maker-scaffold390_size186308-snap-gene-0.34-mRNA-1, maker-scaffold390_size186308-snap-gene-0.34-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold390_size186308-snap-gene-0.34-mRNA-1
Unique Namemaker-scaffold390_size186308-snap-gene-0.34-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold390_size186308supercontigscaffold390_size186308:86138..88174 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
polymorphic outer membrane protein g i familymaker-scaffold390_size186308-snap-gene-0.34Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold390_size186308-snap-gene-0.34-mRNA-1:exon:1210maker-scaffold390_size186308-snap-gene-0.34-mRNA-1:exon:1210Tigriopus kingsejongensisexon
maker-scaffold390_size186308-snap-gene-0.34-mRNA-1:exon:1211maker-scaffold390_size186308-snap-gene-0.34-mRNA-1:exon:1211Tigriopus kingsejongensisexon
maker-scaffold390_size186308-snap-gene-0.34-mRNA-1:exon:1212maker-scaffold390_size186308-snap-gene-0.34-mRNA-1:exon:1212Tigriopus kingsejongensisexon
maker-scaffold390_size186308-snap-gene-0.34-mRNA-1:exon:1213maker-scaffold390_size186308-snap-gene-0.34-mRNA-1:exon:1213Tigriopus kingsejongensisexon
maker-scaffold390_size186308-snap-gene-0.34-mRNA-1:exon:1214maker-scaffold390_size186308-snap-gene-0.34-mRNA-1:exon:1214Tigriopus kingsejongensisexon
maker-scaffold390_size186308-snap-gene-0.34-mRNA-1:exon:1215maker-scaffold390_size186308-snap-gene-0.34-mRNA-1:exon:1215Tigriopus kingsejongensisexon
maker-scaffold390_size186308-snap-gene-0.34-mRNA-1:exon:1216maker-scaffold390_size186308-snap-gene-0.34-mRNA-1:exon:1216Tigriopus kingsejongensisexon
maker-scaffold390_size186308-snap-gene-0.34-mRNA-1:three_prime_utrmaker-scaffold390_size186308-snap-gene-0.34-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
maker-scaffold390_size186308-snap-gene-0.34-mRNA-1:cdsmaker-scaffold390_size186308-snap-gene-0.34-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold390_size186308-snap-gene-0.34-mRNA-1:cdsmaker-scaffold390_size186308-snap-gene-0.34-mRNA-1:cds-1990249Tigriopus kingsejongensisexon
maker-scaffold390_size186308-snap-gene-0.34-mRNA-1:cdsmaker-scaffold390_size186308-snap-gene-0.34-mRNA-1:cds-1990250Tigriopus kingsejongensisexon
maker-scaffold390_size186308-snap-gene-0.34-mRNA-1:cdsmaker-scaffold390_size186308-snap-gene-0.34-mRNA-1:cds-1990251Tigriopus kingsejongensisexon
maker-scaffold390_size186308-snap-gene-0.34-mRNA-1:cdsmaker-scaffold390_size186308-snap-gene-0.34-mRNA-1:cds-1990252Tigriopus kingsejongensisexon
maker-scaffold390_size186308-snap-gene-0.34-mRNA-1:cdsmaker-scaffold390_size186308-snap-gene-0.34-mRNA-1:cds-1990253Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1990254auto1990254Tigriopus kingsejongensispolypeptide
Tk06351Tk06351Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk06351

>Tk06351 ID=Tk06351|Name=Tk06351|organism=Tigriopus kingsejongensis|type=polypeptide|length=537bp
MTVTLNCWILLNAAVWSGAHPQLGHVPSRGPPFNPQDSPNLEERMLQHFS
TNEHPFFSWTLGEEKQPKMSIHYSLHESDQILLAPHDPMPDVPKERKSSC
NYLGRLANDTRATLAVTGCLGIEPTEVTVLGTRHKGAFLLSGDEVEEIPL
SMPEGPESRMSIELPDALDWILMEGDELMLITDEKKILLMEQICPLGACT
DLPPFHELTIQVGYDTTFFNKVPNPEEWISQVLTHAQAHFYHPSLLVQIR
LKILGAPKKFPEHSWRASTSDLKVARTAVMAESKANLYVLFCDDPEYFGT
VGIAFVGGVCSTNGLHLSLNEWRNTIAGSARVVAHEIGHNLGMNHDFSAK
YKSRGCTGIMDYGDSPAIWSKCSQEDFRSTYRLELSKRGQHCMATLDVSP
DDGTYTPPEVPKEQEGIKTDDGKFTCPAPLWRGDGYCDDMNNVKACGFDA
GDCCDKRTAAWNAFCVKCECVGPNITTTTPKPMKVDLCPSPHFKGDGFCD
DNNNLAACQYDGGDCCSRRKNWNFFCQECKCIGSKVP
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mRNA from alignment at scaffold390_size186308:86138..88174-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold390_size186308-snap-gene-0.34-mRNA-1 ID=maker-scaffold390_size186308-snap-gene-0.34-mRNA-1|Name=maker-scaffold390_size186308-snap-gene-0.34-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2037bp|location=Sequence derived from alignment at scaffold390_size186308:86138..88174- (Tigriopus kingsejongensis)
ACTCGACGATGACAGTCACTCTAAATTGCTGGATTCTACTTAATGCCGCA
GTCTGGTCCGGGGCTCATCCGCAACTGGGCCATGTTCCCTCTCGGGGACC
ACCGTTTAACCCACAAGACTCGCCCAATTTAGAGGAGAGAATGCTGCAAC
ACTTCTCGACCAACGGTAATAACTATGAGTTGTAACCTTCGTCTAGACAG
TTTCTAATTACATTTGTCTTCTTCAGAGCATCCCTTTTTTAGTTGGACGC
TGGGTGAGGAGAAGCAACCGAAAATGAGCATTCATTACAGCCTCCACGAG
TCGGACCAGATCTTGCTTGCACCCCATGATCCCATGCCAGATGTTCCCAA
AGAGAGGAAATCCTCTTGCAACTATCTTGGGCGATTGGCCAACGACACAA
GAGCCACTTTGGCCGTGACGGGTTGCCTTGGTATCGAGCCAACTGAGGTG
ACCGTCCTGGGAACCAGGCATAAGGGTGCCTTTCTTCTGTCGGGAGATGA
GGTAGTTTAGTCAACCCATCAATTCATGAACAATTCATTCAGTCATCTGC
AAATCTTCAGGTGGAGGAAATTCCATTGTCCATGCCGGAGGGGCCGGAAT
CTCGAATGTCCATTGAACTCCCCGACGCATTGGATTGGATCCTCATGGAA
GGTGATGAGCTGATGCTGATCACAGATGAGAAGAAGATCCTGCTCATGGA
GCAGATTTGTCCCTTGGGAGCGTGCACTGACCTACCACCCTTTCATGAGC
TCACCATACAGGTTGGCTACGATACAACATTCTTCAATAAAGTGCCCAAT
CCCGAGGAGTGGATCTCTCAAGTCCTGACCCACGCTCAAGCCCACTTTTA
TCATCCCTCTTTGTTGGTCCAAATCCGACTCAAGGTAAGGCACAAGAATA
ATTAGCTCCAAGATTGATCTCAAAAGCTGAATTTGTTTCATTTTTGCATG
GAACAGATACTGGGAGCACCCAAAAAGTTTCCTGAGCATTCCTGGAGAGC
GAGCACCAGCGATCTGAAGGTAGCCAGGACAGCTGTCATGGCTGAGTCCA
AGGCCAACCTCTACGTTCTCTTCTGTGACGATCCAGAGTATTTTGGAACT
GTCGGCATTGCGTTCGTTGGTGGAGTGTGTTCCACCAATGGTCTCCATTT
GTCGCTGAATGAGTGGAGAAACACAATTGCTGGATCCGCCAGGGTAAGTT
CTGCCAATCTATTTCAAAACTTATCTGTTTGACAAATGTGGGTGGTATTT
TCTTCAGGTGGTGGCCCATGAAATAGGCCACAACTTGGGAATGAATCACG
ACTTCTCGGCCAAGTACAAATCCAGAGGCTGCACAGGGATCATGGACTAC
GGAGACTCACCAGCCATTTGGTCCAAATGTTCCCAGGAAGACTTCAGAAG
CACATATCGATTGGAGCTCTCCAAACGAGGACAGCATTGCATGGCGAGTG
AGTTCCATGCCACTGAAACCAAGCTCAGTAGGCCGGCTAGGTATCTGAAG
ATAACAAAGCACCCTATTATTTGACAGCTTTGGATGTGTCTCCGGACGAT
GGAACCTACACTCCCCCTGAGGTTCCCAAAGAGCAAGAAGGGATCAAGAC
CGACGATGGCAAGTTCACTTGTCCTGCACCACTGTGGCGAGGTGATGGAT
ACTGCGATGACATGAACAACGTCAAGGCCTGCGGGTTCGATGCGGGGGAT
TGTTGTGACAAACGAACGGCGGCTTGGAATGCTTTTTGTGTGGTAAGTCA
ATCATAAAGGGGTCCTTTAATGTCCATGCTGAGGGATGTTATCTTAATTC
CTTTGACAGAAATGCGAATGTGTCGGCCCTAATATCACCACTACCACACC
CAAGCCCATGAAGGTCGATCTCTGCCCGTCTCCCCATTTCAAGGGCGATG
GATTCTGCGACGATAACAATAATCTCGCCGCATGCCAATACGATGGAGGT
GATTGTTGTAGCCGGCGCAAAAATTGGAATTTCTTCTGTCAGGAGTGCAA
ATGCATCGGCTCGAAAGTACCTTAGGTGATGGATGGA
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