EMLSAP00000005726, EMLSAP00000005726 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000005726
Unique NameEMLSAP00000005726
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length563
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000175Sodium:neurotransmitter symporterPRINTSPR00176NANEUSMPORTcoord: 426..446
score: 35.21
coord: 49..68
score: 50.82
coord: 292..312
score: 41.45
coord: 470..490
score: 23.89
coord: 20..41
score: 60.13
coord: 346..365
score: 43.03
coord: 93..119
score: 28.6
coord: 210..227
score: 35.52
IPR000175Sodium:neurotransmitter symporterPFAMPF00209SNFcoord: 12..529
e-value: 7.1E-155
score: 516.2
IPR000175Sodium:neurotransmitter symporterPANTHERPTHR11616SODIUM/CHLORIDE DEPENDENT TRANSPORTERcoord: 9..526
IPR000175Sodium:neurotransmitter symporterPROSITEPS00610NA_NEUROTRAN_SYMP_1coord: 36..50
IPR000175Sodium:neurotransmitter symporterPROSITEPS50267NA_NEUROTRAN_SYMP_3coord: 11..534
score: 85.5
NoneNo IPR availableSUPERFAMILY161070SNF-likecoord: 12..528
NoneNo IPR availableTMHMMTMhelixcoord: 210..232
NoneNo IPR availableTMHMMTMhelixcoord: 350..372
NoneNo IPR availableTMHMMTMhelixcoord: 392..414
NoneNo IPR availableTMHMMTMhelixcoord: 93..115
NoneNo IPR availableTMHMMTMhelixcoord: 294..316
NoneNo IPR availableTMHMMTMhelixcoord: 504..526
NoneNo IPR availableTMHMMTMhelixcoord: 259..281
NoneNo IPR availableTMHMMTMhelixcoord: 467..489
NoneNo IPR availableTMHMMTMhelixcoord: 181..203
NoneNo IPR availableTMHMMTMhelixcoord: 424..446
NoneNo IPR availableTMHMMTMhelixcoord: 50..72
NoneNo IPR availableTMHMMTMhelixcoord: 21..40

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000005726 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000005726EMLSAT00000005726-701573Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000005726 ID=EMLSAP00000005726|Name=EMLSAP00000005726|organism=Lepeophtheirus salmonis|type=polypeptide|length=563bp
MSTDKKENEKDRGYWTHPYDFLVTSLGYAVGLGNIWRFPFLCYKHGGGSF
LIPYFIMLILAGLPSLFLEMALGQYAGVSPIKLFGRLSPFLKGLGFSMVT
LGLLFALFYNVVVSWSIWYLVSSFSRCSLKWTNCHNSFNTEKCVPVDKIT
EIPGVSSVEEYFNEFVLGGGANTTWENYGXPRIHSFVCIVFAWMIVGFIC
INGIKSSGKIAYVTTIFPYIILIAIGIRAFTLPGASQGIYFYLMPQWNRL
LTFEIWIDAATQVIFTLGIACGCVITLSSYNNYNRNCQLDAITITFMNAM
TSIFSGFVVFAILGYMAYTRGEDISKVAKGGPGLAFITYPEVVTTMRFSN
IWSFLFFLMLVNLAFGSVVGVFETVLSSITDYWPDLRXKKSRIVACITFI
MMILSIPFSAPGGIHLFTLFNSTVPSWNLLLIIFLEIIGIGWGYGANNFI
NDITNDMKIKVCLPLKLLWLFSWTFATPLVLLCLLVQFWRNYGTVEYNGY
VYPKYIQILGNILTILTLIWIPIFAIKALTSKKGEEESLEPHGKWGRESY
GGVESVSSIESNM
back to top
Add to Basket