Tk05457, Tk05457 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk05457
Unique NameTk05457
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length280
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007866TRIC channelPFAMPF05197TRICcoord: 45..235
e-value: 4.6E-77
score: 257.8
IPR007866TRIC channelPANTHERPTHR12454TRIMERIC INTRACELLULAR CATION CHANNELcoord: 6..262
NoneNo IPR availablePANTHERPTHR12454:SF17SUBFAMILY NOT NAMEDcoord: 6..262
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..77
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 167..214
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 78..88
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 267..280
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 89..106
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 247..266
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 236..246
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 107..147
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 148..166
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..39
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..58
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 215..235
NoneNo IPR availableTMHMMTMhelixcoord: 56..78
NoneNo IPR availableTMHMMTMhelixcoord: 91..113
NoneNo IPR availableTMHMMTMhelixcoord: 247..266
NoneNo IPR availableTMHMMTMhelixcoord: 215..237

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold224_size251237-snap-gene-1.53-mRNA-1maker-scaffold224_size251237-snap-gene-1.53-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk05457 ID=Tk05457|Name=Tk05457|organism=Tigriopus kingsejongensis|type=polypeptide|length=280bp
MWLSIMDPEKFLDLANQVTKLKMYPYFDFAHSVMCLLMIREELSTGAVEF
SRRHPFSCWMSSMAVIFSGSLLANLMMGEPMLSPFKNNNALLVATLAWYV
VFYLPFDVGFTVFKSMPMRVVCAGLKEVYRAKKVHDGVSHAAKMFPNAYL
IMIFIGAVKGSGESFIRVGERLIRGVWTPEAIEFLRPSVDTKACLVASLI
FVLDKKTDLISAPHALVYFGIVIFFVYFKMSAILLGLGDPFMPFENIISA
VFLGGIMDSILNTFYGRKSEDGDEKKGGRI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007866TRIC_channel
Vocabulary: Biological Process
TermDefinition
GO:0015672monovalent inorganic cation transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005261cation channel activity
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