von willebrand factor type egf and pentraxin domain-containing protein 1, maker-scaffold203_size261420-snap-gene-0.14 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of von willebrand factor type egf and pentraxin domain-containing protein 1 vs. L. salmonis genes
Match: EMLSAG00000007128 (supercontig:LSalAtl2s:LSalAtl2s402:164410:167018:-1 gene:EMLSAG00000007128 transcript:EMLSAT00000007128 description:"augustus_masked-LSalAtl2s402-processed-gene-1.0") HSP 1 Score: 167.162 bits (422), Expect = 2.084e-45 Identity = 76/142 (53.52%), Postives = 96/142 (67.61%), Query Frame = 0 Query: 68 LMDPLEQMMCPSPVVIPYVDFERIEGWLTSNGAIHGTVLEYSCRVGYRDSRTPCLPTL----------------PFDYCERPPIISHGFIKSNPDDAYHVLSEVHFQCHFGYKMKGSRILKCHATGCWMPNELPECIREDLY 193 L DPLE+ MCPSP +P+ D+ERI G LTSNG +HGTVLEYSC+V YRD+ TPCLPT PF +C +PP ISHGF+ S ++AY V S + + C GY+MKG LKC +TGCW+PN LP+C+R +LY Sbjct: 308 LSDPLEEAMCPSPPPVPHADYERISGLLTSNGVLHGTVLEYSCQVQYRDTSTPCLPTRRTCHAGKWIGRKPTCGPFKFCVQPPTISHGFMLSPAENAYPVYSSIEYGCQSGYRMKGPLTLKCSSTGCWVPNILPQCVRTELY 449
BLAST of von willebrand factor type egf and pentraxin domain-containing protein 1 vs. SwissProt
Match: gi|117316|sp|P19070.1|CR2_MOUSE (RecName: Full=Complement receptor type 2; Short=Cr2; AltName: Full=Complement C3d receptor; AltName: CD_antigen=CD21; Flags: Precursor) HSP 1 Score: 56.9954 bits (136), Expect = 2.261e-7 Identity = 31/94 (32.98%), Postives = 48/94 (51.06%), Query Frame = 0 Query: 121 CLPTLPFDYCERPPIISHGFIKSNPDDAYHVLSEVHFQCHFGYKMKGSRILKCHATGCWMPNELPECIREDLYGTKAAHTVQRGLERLG--ARF 212 CL + P +C P + HG+ + A+ VHF C+ G+ M GS +++CH W+P +P CIR+ G ++ T+ G G ARF Sbjct: 769 CLQSSPLTHCPDPEV-KHGYKLNKTHSAFSHNDIVHFVCNQGFIMNGSHLIRCHTNNTWLPG-VPTCIRKASLGCQSPSTIPNGNHTGGSIARF 860
BLAST of von willebrand factor type egf and pentraxin domain-containing protein 1 vs. nr
Match: gi|1325323050|ref|XP_023343359.1| (sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like [Eurytemora affinis]) HSP 1 Score: 122.094 bits (305), Expect = 5.702e-26 Identity = 55/143 (38.46%), Postives = 83/143 (58.04%), Query Frame = 0 Query: 69 MDPLEQMMCPSPVVIPYVDFERIEGWLTSNGAIHGTVLEYSCRVGYRDSRTPCLPT----------------LPFDYCERPPIISHGFIKSNPDDAYHVLSEVHFQCHFGYKMKGSRILKCHATGCWMPNELPECIREDLYGT 195 ++PL MMC P + Y + +EG +T NGA+HG++LEY+C +GYRD+ PCLP+ PF++C P I +G++ + +D Y + S + + C G+ M G ++C ATGCW PN LP+CI E+L T Sbjct: 332 IEPLSGMMCAVPEDVAYASYRAVEGVVTPNGALHGSILEYNCNIGYRDTILPCLPSRRTCHAGEWIGSLPSCAPFEFCPSVPRIQNGYLATPREDLYRLHSIIKYGCDRGFWMAGVDTMQCQATGCWEPNALPKCIDENLLST 474
BLAST of von willebrand factor type egf and pentraxin domain-containing protein 1 vs. nr
Match: gi|1339052246|ref|XP_023714442.1| (sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like [Cryptotermes secundus]) HSP 1 Score: 85.1149 bits (209), Expect = 7.901e-14 Identity = 47/134 (35.07%), Postives = 59/134 (44.03%), Query Frame = 0 Query: 77 CPSPVVIPYVDFERIEGWLTSNGAIHGTVLEYSCRVGYRDSRTPCLPTL-------------------PFDYCERPPIISHG-FIKSNPDDAYHVLSEVHFQCHFGYKMKGSRILKCHATGCWMPNELPECIRE 190 CP P+ + G +N A GT LE C GYRD+R PC P L P + C PP I HG D YHV EV + C G+ + G +L C +GCW P +LPEC R+ Sbjct: 246 CPRLPAAPHTRAVTLRGRQNANSAAPGTELELRCEPGYRDARLPCQPALLRCEKATWQIVQGALLECIPVEGCVSPPSIEHGSLFGPATDGRYHVHGEVAYACQPGFTLYGYSVLTCAPSGCWEPTDLPECRRD 379
BLAST of von willebrand factor type egf and pentraxin domain-containing protein 1 vs. nr
Match: gi|1330899554|gb|PNF26678.1| (hypothetical protein B7P43_G04783 [Cryptotermes secundus]) HSP 1 Score: 85.1149 bits (209), Expect = 8.323e-14 Identity = 47/134 (35.07%), Postives = 60/134 (44.78%), Query Frame = 0 Query: 77 CPSPVVIPYVDFERIEGWLTSNGAIHGTVLEYSCRVGYRDSRTPCLPTL-------------------PFDYCERPPIISHGFIKSNPDDA-YHVLSEVHFQCHFGYKMKGSRILKCHATGCWMPNELPECIRE 190 CP P+ + G +N A GT LE C GYRD+R PC P L P + C PP I HG + D YHV EV + C G+ + G +L C +GCW P +LPEC R+ Sbjct: 246 CPRLPAAPHTRAVTLRGRQNANSAAPGTELELRCEPGYRDARLPCQPALLRCEKATWQIVQGALLECIPVEGCVSPPSIEHGSLFGPATDGRYHVHGEVAYACQPGFTLYGYSVLTCAPSGCWEPTDLPECRRD 379
BLAST of von willebrand factor type egf and pentraxin domain-containing protein 1 vs. nr
Match: gi|1227957786|ref|XP_021923458.1| (sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like [Zootermopsis nevadensis] >gi|646723278|gb|KDR23943.1| Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 [Zootermopsis nevadensis]) HSP 1 Score: 77.7962 bits (190), Expect = 1.685e-11 Identity = 52/160 (32.50%), Postives = 71/160 (44.38%), Query Frame = 0 Query: 73 EQMMCPSPVVIPYVDFERIEGWLTSNGAIHGTVLEYSCRVGYRDSRTPC------------------LPT-LPFDYCERPPIISHGFIKSNPDDA-YHVLSEVHFQCHFGYKMKGSRILKCHATGCWMPNELPECIRED---LYGTKAAHTVQRGLERLG 209 ++ CP P+ I G +N A GT +E C GYRD R PC +P L + C PP I HG + + YHV EV + C G+ + G +L C +GCW P+ LPEC +D +Y T AH R ++ LG Sbjct: 238 KEAFCPPLPATPHTRVATILGRQNANRAAPGTEVELQCEPGYRDPRFPCQVSVLRCIHSTWHAVQGDIPKCLAVEGCVSPPSIEHGSLFGPATNGRYHVHGEVAYTCQPGFVLHGDPVLTCAPSGCWEPSNLPECRPDDQPKVYWT--AHGPDRKVQPLG 395
BLAST of von willebrand factor type egf and pentraxin domain-containing protein 1 vs. nr
Match: gi|1101342845|ref|XP_018897074.1| (PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like [Bemisia tabaci]) HSP 1 Score: 67.0106 bits (162), Expect = 3.549e-8 Identity = 33/128 (25.78%), Postives = 60/128 (46.88%), Query Frame = 0 Query: 85 YVDFERIEGWLTSNGAIHGTVLEYSCRVGYRDSRTPCLPTL----------------PFDYCERPPIISHGFIKSNP------DDAYHVLSEVHFQCHFGYKMKGSRILKCHATGCWMPNELPECIRE 190 +V F R+EG +N + G++ + C+ GY++ +PC+P + C P +S ++ N ++ + S+V + C GY + G +L C +GCW PN LP+C+ + Sbjct: 264 FVKFTRVEGMQIANNVLSGSMFQAHCQPGYQNVLSPCVPAIFTCNNGVWKGEIPKCEKVTSCVEPVSVSQNGLRFNVPLGTEMSGSFRIGSKVIYDCLPGYILHGEAVLTCSKSGCWEPNALPKCLPQ 391
BLAST of von willebrand factor type egf and pentraxin domain-containing protein 1 vs. nr
Match: gi|1069780195|ref|XP_018320949.1| (PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like [Agrilus planipennis]) HSP 1 Score: 65.0846 bits (157), Expect = 1.598e-7 Identity = 51/183 (27.87%), Postives = 81/183 (44.26%), Query Frame = 0 Query: 78 PSPVVIPYVDFERIEGWLTSNGAIHGTVLEYSCRVGYRDSRTPC----------------LPT-LPFDYCERPPIISHGFIK------SNPDDAYH--VLSEVHFQCHFGYKMKGSRILKCHATGCWMPNELPECIREDLYGTKAAHTVQRGLERL-GARFLEQPFIQSSSKENDDVALICGQ 234 P+P+ IP+ I G+ S AI GT +E C YR+++TPC LPT +P C PP++ H I + PD H + + + +QC GY+ +G+ + +C GCW P+ P C + Y + + + + GA L FI +A+IC + Sbjct: 238 PAPL-IPHTITTIISGFHNSEMAIAGTEMEVRCIPKYRNNKTPCSLSTKIRCVNGRWLGDLPTCVPAKDCLPPPVVPHAHIWYINNFFAEPDKISHYPIHARIAYQCWPGYEPEGNSVAECSNDGCWSPSTPPVCKKSLKYLIQMGNAGSTVISMVTGAGILVLLFIAC-------LAVICSR 412
BLAST of von willebrand factor type egf and pentraxin domain-containing protein 1 vs. nr
Match: gi|1004400542|gb|EFA02872.2| (hypothetical protein TcasGA2_TC007906 [Tribolium castaneum]) HSP 1 Score: 64.6994 bits (156), Expect = 2.950e-7 Identity = 37/147 (25.17%), Postives = 66/147 (44.90%), Query Frame = 0 Query: 70 DPLEQ---MMCPSPVVIPYVDFERIEGWLTSNGAIHGTVLEYSCRVGYRDSRTPCLP----------------TLPFDYCERPPIISHGFIKSNPDD--------AYHVLSEVHFQCHFGYKMKGSRILKCHATGCWMPNELPECIR 189 DP E + CP+ + + I+G+ + + A+ GTV++ C Y+++R PC P + C+ PP + + I + + Y + S++ +QC GY ++G+ + C GCW+P E P C R Sbjct: 784 DPFEDPTDLPCPAAPTVLHSTTTVIQGYQSKSLALAGTVIQIHCIHKYKNARAPCQPGKLRCMGGRWVGVKPICVQAHGCDPPPGVLYADIYNLSQELHDVAFTSKYPIKSQITYQCLPGYTLQGNEVFSCAQGGCWLPAEPPTCYR 930
BLAST of von willebrand factor type egf and pentraxin domain-containing protein 1 vs. nr
Match: gi|642919333|ref|XP_008191829.1| (PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 [Tribolium castaneum]) HSP 1 Score: 63.1586 bits (152), Expect = 6.953e-7 Identity = 42/166 (25.30%), Postives = 73/166 (43.98%), Query Frame = 0 Query: 53 LDDGRQFWRNR-----RLIRLMDPLEQMMCPSPVVIPYVDFERIEGWLTSNGAIHGTVLEYSCRVGYRDSRTPCLP----------------TLPFDYCERPPIISHGFIKSNPDD--------AYHVLSEVHFQCHFGYKMKGSRILKCHATGCWMPNELPECIR 189 LDDG W + L DP + + CP+ + + I+G+ + + A+ GTV++ C Y+++R PC P + C+ PP + + I + + Y + S++ +QC GY ++G+ + C GCW+P E P C R Sbjct: 198 LDDGT--WSPKIPPVCSLQTAEDPTD-LPCPAAPTVLHSTTTVIQGYQSKSLALAGTVIQIHCIHKYKNARAPCQPGKLRCMGGRWVGVKPICVQAHGCDPPPGVLYADIYNLSQELHDVAFTSKYPIKSQITYQCLPGYTLQGNEVFSCAQGGCWLPAEPPTCYR 360 The following BLAST results are available for this feature:
BLAST of von willebrand factor type egf and pentraxin domain-containing protein 1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of von willebrand factor type egf and pentraxin domain-containing protein 1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 1
BLAST of von willebrand factor type egf and pentraxin domain-containing protein 1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 8
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold203_size261420:21322..25554- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold203_size261420-snap-gene-0.14 ID=maker-scaffold203_size261420-snap-gene-0.14|Name=von willebrand factor type egf and pentraxin domain-containing protein 1|organism=Tigriopus kingsejongensis|type=gene|length=4233bp|location=Sequence derived from alignment at scaffold203_size261420:21322..25554- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'von willebrand factor type egf and pentraxin domain-containing protein 1' has the following synonyms
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