PREDICTED: L-selectin, maker-scaffold424_size175595-snap-gene-0.30 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of PREDICTED: L-selectin vs. L. salmonis genes
Match: EMLSAG00000003466 (supercontig:LSalAtl2s:LSalAtl2s18:1138333:1258359:1 gene:EMLSAG00000003466 transcript:EMLSAT00000003466 description:"augustus_masked-LSalAtl2s18-processed-gene-12.0") HSP 1 Score: 184.111 bits (466), Expect = 3.010e-59 Identity = 89/188 (47.34%), Postives = 119/188 (63.30%), Query Frame = 0 Query: 8 LFMLFGVVVFIVGVCGNCEFEAQIHKLTTDRKLHYSWRDNPDRDFSWTQGRKYCKSRCMDLVSIDT-YEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCEWGPRGGLGKPQPDNRELYSKGRDEACVAVLNNLYKDGIKWHDIACHQRKFIICES 194 LF+++ + VC N QIH ++ H+SW+ + + F+W QGR YC++ CMDL+S+D W ++S + +DI +IWT GRKCN++GCD QP I NGWFW S+K I NPF + C C W G PQPDNRE + GRDE C+AVLNN+Y DGI WHD+ACH +K +ICES Sbjct: 37 LFLVYFLPYTQGHVCTN-----QIHTMSDISSYHFSWKVDSQKTFTWQQGRDYCRTLCMDLLSLDDGVTEWNAMKSFLIRDDIPYIWTSGRKCNFKGCDHFSLQPPITNGWFWASNKIRIPNPF-ASKCQHCVWSKTG----PQPDNREGITAGRDEXCLAVLNNVYNDGITWHDVACHHKKPVICES 214
BLAST of PREDICTED: L-selectin vs. L. salmonis genes
Match: EMLSAG00000010831 (supercontig:LSalAtl2s:LSalAtl2s71:261472:278274:-1 gene:EMLSAG00000010831 transcript:EMLSAT00000010831 description:"augustus_masked-LSalAtl2s71-processed-gene-2.2") HSP 1 Score: 134.806 bits (338), Expect = 5.866e-40 Identity = 68/169 (40.24%), Postives = 95/169 (56.21%), Query Frame = 0 Query: 31 IHKLTTDRKLHYSWRDNPDRDFS--WTQGRKYCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCEWGPRGGLGKPQPDNRELYSKG-RDEACVAVLNNLYKDGIKWHDIACHQRKFIICESFD 196 IH ++ +SW + ++ S W C+ CMD VSI+T E + + + + +F WT GRKC++ GCD+P QP NGWFW S + + R +W GG G+ QPDNRE KG +E+C+AV+NN Y DGI WHDIAC+ +K +CES D Sbjct: 45 IHASFGGKQYFFSWEYSLTQNLSVNWITAXNICRRHCMDTVSIETLEENQFIENRMLLTGTRFTWTSGRKCDFEGCDRPDLQPTHINGWFWSGSGVRLGS---RNGRVEGDWSNTGGDGEAQPDNREFRVKGEHEESCIAVMNNFYNDGIVWHDIACYHKKPFVCESSD 210
BLAST of PREDICTED: L-selectin vs. L. salmonis genes
Match: EMLSAG00000002645 (supercontig:LSalAtl2s:LSalAtl2s1534:3975:5135:-1 gene:EMLSAG00000002645 transcript:EMLSAT00000002645 description:"augustus_masked-LSalAtl2s1534-processed-gene-0.4") HSP 1 Score: 129.028 bits (323), Expect = 2.278e-37 Identity = 73/179 (40.78%), Postives = 97/179 (54.19%), Query Frame = 0 Query: 41 HY--SWRD--NPDRDFSWTQGRKYCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNY--RGCDQPRFQPAIENGWFWVSSKKSISNPFD-RTACTFCEWGPRGGLGKPQPDNRELYSKG-------------------RDEACVAVLNNLYKDGIKWHDIACHQRKFIICE 193 HY SWR+ + D+ W R +C+ RCMDL+S+++ ++ + +E + IK IWT GRKCN+ +GCD+P+FQP GWFW + S P + R T+ W G KPQPDN E G DEAC+ VLNN +KDGI WHD ACH R I+CE Sbjct: 56 HYFLSWREPWHKFEDWDWFNARSFCRERCMDLISLESSTEFKMFQEVMEQDKIKSIWTSGRKCNFQGKGCDKPKFQPINVRGWFWSGAGNSRLPPTNKRNKNTY--WSKTGKAKKPQPDNFEGLKAGXLTNVTDPVGLTIEGLQEWHDEACLIVLNNAFKDGISWHDSACHIRSPIVCE 232
BLAST of PREDICTED: L-selectin vs. L. salmonis genes
Match: EMLSAG00000000915 (supercontig:LSalAtl2s:LSalAtl2s115:403109:404569:-1 gene:EMLSAG00000000915 transcript:EMLSAT00000000915 description:"augustus_masked-LSalAtl2s115-processed-gene-5.0") HSP 1 Score: 127.872 bits (320), Expect = 1.559e-36 Identity = 70/177 (39.55%), Postives = 97/177 (54.80%), Query Frame = 0 Query: 43 SWRD--NPDRDFSWTQGRKYCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNY--RGCDQPRFQPAIENGWFWVSSKKS-ISNPFDRTACTFCEWGPRGGLGKPQPDNRELYSKG------------------RDEACVAVLNNLYKDGIKWHDIACHQRKFIICESFD 196 SWR+ + D+ W GR +C+ RCMDL+S DT E ++T ++ +++ I+T GRKCN+ +GCD QP NGWFW + + I + +T+ T+ W G G+ QPDN E +G DEAC+A LNN Y DGI WHD+ACH R I+CE D Sbjct: 11 SWREPWHKFEDWDWFNGRNFCRDRCMDLISFDTPEEFKTFAKIMQADNVSSIYTSGRKCNFKGKGCDASHLQPINANGWFWAGAGNTRIPDTSSQTSNTY--WSFTGEQGQKQPDNFEGVKEGPIETEFDIGVTIEGLQEFHDEACLAALNNKYNDGISWHDVACHFRSVIVCEDSD 185
BLAST of PREDICTED: L-selectin vs. L. salmonis genes
Match: EMLSAG00000001607 (supercontig:LSalAtl2s:LSalAtl2s127:8943:10420:1 gene:EMLSAG00000001607 transcript:EMLSAT00000001607 description:"maker-LSalAtl2s127-augustus-gene-0.12") HSP 1 Score: 112.079 bits (279), Expect = 1.801e-30 Identity = 70/190 (36.84%), Postives = 98/190 (51.58%), Query Frame = 0 Query: 25 CEFEAQIHKLTTDRKLHYS---------WRDNP----DRDFSWTQGRKYCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCN--YRGCD-QPRFQPAIENGWFWVSSKKSISNPFDRTAC--TFCEWGPRGGLGKPQPDNRELYSKG-RDEACVAVLNNLYKDGIKWHDIACHQRKFIICESF 195 C EA + +R HYS W N + ++W GR YC+ CMD++S+++ + IK I T GR C+ GCD QPRFQP NGWFW ++ + + P + + F W P G G+PQPD EL S G EAC+A+L+N Y DG++WHD C+ R+ I+CE Sbjct: 93 CLPEANLCSTRKERVGHYSFNGKSYWASWVSNEPALRNARWNWFTGRNYCRKMCMDMISLESQAEQNFAADLMRASGIKDIPTSGRLCDAEVEGCDKQPRFQPLKINGWFWXATLQMMP-PTNSPSNGRVFNNWSPTGPAGQPQPDG-ELKSDGFGKEACMALLDNKYGDGVRWHDEPCNNRRVILCEDL 280
BLAST of PREDICTED: L-selectin vs. L. salmonis genes
Match: EMLSAG00000010141 (supercontig:LSalAtl2s:LSalAtl2s66:535673:559564:-1 gene:EMLSAG00000010141 transcript:EMLSAT00000010141 description:"maker-LSalAtl2s66-snap-gene-5.20") HSP 1 Score: 102.449 bits (254), Expect = 7.478e-28 Identity = 57/153 (37.25%), Postives = 84/153 (54.90%), Query Frame = 0 Query: 53 SWTQGRKYCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCE--WGPRGGLGK-------PQPDNRELYSKG---RDEACVAVLNNLYKDGIKWHDIACHQRKFIICE 193 +W R C+ CMDL+SI++ ++ + ++ ++ +WT GR CN++GCD+P QP N WFW S + I + T + E W G +G+ PQPDN E K EAC+++ NN Y DGI WHD AC+++K ICE Sbjct: 16 NWLDARNLCRELCMDLISIESPIENELIQQIIAEKGLRDVWTSGRLCNFKGCDKPHLQP--RNVWFWSGSGERIY-ATNSTPPGWPEKPWSRTGYIGQFLENRDVPQPDNAEYLLKPDLVNVEACLSINNNWYDDGIAWHDSACYRKKSFICE 165
BLAST of PREDICTED: L-selectin vs. L. salmonis genes
Match: EMLSAG00000009947 (supercontig:LSalAtl2s:LSalAtl2s64:564480:569869:1 gene:EMLSAG00000009947 transcript:EMLSAT00000009947 description:"maker-LSalAtl2s64-augustus-gene-5.19") HSP 1 Score: 93.5893 bits (231), Expect = 2.208e-24 Identity = 47/116 (40.52%), Postives = 65/116 (56.03%), Query Frame = 0 Query: 86 DEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTAC--TFCEWGPRG------GLGKPQPDNRELYSKGRDEACVAVLNNLYKDGIKWHDIACHQRKFIICE 193 ++++ +IWT GRKCN++GC++ QP GW W S ++ P + T F W G G PQPDN E DEAC+ LN++Y DG+ WHDIAC+ +K ICE Sbjct: 58 NQELPYIWTSGRKCNFKGCEREDLQPVNVYGWXWSGSGVKMA-PTNSTPPGWDFQPWSFTGHKTSFAGKNIPQPDNAEYEINQSDEACMGFLNDIYNDGVTWHDIACYHKKSYICE 172
BLAST of PREDICTED: L-selectin vs. L. salmonis genes
Match: EMLSAG00000006435 (supercontig:LSalAtl2s:LSalAtl2s351:588545:589440:-1 gene:EMLSAG00000006435 transcript:EMLSAT00000006435 description:"maker-LSalAtl2s351-snap-gene-6.35") HSP 1 Score: 76.2554 bits (186), Expect = 3.952e-17 Identity = 46/151 (30.46%), Postives = 69/151 (45.70%), Query Frame = 0 Query: 47 NPDRDFSWTQGRKYCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCEWGPRGGLGK----PQPDNRELYSKGRDEACVAVLNNLYKDGIKWHDIACHQRKFIICE 193 N +F+ + YC++ +S+DT + + + + +++WTGGR + G W S + R W GG K PQPDNR+ +E C+A+LNN Y DGI+WHD+ACH RK IC+ Sbjct: 147 NGXSNFTAQEADDYCRANAGRAISLDTTDKANYINNILAQNAQRYLWTGGRIDHNAGV------------VTWPSGAREGYQRGKRF------WSYTGGASKTEDVPQPDNRD-----GNEVCIAILNNFYADGIRWHDVACHHRKPTICQ 274
BLAST of PREDICTED: L-selectin vs. L. salmonis genes
Match: EMLSAG00000004246 (supercontig:LSalAtl2s:LSalAtl2s222:41948:42649:-1 gene:EMLSAG00000004246 transcript:EMLSAT00000004246 description:"maker-LSalAtl2s222-augustus-gene-0.18") HSP 1 Score: 74.3294 bits (181), Expect = 6.123e-17 Identity = 53/175 (30.29%), Postives = 81/175 (46.29%), Query Frame = 0 Query: 21 VCGNCEFEAQIHKLTTDRKLHYSWRDNPDRDFSWTQGRKYCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCEWGPRGGLGKPQPDNRELYSKGRDEACVAVLNNLYKDGIKWHDIACHQRKFIICESF 195 GN +FE + + L SWRD + G YC+ + M L+S+D+ + +++E I++ WTGG +G ENG ++ IS R + + G RG PQPD E C+A+L N+Y DG+K+HD+ CH +K +ICE Sbjct: 71 TVGNYDFEGKRYLL--------SWRDG-RSSLDHSAGSSYCRGKGMRLISLDSSSKINHFFNLLQNERIEYFWTGGSISRDKGT------LTWENG-----QREGIS----RGVFPWSDKGRRG----PQPDGVN------SENCLAILKNVYNDGVKFHDVGCHFQKPVICEQL 211
BLAST of PREDICTED: L-selectin vs. L. salmonis genes
Match: EMLSAG00000006192 (supercontig:LSalAtl2s:LSalAtl2s338:64951:65840:1 gene:EMLSAG00000006192 transcript:EMLSAT00000006192 description:"maker-LSalAtl2s338-augustus-gene-0.3") HSP 1 Score: 71.633 bits (174), Expect = 7.270e-17 Identity = 44/129 (34.11%), Postives = 62/129 (48.06%), Query Frame = 0 Query: 66 MDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCEWGPRGGLGKPQPDNRELYSKGRDEACVAVLNNLYKDGIKWHDIACHQRKFIICES 194 M +S+D+ + + ++ WTGG K N+R + W + + S + PF W P G PQPDNRE +E C+AVLNN Y DGIK+HD++CH K ICE+ Sbjct: 1 MKAISLDSNAKAEETFRLLAKDTQRYYWTGG-KVNHR-----------DQSVTWPNGQTSRNIPF---------WSPTGARRVPQPDNRE-----GNEFCLAVLNNFYSDGIKYHDVSCHHVKPTICEA 103
BLAST of PREDICTED: L-selectin vs. nr
Match: gi|1325290130|ref|XP_023329619.1| (uncharacterized protein LOC111702233 isoform X1 [Eurytemora affinis]) HSP 1 Score: 167.162 bits (422), Expect = 8.444e-49 Identity = 82/197 (41.62%), Postives = 116/197 (58.88%), Query Frame = 0 Query: 7 SLFMLFGVV------VFIVGVCGNCEFEAQIHKLTTDRKLHYSWRDNPDR-DFSWTQGRKYCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCEWGPRGGLGKPQPDNRELYSKGRDEACVAVLNNLYKDGIKWHDIACHQRKFIICESFD 196 S + LF ++ F++ CE IH + H+SW + + + W R YC+ CMD +SID+ V + ++ EDI +IWTGGRKCN+ GCD+P QPAIENGW+W S+ I +P C +C+W GGL QPDNRE+ G+DEAC+ +LNN Y+DG+KWHD+ C +K +IC+ D Sbjct: 6 SGYFLFSLISISFSQTFVLPDGKACENRI-IHADRFGKAYHFSWLEAGEHTKWDWEGARNYCRKFCMDSISIDSRPESDWVNTLLQREDIPYIWTGGRKCNFAGCDRPDLQPAIENGWYWASTGSRIPSP---KKCRYCDWSHTGGLKTNQPDNREMKQGGKDEACIGILNNFYEDGVKWHDVECRHKKPVICQDSD 198
BLAST of PREDICTED: L-selectin vs. nr
Match: gi|1325290137|ref|XP_023329620.1| (uncharacterized protein LOC111702233 isoform X2 [Eurytemora affinis]) HSP 1 Score: 157.532 bits (397), Expect = 1.084e-45 Identity = 69/137 (50.36%), Postives = 93/137 (67.88%), Query Frame = 0 Query: 60 YCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCEWGPRGGLGKPQPDNRELYSKGRDEACVAVLNNLYKDGIKWHDIACHQRKFIICESFD 196 YC+ CMD +SID+ V + ++ EDI +IWTGGRKCN+ GCD+P QPAIENGW+W S+ I +P C +C+W GGL QPDNRE+ G+DEAC+ +LNN Y+DG+KWHD+ C +K +IC+ D Sbjct: 16 YCRKFCMDSISIDSRPESDWVNTLLQREDIPYIWTGGRKCNFAGCDRPDLQPAIENGWYWASTGSRIPSP---KKCRYCDWSHTGGLKTNQPDNREMKQGGKDEACIGILNNFYEDGVKWHDVECRHKKPVICQDSD 149
BLAST of PREDICTED: L-selectin vs. nr
Match: gi|1183212635|ref|XP_020706519.1| (uncharacterized protein LOC105683288 isoform X2 [Athalia rosae]) HSP 1 Score: 157.918 bits (398), Expect = 1.554e-45 Identity = 71/170 (41.76%), Postives = 101/170 (59.41%), Query Frame = 0 Query: 27 FEAQIHKLTTDRKLHYSWRD--NPDRDFSWTQGRKYCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCEWGPRGGLGKPQPDNRELYSKGRDEACVAVLNNLYKDGIKWHDIACHQRKFIICES 194 F IH+ + +YSW D ++ W GR +C+ RCMDLVS++T ++S + ++K+IWT GR C+++GCD+P QP NGWFW + + ++ DR +W P GG+G+PQPDNRE G E C+AVLN Y DG+ WHD+ACH K +CE Sbjct: 3 FAGVIHERFNGKGYYYSWADQRTNGKEVDWLAGRNFCRQRCMDLVSLETSPENEFIKSRIVKNNVKYIWTSGRLCDFKGCDRPDLQPLKVNGWFWTAELQKLAPTIDREQ---NDWSPSGGIGQPQPDNREALQGGAPENCLAVLNQFYNDGVNWHDVACHHVKPWVCEE 169
BLAST of PREDICTED: L-selectin vs. nr
Match: gi|998516141|ref|XP_015518838.1| (PREDICTED: uncharacterized protein LOC107223617 [Neodiprion lecontei]) HSP 1 Score: 158.688 bits (400), Expect = 2.205e-45 Identity = 71/168 (42.26%), Postives = 102/168 (60.71%), Query Frame = 0 Query: 31 IHKLTTDRKLHYSWRDN--PDRDFSWTQGRKYCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCEWGPRGGLGKPQPDNRELYSKGRDEACVAVLNNLYKDGIKWHDIACHQRKFIICESFD 196 IH+ + ++SW D+ ++ W R +C+ RCMDLVS++T ++S + +IK+IWT GR C+++GCD+P QP NGWFW + + ++ DR +W P GG+GKPQPDNRE G E C+AVLN Y DG+ WHD+ACH +K +CE D Sbjct: 40 IHERFNGKGYYFSWADSRTAGQEIDWLAARNFCRQRCMDLVSLETSAENEFIKSRIVQNNIKYIWTSGRLCDFKGCDRPDLQPPNINGWFWTAELQKLAPTTDRNQ---NDWSPSGGIGKPQPDNREALQGGAPENCLAVLNQFYNDGVNWHDVACHHKKSWVCEEND 204
BLAST of PREDICTED: L-selectin vs. nr
Match: gi|665809605|ref|XP_008553179.1| (PREDICTED: uncharacterized protein LOC103575248 [Microplitis demolitor]) HSP 1 Score: 158.303 bits (399), Expect = 3.121e-45 Identity = 77/208 (37.02%), Postives = 113/208 (54.33%), Query Frame = 0 Query: 9 FMLFGVVVFIVGVCGNCEFEAQ------------------IHKLTTDRKLHYSWRD--NPDRDFSWTQGRKYCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCEWGPRGGLGKPQPDNRELYSKGRDEACVAVLNNLYKDGIKWHDIACHQRKFIICESFD 196 F++ GV++ +F+AQ IH+ + +YSW D ++ W GR +C+ RCMDL+S++TY+ ++S + +K+IWT GR C++ GCD+P QP NGWFW + + ++ DR +W GG+GKPQPDNRE G E C+AVLN Y DG+ WHD+ACH +K +CE D Sbjct: 4 FIILGVLI----AAATGQFQAQPSGRILEPPIPPLCAQRTIHERFNGKGYYYSWADPRTAGQEVDWLSGRNFCRQRCMDLISLETYKENEFIKSRIVQNKVKYIWTSGRLCDFNGCDRPDLQPLNINGWFWTAELQKLAPTTDRNQ---NDWSESGGIGKPQPDNREAIQGGAPENCLAVLNQFYNDGVNWHDVACHHKKPWVCEEND 204
BLAST of PREDICTED: L-selectin vs. nr
Match: gi|1036956055|ref|XP_017120510.1| (PREDICTED: uncharacterized protein LOC108141574 [Drosophila elegans]) HSP 1 Score: 158.303 bits (399), Expect = 3.248e-45 Identity = 82/205 (40.00%), Postives = 117/205 (57.07%), Query Frame = 0 Query: 9 FMLFGVVVFIVGVCGNCEFE------------AQ--IHKLTTDRKLHY-SWRDNPDRDFS--WTQGRKYCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCEWGPRGGLGKPQPDNRELYSKGRDEACVAVLNNLYKDGIKWHDIACHQRKFIICESFD 196 F++ GV V V G+ +F+ AQ IH+ T D K ++ SWRD + W R YC+ RCMD VS++T ++ V E++K+IWT GR C+++GCD+P QP NGWFW ++ + ++ +R+ +W P GG+G PQPDNRE G E CVA+LN Y DG+ WHD+ACH +K +CE D Sbjct: 4 FIIAGVCVLSVLSLGSAQFQNGRLEPPNPQLCAQRVIHEKTPDGKGYFFSWRDPQLKGVEEDWLTARNYCRRRCMDSVSLETSLENEWIKQYVVRENVKYIWTSGRLCDFKGCDRPDLQPTNINGWFWTATLQKLAPTTERSQG---DWSPTGGIGLPQPDNREYKQNGASENCVALLNQFYNDGVNWHDVACHHKKSFVCEEND 205
BLAST of PREDICTED: L-selectin vs. nr
Match: gi|1036984757|ref|XP_017076919.1| (PREDICTED: uncharacterized protein LOC108111822 [Drosophila eugracilis]) HSP 1 Score: 157.918 bits (398), Expect = 5.123e-45 Identity = 82/205 (40.00%), Postives = 118/205 (57.56%), Query Frame = 0 Query: 9 FMLFGVVVFIVGVCGNCEFE------------AQ--IHKLTTDRKLHY-SWRDNPDRDFS--WTQGRKYCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCEWGPRGGLGKPQPDNRELYSKGRDEACVAVLNNLYKDGIKWHDIACHQRKFIICESFD 196 F++ GV V V G+ +F+ AQ IH+ T D K ++ SWRD + W R YC+ RCMD VS++T ++ V E++K+IWT GR C+++GCD+P QP NGWFW ++ + ++ +R+ +W P GG+G PQPDNRE G E+CVA+LN Y DG+ WHD+ACH +K +CE D Sbjct: 4 FIIAGVCVLSVLSLGSAQFQNGRLEPPNPQLCAQRVIHEKTPDGKGYFFSWRDPQLKGVEEDWLTARNYCRRRCMDSVSLETSLENEWIKQFVVRENVKYIWTSGRLCDFKGCDRPDLQPTNINGWFWTATLQKLAPTTERSQG---DWSPTGGIGLPQPDNREYKQNGSFESCVALLNQFYNDGVNWHDVACHHKKSFVCEEND 205
BLAST of PREDICTED: L-selectin vs. nr
Match: gi|1036863499|ref|XP_017000427.1| (PREDICTED: uncharacterized protein LOC108059588 [Drosophila takahashii]) HSP 1 Score: 157.532 bits (397), Expect = 5.527e-45 Identity = 81/205 (39.51%), Postives = 118/205 (57.56%), Query Frame = 0 Query: 9 FMLFGVVVFIVGVCGNCEFE------------AQ--IHKLTTDRKLHY-SWRDNPDRDFS--WTQGRKYCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCEWGPRGGLGKPQPDNRELYSKGRDEACVAVLNNLYKDGIKWHDIACHQRKFIICESFD 196 F++ GV V V G+ +F+ AQ IH+ T D K ++ SWRD + W R YC+ RCMD VS++T ++ V E++K+IWT GR C+++GCD+P QP NGWFW ++ + ++ +R+ +W P GG+G PQPDNRE G +E C+A+LN Y DG+ WHD+ACH +K +CE D Sbjct: 4 FIIAGVCVLSVLSLGSAQFQNGRLEPPNPQLCAQRIIHERTPDGKGYFFSWRDPQLKGVEEDWLTARNYCRRRCMDSVSLETSLENEWIKQYVVRENVKYIWTSGRLCDFKGCDRPDLQPTNINGWFWTATLQKLAPTTERSQG---DWSPTGGIGLPQPDNREYKQNGANENCLALLNQFYNDGVNWHDVACHHKKSFVCEEND 205
BLAST of PREDICTED: L-selectin vs. nr
Match: gi|1189059544|ref|XP_020818426.1| (uncharacterized protein LOC110191813 [Drosophila serrata]) HSP 1 Score: 157.532 bits (397), Expect = 5.588e-45 Identity = 81/205 (39.51%), Postives = 117/205 (57.07%), Query Frame = 0 Query: 9 FMLFGVVVFIVGVCGNCEFE------------AQ--IHKLTTDRKLHY-SWRDNPDRDFS--WTQGRKYCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCEWGPRGGLGKPQPDNRELYSKGRDEACVAVLNNLYKDGIKWHDIACHQRKFIICESFD 196 F++ GV V V G+ +F+ AQ IH+ T D K ++ SWRD + W R YC+ RCMD VS++T ++ V E++K+IWT GR C+++GCD+P QP NGWFW ++ + ++ +R+ +W P GG+G PQPDNRE G E C+A+LN Y DG+ WHD+ACH +K +CE D Sbjct: 4 FIIAGVCVLSVLSLGSAQFQNGRLEPPNPQLCAQRIIHEKTPDGKGYFFSWRDPQLKGVEEDWLTARNYCRRRCMDSVSLETSLENEWIKQRVVGENVKYIWTSGRLCDFKGCDRPDLQPTNINGWFWTATLQKLAPTTERSQ---GDWSPTGGIGLPQPDNREFKQNGAPENCLALLNQFYNDGVNWHDVACHHKKSFVCEEND 205
BLAST of PREDICTED: L-selectin vs. nr
Match: gi|751800294|ref|XP_011210145.1| (PREDICTED: uncharacterized protein LOC105230849 [Bactrocera dorsalis] >gi|1098685837|ref|XP_018801396.1| PREDICTED: uncharacterized protein LOC108976625 [Bactrocera latifrons]) HSP 1 Score: 157.147 bits (396), Expect = 8.228e-45 Identity = 73/169 (43.20%), Postives = 106/169 (62.72%), Query Frame = 0 Query: 31 IHKLTTDRKLHY-SWRDNPDRDFS--WTQGRKYCKSRCMDLVSIDTYEMWRTVRSAVEDEDIKFIWTGGRKCNYRGCDQPRFQPAIENGWFWVSSKKSISNPFDRTACTFCEWGPRGGLGKPQPDNRELYSKGRDEACVAVLNNLYKDGIKWHDIACHQRKFIICESFD 196 IH+ T D K ++ SWRD + W GR +C+ RCMDLVS++T ++ V +E++K+IWT GR C+++GCD+P QP NGWFW ++ + ++ +R+ +W P GG+G PQPDNRE G E C+A+LN Y DG+ WHD+ACH +K +CE D Sbjct: 41 IHEKTPDGKGYFFSWRDPQLKGVEEDWLTGRNFCRRRCMDLVSLETSLENEWIKQRVVNENVKYIWTSGRLCDFKGCDRPDLQPTNVNGWFWTATLQKLAPTSERSQ---GDWSPSGGIGLPQPDNREYKQNGAPENCLALLNQFYNDGVNWHDVACHHKKPFVCEEND 206 The following BLAST results are available for this feature:
BLAST of PREDICTED: L-selectin vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 12
Pagesback to top
BLAST of PREDICTED: L-selectin vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of PREDICTED: L-selectin vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold424_size175595:158433..159253- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold424_size175595-snap-gene-0.30 ID=maker-scaffold424_size175595-snap-gene-0.30|Name=PREDICTED: L-selectin|organism=Tigriopus kingsejongensis|type=gene|length=821bp|location=Sequence derived from alignment at scaffold424_size175595:158433..159253- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'PREDICTED: L-selectin' has the following synonyms
Add to Basket
|