snap_masked-scaffold199_size265817-processed-gene-1.0-mRNA-1, snap_masked-scaffold199_size265817-processed-gene-1.0-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold199_size265817-processed-gene-1.0-mRNA-1
Unique Namesnap_masked-scaffold199_size265817-processed-gene-1.0-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold199_size265817supercontigscaffold199_size265817:87828..90736 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
protein alpha isoformsnap_masked-scaffold199_size265817-processed-gene-1.0Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold199_size265817-processed-gene-1.0-mRNA-1:exon:132snap_masked-scaffold199_size265817-processed-gene-1.0-mRNA-1:exon:132Tigriopus kingsejongensisexon
snap_masked-scaffold199_size265817-processed-gene-1.0-mRNA-1:exon:133snap_masked-scaffold199_size265817-processed-gene-1.0-mRNA-1:exon:133Tigriopus kingsejongensisexon
snap_masked-scaffold199_size265817-processed-gene-1.0-mRNA-1:exon:134snap_masked-scaffold199_size265817-processed-gene-1.0-mRNA-1:exon:134Tigriopus kingsejongensisexon
snap_masked-scaffold199_size265817-processed-gene-1.0-mRNA-1:exon:135snap_masked-scaffold199_size265817-processed-gene-1.0-mRNA-1:exon:135Tigriopus kingsejongensisexon
snap_masked-scaffold199_size265817-processed-gene-1.0-mRNA-1:exon:136snap_masked-scaffold199_size265817-processed-gene-1.0-mRNA-1:exon:136Tigriopus kingsejongensisexon
snap_masked-scaffold199_size265817-processed-gene-1.0-mRNA-1:five_prime_utrsnap_masked-scaffold199_size265817-processed-gene-1.0-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
snap_masked-scaffold199_size265817-processed-gene-1.0-mRNA-1:cdssnap_masked-scaffold199_size265817-processed-gene-1.0-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold199_size265817-processed-gene-1.0-mRNA-1:cdssnap_masked-scaffold199_size265817-processed-gene-1.0-mRNA-1:cds-1990653Tigriopus kingsejongensisexon
snap_masked-scaffold199_size265817-processed-gene-1.0-mRNA-1:cdssnap_masked-scaffold199_size265817-processed-gene-1.0-mRNA-1:cds-1990654Tigriopus kingsejongensisexon
snap_masked-scaffold199_size265817-processed-gene-1.0-mRNA-1:cdssnap_masked-scaffold199_size265817-processed-gene-1.0-mRNA-1:cds-1990655Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1990656auto1990656Tigriopus kingsejongensispolypeptide
Tk08934Tk08934Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk08934

>Tk08934 ID=Tk08934|Name=Tk08934|organism=Tigriopus kingsejongensis|type=polypeptide|length=507bp
LVTAALSASNTLTISPSMSAANPLQQYCLKWNNHQANLLRVFDRLLGSEQ
FCDVLVAAEGQTLRAHKVVLSACSSYFETIFNEFSEKNQVIILKDTKFTD
VQALVQFMYKGEINVPQHQLGSLLKTAENLQVKGLADVTSSQEEDQRAPS
PIAEPLPPKPKLIKMEMKPIVMNGSPTPSLKYRLPASGSGEVKRKRGRPR
TLDAPGEQPDPCFAHVKITSATSLPPHSTFIPSRTSPVPPRTPHDLSGVN
EGASTSGSGGREPSPPTPTPGGPLTPERIAELSIIKMPDYLLSGSRQQFW
DEYYVKVIMQAVRNKEIDMKGAAELLGVSYGTLYGRYRETFGYLKHAWNK
PNKSHNAHNPTPVSAAHSPFESTDQDNVLELFRTGRISIKQAATLLGMDP
SLLAYQFTAKMGELQCYNDMKYQGHMNDLDEEEEELDEEPNFDEESYRHE
LQMQEEDEEEETLEVQPDIVLQSHCLKTEDDHIPEQSAPLSLKINVSQGK
DEVKTSS
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mRNA from alignment at scaffold199_size265817:87828..90736+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold199_size265817-processed-gene-1.0-mRNA-1 ID=snap_masked-scaffold199_size265817-processed-gene-1.0-mRNA-1|Name=snap_masked-scaffold199_size265817-processed-gene-1.0-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2909bp|location=Sequence derived from alignment at scaffold199_size265817:87828..90736+ (Tigriopus kingsejongensis)
GGAAGAGAGGCCAGAGAAACCAAGCGAGACACGTAAGTGAACGACGAAGA
AGTAGGTCGGTAATTCAGTCCAGCGCTGGGAAGAAGAAGGGTTTTGGAAA
AATCGATAAACCAATTTTTCGGCCAAAAAGAACAGCTTTCGAGGCTTTCA
GGAGGTGCATGGAATATTACGAGGCGCCTTATCAATATTCCTCTAGCCCC
TCGTTAGTTAGTTGGTGGACGCCAAATTTAAAACACTTTCATGTGCGACG
CGCTGTATGTATTGTGCTGTTCGTCGTGTCCTCTAAGAAGAGTCGAGGTA
ATGCGATATTTAGCAAATCTATGGACAAATTCAATAATTCAACTCTCGAG
AGTGCATGCGATTAGCCCCCCCCCCCCCAAGTGGTCTTCGAAATGCGAAC
TGTAGATAAGAAGGCGCTGCCTGAAGGCCGGTGGAGATAAATGCTAAAAA
TGCTTCACAGCTCGCACGAACTCACCGAGATTACAAAAATATTTTATTTG
AACGTTTTTTCTATAATTCGATAATAGCCTTCAGGCGCCCGTCTCCGCCT
TCAGTCCAGGCAGCAAGCCTCAGTATCAGCGATTGCTAAAATAAGTCACA
TTTGAAAAACTCCCCACCGCCCCACACTTTGGCCGAGATTGTTCAGAAAT
TAGCATCGGATCCTTCCTCCTTCCAGTGGTCACCGCAGCCCTCTCCGCCA
GCAACACACTCACCATCAGTCCCAGCATGTCCGCGGCCAATCCTCTGCAG
CAGTATTGTCTGAAGTGGAACAATCACCAAGCCAATCTCCTACGCGTGTT
CGACCGACTTCTGGGATCCGAGCAGTTCTGCGATGTCCTCGTTGCGGCCG
AGGGCCAGACCCTCCGGGCCCATAAGGTGAGGGGTGTTCGTACGCTAGCA
GGCTCTGAGTGAAGATTTCCTCGAAGTCGAGTTAGTAATCGCTTACAAAT
GGAGCAACACGATCGATCAATCTGGGCAAACCTGTTGTGGTCGACAATTT
GTTACGAAATATTTGGAAAAAAGTTTCACAGCAAGTGTTTCGGCACATTA
CTTGAAATCCTAATCGCGAGAAGGCTGACATTTGTATCCAATAAAAATAT
ACAAAATTTCTTGTGGAGCCCATGTTTGTCAATTTCCTTCCTCAGGTGGT
GCTTTCGGCATGTAGCTCCTATTTCGAGACTATTTTCAACGAGTTCAGCG
AGAAGAATCAGGTCATCATCCTGAAAGACACCAAGTTTACCGATGTCCAG
GCACTCGTTCAATTCATGTACAAAGGCGAGATCAATGTCCCCCAACATCA
GCTGGGATCCCTCTTAAAGACTGCCGAGAACCTTCAGGTCAAAGGATTAG
CCGATGTGACCTCTAGCCAGGAGGAGGATCAGCGAGCTCCTTCTCCCATT
GCGGAGCCATTGCCTCCCAAGCCCAAGCTGATCAAGATGGAAATGAAGCC
GATCGTCATGAATGGCTCACCCACGCCGTCTTTGAAGTACCGGCTACCCG
CCAGCGGGAGCGGCGAGGTGAAACGCAAGCGAGGCCGACCTCGGACCTTG
GATGCCCCCGGAGAGCAGCCCGATCCCTGCTTTGCCCATGTCAAGATCAC
CTCGGCCACCTCGCTCCCGCCCCATTCGACGTTTATACCCTCCCGAACCT
CACCCGTTCCGCCTCGGACCCCTCACGACCTCTCTGGCGTCAACGAAGGA
GCCTCCACCTCTGGGAGTGGGGGTCGAGAGCCCAGTCCACCCACGCCCAC
CCCGGGTGGACCGCTCACTCCTGAGCGCATTGCCGAGCTGAGCATCATTA
AGATGCCCGATTATTTGCTCTCAGGCTCCCGGCAGCAGTTCTGGGACGAG
TACTACGTCAAAGTTATTATGCAGGTAAGGCCAGTCCCTCTCAAGTCTTC
TGAAAACCTGGGTCCTCATTTCGCTTTGGGTGTTTCAGGCTGTTCGGAAC
AAGGAGATCGATATGAAAGGCGCCGCCGAGCTCCTGGGCGTATCTTACGG
AACATTGTACGGTCGATATCGAGAGACTTTTGGATACTTGAAACATGCGT
GGAACAAGCCCAATAAGAGCCACAATGCTCACAACCCCACCCCAGTATCC
GCGGCCCATTCCCCATTCGAATCTACCGATCAGGACAATGTCTTGGAGTT
GTTCAGAACAGGCCGGATCAGCATCAAGCAAGCTGCCACCCTGCTCGGAA
TGGATCCCAGTCTACTCGCTTATCAATTCACAGCTAAGGTAGAGTTGGCA
TACATTTTTTTCCTGCACCCCAACGACAGTCCAACAAGTTATTCGTATGA
TATAATTGCAGATGGGAGAGCTCCAATGCTACAATGACATGAAATATCAA
GGACACATGAACGACCTCGATGAGGAGGAGGAAGAGTTGGACGAAGAGCC
CAACTTTGACGAGGAGTCGTATCGGCATGAGCTCCAAATGCAGGAGGAGG
ATGAAGAGGAAGAAACCCTGGAAGTTCAGCCCGATATCGTTTTGCAGTCC
CATTGCCTTAAAACTGAAGACGACCACATCCCTGAACAGAGTGCACCGCT
CTCCCTCAAGATCAACGTCTCTCAGGGCAAGGATGAGGTCAAGACCTCGT
CATGAGGCGGCCAATGGACTAAAAAGCAGTCATCGCGTATGTACACTAAT
CCGTGCAGACCTACAGCTTCTGTTTGACAATCAATGTTTCGCGCAATTCA
TTTCGTGTCAGTGAGCAGTCCGTTAGTGCTCCTGGCGCCTGCTCGAGAAC
TGATAGCAAAGATATTTAGCATTATCACCACCGTGAACCACGAGTACAAG
TTGAAAATTAAGTGAATTGTTATATATACACACACCATACATACAAGACC
GATAACGCTACACAAGTTTGGTCATTGATTGCCAAGAATGCACGTCAGTT
TCCTCAATT
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