
MSCGCSTQQYSWMLFRMRRTKAILGSLVLACFLIFFYTLSQNTNEETQGD
TPKINLENLEVKLKGLEHAIEGNERMLSSIKESINNXEKHXASLDKESNV
IRSKGHSSVRKTFATIHKADXLFAQRSSTXTNISTLAIYEEIPFDNQDGG
PWKQGWPITYSQSAFSQSDKLRVFVVPHSHNDPGWIKTFDTYFKENTIYI
LNNIVPKLTADPRRKFIWAEISFFSMWWNLQSEDVRSNIIKLLENGQFZI
VTGGWVMNDEANTYYGAMIEQQISGHEWCKNNLKGYQPTFGWAIDPFGMT
PTMAYLLKRMGFEGMLIQRTHYEVKKYLARNQNLEFKWRQHWDHESSTDM
LTHMMPFYSYDIPHTCGPNPKICCQFDFDRLPGMRTGCPWKIPPKPITDS
NVEERALLLLDQYKKKAQLYKTNVVLVPLGDDFRYDKSVEWNKQFDNYQK
IFDYVNNNPELNAELKFGTLGDYFRTLKNESKRKTGLQDGLFPSLSGDFF
TYADVNDNYWSGYYTSRPFFKNFDRVLGGYLRAAEIMFSMAWAEMMSYSN
SDTKKISNPLMKYIVEARRSYSLFQHHDGVTGTAKKHVMQDYGRRYVFCF
NSVFIFGSNRHYSELLGVDKLKKKKNKFSFNNIHMYNGTRFTFNRTH back to top
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