snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1, snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1
Unique Namesnap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1346_size46090supercontigscaffold1346_size46090:33650..38266 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
endoplasmic reticulum aminopeptidase 1snap_masked-scaffold1346_size46090-processed-gene-0.7Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:exon:1424snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:exon:1424Tigriopus kingsejongensisexon
snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:exon:1425snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:exon:1425Tigriopus kingsejongensisexon
snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:exon:1426snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:exon:1426Tigriopus kingsejongensisexon
snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:exon:1427snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:exon:1427Tigriopus kingsejongensisexon
snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:exon:1428snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:exon:1428Tigriopus kingsejongensisexon
snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:exon:1429snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:exon:1429Tigriopus kingsejongensisexon
snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:exon:1430snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:exon:1430Tigriopus kingsejongensisexon
snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:exon:1431snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:exon:1431Tigriopus kingsejongensisexon
snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:exon:1432snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:exon:1432Tigriopus kingsejongensisexon
snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:exon:1433snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:exon:1433Tigriopus kingsejongensisexon
snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:exon:1434snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:exon:1434Tigriopus kingsejongensisexon
snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:cdssnap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:cdssnap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:cds-1972094Tigriopus kingsejongensisexon
snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:cdssnap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:cds-1972095Tigriopus kingsejongensisexon
snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:cdssnap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:cds-1972096Tigriopus kingsejongensisexon
snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:cdssnap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:cds-1972097Tigriopus kingsejongensisexon
snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:cdssnap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:cds-1972098Tigriopus kingsejongensisexon
snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:cdssnap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:cds-1972099Tigriopus kingsejongensisexon
snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:cdssnap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:cds-1972100Tigriopus kingsejongensisexon
snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:cdssnap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:cds-1972101Tigriopus kingsejongensisexon
snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:cdssnap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:cds-1972102Tigriopus kingsejongensisexon
snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:cdssnap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1:cds-1972103Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1972104auto1972104Tigriopus kingsejongensispolypeptide
Tk10768Tk10768Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk10768

>Tk10768 ID=Tk10768|Name=Tk10768|organism=Tigriopus kingsejongensis|type=polypeptide|length=987bp
MWSSRNKILMDTDGDDVAFLSASGDSRHGLYANSKKELYENGAVAQCSKA
QAIALTVFVLSALFLTSLAAAFVKPFNIECPVEEIPEVEVPNTEPELIAT
NGEEFPWDDIRLPAFLIPIRYDIELTPNLTTGWVKGIEKLIFSVKEETNF
IVFHSKNITITSRTMNERLNVERMLEYPFREQIYLETDEYMFPGVSYAIR
IKFQYKLSKHMEGFYLSHYKNKAGQERSLATSHFEPTHARRAFPCFDEPE
LKAKFLVTITHDTDLIAFFNTPKKAVTEVRGKNNLIRDEFEETVEMSTYL
LAFVVCDFQRVKAVTKGGVNVSVIAAPDKINQAQYALQAAVKIMDYYDNF
FGVPYPLEKEDLIAIPDFGAGAMENWGLITYRESALLFSETETSADAQQW
IAVVVAHELAHQWFGNLVTMKWWNDLWLNEGFASWVEYLGVDHIHPEWRM
MDQFFLDMIAPALTLDSLTTSHPISVDVKDPKEIEAIFDTISYKKGAAII
HMLEDTVGEKTIRDGLTHYLQRHKYGNAETDDLWHAISQAWDSSNSSFTV
KEMMDTWTLQMGYPLISFEQQNDTNIYTIRQERFLISMNVNDTEIMERRY
EQAYEWVVPLSYKTDLEDFPTQKIILNKSQTLEQEFPGDMTWFKANLNGT
GYYRVNYPRHNWDALILALNTDHTVFTTADRAQLINDAFALSHAGLLPST
KPLEMITYLLKETDMVPWATALGHLGTWKVTLQETDIVPLINSLIQTLIS
PIYNQIGWEDVGDHMAKLLRKLILQTAVDANMEEARDKALELFTNYQKRG
DRVPPNLKRVTYSSGVRFGGLVEWKFAWDKYKESLVPSEKSIWMRALADS
PHPYILQQYLEASLDRKKIKPQDVTSVLAGVARNPAGTHLAWRHLQMHWD
DLLENFGVGSFIMGSIIESTTSHFSTEFDYEQVQEFFLPRRNHIGSGQRA
LDQSEEQIRINIEWRKDNEADIRRWMLAKVDANAKIF
back to top

mRNA from alignment at scaffold1346_size46090:33650..38266-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1 ID=snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1|Name=snap_masked-scaffold1346_size46090-processed-gene-0.7-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=4617bp|location=Sequence derived from alignment at scaffold1346_size46090:33650..38266- (Tigriopus kingsejongensis)
ACCAAAGAATGTGTAGCACAGCGTGTGCTAATGTGTGACAATGTGGAGCA
GTAGGAATAAGATCCTCATGGACACCGACGGAGACGATGTCGCCTTCTTG
TCCGCCTCGGGTGTGTGTCCCACGGTCCCGCCCATGGGGCATGACACAGG
GGTGTCGGATCTAACCTGCTCTTGGTCTTTTTTTCCAGGCGATAGCAGGC
ACGGTCTTTACGCCAACTCCAAGAAGGAACTCTACGAGAATGGAGCTGTG
GCCCAATGCTCCAAGGCCCAGGCCATTGCTCTCACGGTCTTCGTCTTGTC
GGCCTTGTTTCTCACCTCCCTGGCAGCGGCCTTCGTGAAGCCCTTCAACA
GTAAGACGGAACCCCGCTGAGATAACCAGGTGGAACCCAGGTGTCTAGTG
CACATTGATCACCCTTACCATTGCAGTCGAGTGTCCCGTGGAGGAGATCC
CAGAGGTGGAAGTGCCCAACACCGAGCCGGAATTAATTGCCACCAATGGC
GAGGAGTTCCCTTGGGACGACATTCGTTTGCCCGCTTTCCTCATTCCGAT
CCGATACGACATCGAGCTCACTCCCAACCTGACCACTGGCTGGGTCAAGG
GCATCGAGAAGCTCATCTTCTCGGTCAAGGAGGAGACCAACTTCATTGTG
TTCCACTCGAAGAACATCACCATCACGAGTCGGACCATGAACGAGCGATT
GAACGTGGAGCGCATGCTCGAGTATCCCTTCCGAGAGCAGATCTACTTGG
AGACCGACGAGTACATGTTCCCCGGGGTATCCTACGCCATCAGGATCAAG
TTCCAGTACAAGTTGTCCAAGCACATGGAAGGCTTCTACTTGTCCCACTA
CAAGAACAAAGCCGGTCAAGAGCGATCCTTGGCCACGTCCCACTTCGAGC
CCACTCACGCTCGCAGGGCCTTCCCGTGCTTCGACGAGCCGGAGTTGAAG
GCCAAGTTCCTCGTGACCATCACCCACGACACGGATCTGATTGCCTTCTT
CAACACACCCAAGAAAGCCGTGACCGAGGTCCGAGGCAAGAACAACCTCA
TCCGTGACGAGTTCGAGGAAACCGTCGAGATGAGCACCTACCTCCTGGCC
TTCGTGGTCTGCGACTTTCAGAGGGTCAAGGCCGTCACCAAGGGCGGGGT
GAACGTCTCGGTGATTGCCGCTCCCGACAAGATCAATCAGGCGCAGTATG
CGCTCCAGGCCGCCGTCAAGATCATGGACTACTACGACAACTTCTTTGGC
GTTCCATATCCTCTGGAAAAAGAGGGTAGGAGCAGTGTATGTGTGTCGCT
GTCTATTTCCCACGTGCTCACTCCTTGCCTCTTTGCAGATCTAATTGCCA
TTCCCGATTTTGGCGCCGGTGCCATGGAGAACTGGGGCCTGATCACCTAT
CGAGAGTCCGCGCTTCTGTTCTCCGAGACCGAAACGAGTGCGGATGCTCA
GCAATGGATTGCTGTGGTTGTGGCCCACGAGCTGGCTCACCAATGGTTCG
GCAATCTGGTCACCATGAAATGGTGGAATGATCTTTGGCTGAACGAGGGC
TTCGCGAGCTGGGTCGAGTATCTGTGAGCATTCCTTGAAGCATTTGGTCC
ACGCAGGGCGCTCTCGGTGGAACACAACTCGCTTCTTCTTTTCCAGCGGC
GTGGACCACATTCACCCCGAGTGGCGGATGATGGACCAGTTCTTCTTGGA
CATGATTGCCCCCGCCTTGACGCTCGACTCTCTCACCACGTCCCACCCCA
TCTCGGTGGACGTGAAGGACCCCAAGGAGATCGAGGCCATCTTCGACACG
ATTTCCTACAAGAAGGGAGCGGCCATCATCCACATGCTCGAGGACACTGT
CGGCGAGAAGACCATTCGCGACGGTCTCACCCATTACTTGCAGCGACACA
AGTATGGCAACGCCGAGACGGACGACTTGTGGCACGCCATCTCGCAGGCC
TGGGACTCGTCCAACTCGAGCTTCACGGTCAAGGAGATGATGGATACTTG
GACCCTCCAAATGGGCTATCCACTGATCTCTTTCGAGCAGCAGAATGATA
CCAACATCTACACCATTAGACAAGAGCGATTTCTCATCTCTATGAATGTG
AGTGAAAAAGATGACCTCGGAACAGTCATTCATCCGAGGGGGGACCTTGG
GACTTTACGACATGGTGGCTTTCTCTCAAGCCACATTTATGAGCTCAGAG
CAAACAAAAAGAGCGCCCACGAAAGGGAGAGAGAGGAGAGAGAGAGAGAG
AGAGCCATAAAATTCGCAATGATCCATTTCGCTCCAAATCTCCAGGTCAA
CGACACCGAGATCATGGAGCGCCGATACGAACAAGCCTACGAGTGGGTGG
TCCCACTCAGCTATAAGACCGACTTGGAGGACTTTCCCACGCAGAAGATC
ATCTTGAACAAGAGCCAAAGTAGCCCATGGAAATGGCCTAGTCCTTTGAT
CTAGGAGGATGCATATACTGTAACTCATTTCTTACAGCGCTCGAGCAAGA
ATTTCCGGGTGACATGACCTGGTTCAAGGCCAATCTGAATGGAACCGGCT
ACTACCGAGTCAATTATCCTCGGCACAATTGGGATGCCCTCATATTGGCT
CTCAACACGGATCACACCGTGTTCACCACTGCAGATCGGGCCCAGTTGAT
CAACGATGCATTCGCTCTGTCCCAGTAAGGCCTATTTCCCGGCTCAGCTA
CCTGAGCCCACTGGAGCTAATCCCTCACATATCCCTCCAGTGCCGGTCTC
CTACCCTCCACCAAGCCGCTCGAAATGATCACGTATCTGCTCAAGGAGAC
GGACATGGTGCCTTGGGCCACGGCGCTCGGACACCTGGGAACATGGAAGG
TGACCCTTCAGGAGACCGACATTGTTCCCCTGATCAACAGCCTCATCCAG
ACCCTGATCTCGCCCATCTACAACCAGATCGGGTGGGAGGACGTTGGCGA
TCACATGGCAAAGTGAGACACGACACGGAGGGCCAGGCCCGACGGACCAC
ACCACATACCATGCGGTTTATCTTCCAGGCTCTTGAGGAAGTTGATCCTC
CAAACGGCGGTGGATGCGAACATGGAAGAGGCCAGGGATAAGGCTCTGGA
GCTGTTCACCAATTACCAGAAACGCGGGGACAGAGTGCCACCCAACCTCA
AGCGGGTCACCTACTCGTCCGGCGTGCGATTTGGCGGGTTGGTGGAGTGG
AAGTTTGCCTGGGACAAGTACAAGGAGAGCTTGGTGCCCAGCGAGAAGAG
CATTTGGATGCGAGCTCTGGCCGATTCGCCCCATCCCTACATCTTGCAAC
AGTGGGTGCACGCCAACCCGGCCTAAGCCACACCGGATCCTCCAATCGCC
CGTCTCTCTTTCAGGTATTTGGAGGCCAGCTTGGACCGGAAGAAGATCAA
GCCTCAGGACGTGACCTCGGTTCTGGCGGGCGTGGCCCGCAATCCGGCCG
GTACCCATCTCGCTTGGCGCCACCTCCAAATGCATTGGGACGATCTCTTG
GAGAACTTTGGCGTGGGCTCGTTCATCATGGGATCCATCATCGAATCCAC
GACATCGCATTTCTCCACTGAATTCGACTACGAGCAGGTACGGCTTCAAA
AATAGGGATAGAGCGTGGGTTTGGCGGTCCCTAACCATTGAACAAAGCAA
GGTTTGGCAGAGACGCAGTCAACCGCGTGGCACTTAAATATTGGGATGAA
AGTATGCATTTCACTCGTTGCCCTTGTTTAATTCAAATTGGTCCCGTTCA
TAAGGCAAGACTTGTCTAAGGACCTCGTTAGTGATGGGACGAGAAACACA
GATACGACAGCGGAACTCGTTGGGGGCCAAAGTATCTTTATTCAGTGTCC
GTTTGTTTATGGACAAAAATTAAGACCCTATTTTGACGGATTCTAAATGA
AACGAAAAAAAAATGAGCACAAAATTATCAATTTGGGTCCTTTTTGAATT
CAAAACCGTTGTATAGTCAATCCACGTCTTCTCATACATACCTACAGTAT
TATGGGATTCATCACCAAAGCAAACCAGAGCTAAAGAAAAGTGATTTTGA
ACCAGAAAAGATCGAGCCCCCCTCAAAACATTTGTAAGGACCCTGCATCG
TAGAAGTCCCAGCCGTCATGTGGGGCTCTATAGGCTGGCTTTTTGAAGTT
GCCCTCTCAATTTCATTCGCTAAATGTCGAGCCCGATGGTCCAAGACGGT
GAGGAATATCTCTCAAGCCAACACGCCTAAACAGTCATTTGCTTCGCTTT
GAAACTTGAAAACTGTTCAAATTTGAGCAGTCACAATTATCGATTCACTC
GGAACGCAATGATTAGCCCACTCAGTCCGAGTGAGCTAATCATTGGCCAG
TCTGGCCTAGGCCGCAGGTATCTATTAATGGGGATGTCTTTTTTCATGTC
CCGGGTGAATCTCACTGTCCCAGAGTCACACGGTTTTCTTTCATTCCAGG
TCCAGGAGTTCTTCCTCCCGCGTCGGAATCACATTGGATCGGGACAGCGG
GCCTTGGATCAGAGCGAGGAGCAGATTCGGATCAATATCGAGTGGCGCAA
GGACAATGAGGCCGACATCCGGCGTTGGATGCTCGCCAAGGTGGATGCGA
ATGCCAAAATCTTCTAG
back to top
Add to Basket