EMLSAP00000005000, EMLSAP00000005000 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000005000
Unique NameEMLSAP00000005000
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length832
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360RRMcoord: 45..110
e-value: 3.0E-16
score: 70.0
coord: 204..270
e-value: 0.9
score: 6.9
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 46..108
e-value: 9.5E-13
score: 47.4
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 44..114
score: 16.978
IPR012677Nucleotide-binding, alpha-beta plaitGENE3D3.30.70.330coord: 45..114
e-value: 7.4E-18
score: 63.9
IPR012677Nucleotide-binding, alpha-beta plaitGENE3D3.30.70.330coord: 207..281
e-value: 4.6E-6
score: 26.0
IPR012677Nucleotide-binding, alpha-beta plaitGENE3D3.30.70.330coord: 388..450
e-value: 1.8E-4
score: 20.9
coord: 288..328
e-value: 1.8E-4
score: 20.9
NoneNo IPR availablePFAMPF13893RRM_5coord: 392..445
e-value: 8.2E-6
score: 25.4
NoneNo IPR availablePANTHERPTHR24011:SF130SUBFAMILY NOT NAMEDcoord: 45..319
NoneNo IPR availablePANTHERPTHR24011FAMILY NOT NAMEDcoord: 45..319
NoneNo IPR availableSUPERFAMILY54928RNA-binding domain, RBDcoord: 371..449
coord: 208..284
NoneNo IPR availableSUPERFAMILY54928RNA-binding domain, RBDcoord: 200..235
coord: 44..124

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000005000 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000005000EMLSAT00000005000-700847Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000005000 ID=EMLSAP00000005000|Name=EMLSAP00000005000|organism=Lepeophtheirus salmonis|type=polypeptide|length=832bp
WKLEREKKKRSKTNNDHVDIELEALRNTHRGFNRFLKIRMNGIYNVYVGH
IDSRVKIRDLRDIFHSYGPVLEVTIVSTHGFVNFSSRSDAESAIRDLNGY
SLRGRRLHIDYSEEFYHYLRKKYPRRSIHRTPDPELTKPRSREKESERKK
AGDLRELLRSRKKIDSARQQKSQSYSSSSNTITRTFIPSSSSKSSSSKNV
IIHKFSLENLENKVEKEDIKKLFENVGTVHHVKQYSSHASIDVECSLEEA
KEAVDTLDKNMWMXNCISVNFTEESRSNKRRTTGASLEDKKKRTKKSKSS
EDENLSIQESRTPTRTTIIKNVIESSEKVSQSIEEPSLKQIEKKKDFSPS
SYMADNILAVERIVASKVKKLRYFLIFCATTCNKSFLEDMKEVFSRFGNV
QSCTRNDDGQTILVQSICTERQAVQCIVDTNKIKYKGQELRVKFANGSDE
DMPEFRSNASLDRELVPGDRAVVDLIQNKQGHGIPYVLSGAYWVALSVHI
KTTYRGVNFARSLRMESPNASGSRDNVSLGRIVFLNPPSSSSSPVLSGIA
VIDSGEFAGQRVEFERQDXEXFGHSLTDADLSLIFHFGDEVFIQVKSYNS
YCVEKLWIGTPKEAAIPPHLSNSQDRLLMKKYLYDHGLEMNGFDSLLRGE
MISRSYLPLVGQPLKGKIGGFKSKSSIHGAEEDSLVIKADEIGVDVNVEV
SRENVYFYGRCLDKANLKPLLSEGEDVFFEVHPVYNKENAEKQPYQAALV
WVGGESHRPFYVGPSTITEISPRMDSLLNQSLRAKSLAEEDFKAIVSGKF
VDEKKEEKSSYVFCSLAVYKLIVFVFMNVEQR
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